Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055365 17 3301 NP_061152 17 4312 NP_891847 17 4312 XP_006716112 17 4312 XP_005250550 17 4312 NP_597677 16 5631 NP_056199 16 5631 XP_005248340 16 5631 XP_005248339 16 5631 XP_005248337 16 5631 XP_006714531 16 5631 XP_006714530 16 5631 NP_000123 16 7355 NP_001013859 16 7355 NP_001184033 16 7355 NP_001013858 16 7355 NP_005924 16 7355 NP_003541 16 7355 NP_057427 16 7355 NP_006551 16 7355 NP_941989 16 7355 NP_001020767 16 7355 XP_006718194 16 7355 XP_006718193 16 7355 XP_006718192 16 7355 XP_006718191 16 7355 XP_006718190 16 7355 XP_005252813 16 7355 XP_005252812 16 7355 XP_006718189 16 7355 XP_006718188 16 7355 XP_006718187 16 7355 XP_005252811 16 7355 XP_006718186 16 7355 XP_006718185 16 7355 XP_005249935 16 7355 XP_005249934 16 7355 XP_006715851 16 7355 XP_005249933 16 7355 NP_079184 15 9605 NP_001161413 15 9605 NP_001138462 15 9605 NP_001099129 15 9605 NP_056052 15 9605 XP_005254738 15 9605 XP_005254737 15 9605 XP_006710416 15 9605 XP_006710415 15 9605 XP_005270511 15 9605>NP_055365 Length = 1032 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 EKNSAVL 9 EKNSAVL Sbjct: 219 EKNSAVL 225>NP_061152 Length = 1858 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSEKNSAVL 9 L E+NSA+L Sbjct: 824 LEEENSAIL 832>NP_891847 Length = 1858 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSEKNSAVL 9 L E+NSA+L Sbjct: 824 LEEENSAIL 832>XP_006716112 Length = 1816 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSEKNSAVL 9 L E+NSA+L Sbjct: 824 LEEENSAIL 832>XP_005250550 Length = 1858 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSEKNSAVL 9 L E+NSA+L Sbjct: 824 LEEENSAIL 832>NP_597677 Length = 2804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSEKNSAV 8 LS+KNS+V Sbjct: 2220 LSDKNSSV 2227>NP_056199 Length = 2697 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSEKNSAV 8 LS+KNS+V Sbjct: 2220 LSDKNSSV 2227>XP_005248340 Length = 2265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSEKNSAV 8 LS+KNS+V Sbjct: 1681 LSDKNSSV 1688>XP_005248339 Length = 2584 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSEKNSAV 8 LS+KNS+V Sbjct: 2000 LSDKNSSV 2007>XP_005248337 Length = 2698 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSEKNSAV 8 LS+KNS+V Sbjct: 2220 LSDKNSSV 2227>XP_006714531 Length = 2738 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSEKNSAV 8 LS+KNS+V Sbjct: 2154 LSDKNSSV 2161>XP_006714530 Length = 2755 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSEKNSAV 8 LS+KNS+V Sbjct: 2220 LSDKNSSV 2227>NP_000123 Length = 2351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSEKNSAVL 9 LSEKN V+ Sbjct: 1163 LSEKNKVVV 1171>NP_001013859 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEKNSAV 8 L +KNSAV Sbjct: 348 LKDKNSAV 355>NP_001184033 Length = 3972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SEKNSAVL 9 S++NSA+L Sbjct: 183 SDRNSAIL 190>NP_001013858 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEKNSAV 8 L +KNSAV Sbjct: 348 LKDKNSAV 355>NP_005924 Length = 3969 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SEKNSAVL 9 S++NSA+L Sbjct: 183 SDRNSAIL 190>NP_003541 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEKNSAV 8 L +KNSAV Sbjct: 348 LKDKNSAV 355>NP_057427 Length = 3114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEKNSAVL 9 S KNSA+L Sbjct: 821 SPKNSAIL 828>NP_006551 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 99 SEKNNAV 105>NP_941989 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 99 SEKNNAV 105>NP_001020767 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 99 SEKNNAV 105>XP_006718194 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 99 SEKNNAV 105>XP_006718193 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 99 SEKNNAV 105>XP_006718192 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 99 SEKNNAV 105>XP_006718191 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 99 SEKNNAV 105>XP_006718190 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 126 SEKNNAV 132>XP_005252813 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 126 SEKNNAV 132>XP_005252812 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 135 SEKNNAV 141>XP_006718189 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 135 SEKNNAV 141>XP_006718188 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 135 SEKNNAV 141>XP_006718187 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 135 SEKNNAV 141>XP_005252811 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 135 SEKNNAV 141>XP_006718186 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 135 SEKNNAV 141>XP_006718185 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SEKNSAV 8 SEKN+AV Sbjct: 135 SEKNNAV 141>XP_005249935 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEKNSAV 8 L +KNSAV Sbjct: 301 LKDKNSAV 308>XP_005249934 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEKNSAV 8 L +KNSAV Sbjct: 301 LKDKNSAV 308>XP_006715851 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEKNSAV 8 L +KNSAV Sbjct: 348 LKDKNSAV 355>XP_005249933 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEKNSAV 8 L +KNSAV Sbjct: 348 LKDKNSAV 355>NP_079184 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSEKNS 6 LSEKNS Sbjct: 70 LSEKNS 75>NP_001161413 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSEKNS 6 LSEKNS Sbjct: 6 LSEKNS 11>NP_001138462 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSEKNSAVL 9 LSE SAVL Sbjct: 1197 LSEDQSAVL 1205>NP_001099129 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EKNSAVL 9 EKN AVL Sbjct: 539 EKNEAVL 545>NP_056052 Length = 1354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSEKNS 6 LSEKNS Sbjct: 768 LSEKNS 773>XP_005254738 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSEKNS 6 LSEKNS Sbjct: 70 LSEKNS 75>XP_005254737 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSEKNS 6 LSEKNS Sbjct: 6 LSEKNS 11>XP_006710416 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EKNSAVL 9 EKN AVL Sbjct: 219 EKNEAVL 225>XP_006710415 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EKNSAVL 9 EKN AVL Sbjct: 219 EKNEAVL 225>XP_005270511 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EKNSAVL 9 EKN AVL Sbjct: 219 EKNEAVL 225Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.112 0.244 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 429,074 Number of extensions: 437 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |