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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_476506                                                              17    4312
NP_004360                                                              17    4312
NP_476508                                                              17    4312
NP_001268695                                                           17    4312
NP_872272                                                              17    4312
NP_004430                                                              17    4312
NP_001268694                                                           17    4312
NP_001268696                                                           17    4312
XP_005265710                                                           17    4312
XP_005246122                                                           17    4312
XP_006712316                                                           17    4312
NP_112224                                                              16    5631
XP_005253212                                                           16    5631
XP_005253211                                                           16    5631
NP_000293                                                              16    7355
NP_998767                                                              16    7355
XP_005258306                                                           16    7355
NP_001276                                                              16    7355
NP_689560                                                              15    9605

>NP_476506
          Length = 1237

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+QASV+ F
Sbjct: 163 LKQASVFSF 171



>NP_004360
          Length = 3177

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+QASV+ F
Sbjct: 369 LKQASVFSF 377



>NP_476508
          Length = 2971

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+QASV+ F
Sbjct: 163 LKQASVFSF 171



>NP_001268695
          Length = 1016

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+ ASVY+F
Sbjct: 530 LKPASVYVF 538



>NP_872272
          Length = 1015

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+ ASVY+F
Sbjct: 530 LKPASVYVF 538



>NP_004430
          Length = 1037

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+ ASVY+F
Sbjct: 530 LKPASVYVF 538



>NP_001268694
          Length = 1038

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+ ASVY+F
Sbjct: 530 LKPASVYVF 538



>NP_001268696
          Length = 1004

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+ ASVY+F
Sbjct: 530 LKPASVYVF 538



>XP_005265710
          Length = 874

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+ ASVY+F
Sbjct: 366 LKPASVYVF 374



>XP_005246122
          Length = 2977

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+QASV+ F
Sbjct: 369 LKQASVFSF 377



>XP_006712316
          Length = 3010

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRQASVYMF 9
           L+QASV+ F
Sbjct: 369 LKQASVFSF 377



>NP_112224
          Length = 1849

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    RQASVYMF 9
            RQA++Y+F
Sbjct: 1312 RQAALYIF 1319



>XP_005253212
          Length = 1838

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    RQASVYMF 9
            RQA++Y+F
Sbjct: 1301 RQAALYIF 1308



>XP_005253211
          Length = 1881

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    RQASVYMF 9
            RQA++Y+F
Sbjct: 1344 RQAALYIF 1351



>NP_000293
          Length = 727

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LRQASVYMF 9
           +RQ  V+MF
Sbjct: 487 IRQQDVFMF 495



>NP_998767
          Length = 328

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   QASVYMF 9
           +ASVY+F
Sbjct: 247 EASVYLF 253



>XP_005258306
          Length = 174

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  QASVYMF 9
          +ASVY+F
Sbjct: 93 EASVYLF 99



>NP_001276
          Length = 914

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  QASVYMF 9
          QAS+Y+F
Sbjct: 59 QASLYLF 65



>NP_689560
          Length = 973

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   RQASVYM 8
           RQA VYM
Sbjct: 918 RQAVVYM 924



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.345    0.140    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 333,792
Number of extensions: 339
Number of successful extensions: 19
Number of sequences better than 10000.0: 19
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 19
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.8 bits)
S2: 28 (15.4 bits)