Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243000 17 3301 XP_005257603 17 3301 XP_006722058 17 3301 XP_005257602 17 3301 NP_001137357 17 4312 NP_001137358 17 4312 NP_001231921 17 4312 NP_001231919 17 4312 NP_002471 17 4312 XP_005268950 17 4312 XP_005268949 17 4312 XP_005268948 17 4312 XP_005268946 17 4312 XP_005268944 17 4312 XP_005268945 17 4312 XP_005268943 17 4312 XP_005268942 17 4312 NP_758954 16 5631 NP_001245140 16 5631 NP_689496 16 5631 NP_001166109 16 5631 XP_005266021 16 5631 XP_006714968 16 5631 XP_005266020 16 5631 NP_000660 16 7355 NP_115956 16 7355 NP_004221 16 7355 XP_006722999 16 7355 NP_001254537 15 9605 NP_006580 15 9605 NP_937995 15 9605 XP_005276798 15 9605 XP_006726273 15 9605 XP_005276797 15 9605 XP_006726272 15 9605 XP_005276795 15 9605 XP_005244905 15 9605 XP_006711190 15 9605 XP_005244904 15 9605 XP_006711189 15 9605 XP_005244902 15 9605>NP_001243000 Length = 5207 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RSSSSLRT 9 RSSS+LRT Sbjct: 2109 RSSSALRT 2116>XP_005257603 Length = 5256 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RSSSSLRT 9 RSSS+LRT Sbjct: 2158 RSSSALRT 2165>XP_006722058 Length = 5256 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RSSSSLRT 9 RSSS+LRT Sbjct: 2158 RSSSALRT 2165>XP_005257602 Length = 5256 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RSSSSLRT 9 RSSS+LRT Sbjct: 2158 RSSSALRT 2165>NP_001137357 Length = 1030 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>NP_001137358 Length = 943 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 430 RDSSSLRT 437>NP_001231921 Length = 974 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>NP_001231919 Length = 995 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>NP_002471 Length = 1030 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>XP_005268950 Length = 931 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>XP_005268949 Length = 987 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>XP_005268948 Length = 990 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>XP_005268946 Length = 999 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>XP_005268944 Length = 1005 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>XP_005268945 Length = 1005 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>XP_005268943 Length = 1034 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>XP_005268942 Length = 1046 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSSSSLRT 9 R SSSLRT Sbjct: 517 RDSSSLRT 524>NP_758954 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSSSSLR 8 RSSSSLR Sbjct: 200 RSSSSLR 206>NP_001245140 Length = 280 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSSSSLR 8 RSSSSLR Sbjct: 188 RSSSSLR 194>NP_689496 Length = 867 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSSSSLR 8 RSSSSLR Sbjct: 146 RSSSSLR 152>NP_001166109 Length = 900 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSSSSLR 8 RSSSSLR Sbjct: 179 RSSSSLR 185>XP_005266021 Length = 786 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSSSSLR 8 RSSSSLR Sbjct: 179 RSSSSLR 185>XP_006714968 Length = 804 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSSSSLR 8 RSSSSLR Sbjct: 179 RSSSSLR 185>XP_005266020 Length = 835 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSSSSLR 8 RSSSSLR Sbjct: 179 RSSSSLR 185>NP_000660 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRSSSSLRT 9 LRS S+RT Sbjct: 363 LRSGKSIRT 371>NP_115956 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRSSSSLR 8 +RS+SSLR Sbjct: 423 MRSASSLR 430>NP_004221 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRSSSSL 7 LRSSSSL Sbjct: 328 LRSSSSL 334>XP_006722999 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRSSSSL 7 LRSSSSL Sbjct: 328 LRSSSSL 334>NP_001254537 Length = 650 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 615 LSSSSSLR 622>NP_006580 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 633 LSSSSSLR 640>NP_937995 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 537 LSSSSSLR 544>XP_005276798 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 362 LSSSSSLR 369>XP_006726273 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 452 LSSSSSLR 459>XP_005276797 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 538 LSSSSSLR 545>XP_006726272 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 557 LSSSSSLR 564>XP_005276795 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 634 LSSSSSLR 641>XP_005244905 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 362 LSSSSSLR 369>XP_006711190 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 452 LSSSSSLR 459>XP_005244904 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 538 LSSSSSLR 545>XP_006711189 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 557 LSSSSSLR 564>XP_005244902 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LRSSSSLR 8 L SSSSLR Sbjct: 634 LSSSSSLR 641Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.108 0.235 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 323,150 Number of extensions: 357 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |