Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_001263627 19 665 NP_001263628 19 665 NP_001263626 19 665 NP_001191121 17 3301 NP_001119713 17 3301 NP_001191117 17 3301 NP_001119712 17 3301 NP_001119714 17 3301 NP_005418 17 3301 NP_001191116 17 3301 NP_001191115 17 3301 NP_001191119 17 3301 NP_001191113 17 3301 NP_001191118 17 3301 NP_001191120 17 3301 NP_001191114 17 3301 NP_001108451 17 4312 NP_001108454 17 4312 NP_003713 17 4312 NP_001108450 17 4312 NP_001108452 17 4312 NP_001108453 17 4312 NP_038475 17 4312 NP_001258949 17 4312 NP_115960 17 4312 NP_001257981 17 4312 NP_001276087 17 4312 XP_005259943 17 4312 XP_005259942 17 4312 XP_005259941 17 4312 XP_006720385 17 4312 XP_005268275 17 4312 XP_005247903 17 4312 XP_005247901 17 4312 XP_005247900 17 4312 XP_005270768 17 4312 NP_036448 17 4312 NP_001276088 17 4312 NP_999875 16 5631 NP_005229 16 7355 NP_001175 16 7355 NP_001155894 16 7355 XP_006716946 16 7355 NP_004722 15 9605 NP_001257552 15 9605 NP_001257551 15 9605 NP_001013597 15 9605 NP_055463 15 9605 NP_115677 15 9605 XP_005260153 15 9605 XP_006719756 15 9605 XP_005269288 15 9605 XP_005247976 15 9605 XP_005247975 15 9605 XP_005247974 15 9605 XP_005247973 15 9605 XP_005247972 15 9605 XP_005247971 15 9605 NP_067081 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 249 RPILTIIT 256>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 210 RPILTIIT 217>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 249 RPILTIIT 256>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 249 RPILTIIT 256>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 210 RPILTIIT 217>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 210 RPILTIIT 217>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 210 RPILTIIT 217>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 249 RPILTIIT 256>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 210 RPILTIIT 217>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 117 RPILTIIT 124>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 117 RPILTIIT 124>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 117 RPILTIIT 124>NP_001263627 Length = 182 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 90 RPILTIIT 97>NP_001263628 Length = 187 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 90 RPILTIIT 97>NP_001263626 Length = 234 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RPILTIIT 9 RPILTIIT Sbjct: 90 RPILTIIT 97>NP_001191121 Length = 565 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 198 RPILIIIT 205>NP_001119713 Length = 450 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 220 RPILIIIT 227>NP_001191117 Length = 540 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 269 RPILIIIT 276>NP_001119712 Length = 587 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 220 RPILIIIT 227>NP_001119714 Length = 426 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 220 RPILIIIT 227>NP_005418 Length = 636 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 269 RPILIIIT 276>NP_001191116 Length = 555 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 269 RPILIIIT 276>NP_001191115 Length = 403 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 269 RPILIIIT 276>NP_001191119 Length = 506 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 220 RPILIIIT 227>NP_001191113 Length = 499 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 269 RPILIIIT 276>NP_001191118 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 220 RPILIIIT 227>NP_001191120 Length = 491 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 220 RPILIIIT 227>NP_001191114 Length = 475 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL IIT Sbjct: 269 RPILIIIT 276>NP_001108451 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL I+T Sbjct: 319 RPILIIVT 326>NP_001108454 Length = 393 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL I+T Sbjct: 225 RPILIIVT 232>NP_003713 Length = 680 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL I+T Sbjct: 319 RPILIIVT 326>NP_001108450 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL I+T Sbjct: 319 RPILIIVT 326>NP_001108452 Length = 586 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL I+T Sbjct: 225 RPILIIVT 232>NP_001108453 Length = 461 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL I+T Sbjct: 225 RPILIIVT 232>NP_038475 Length = 823 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PILTIIT 9 P+LT+IT Sbjct: 534 PVLTVIT 540>NP_001258949 Length = 637 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RPILTII 8 RP+LTII Sbjct: 362 RPLLTII 368>NP_115960 Length = 652 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PILTIIT 9 P+LT+IT Sbjct: 354 PVLTVIT 360>NP_001257981 Length = 765 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PILTIIT 9 P+LT+IT Sbjct: 476 PVLTVIT 482>NP_001276087 Length = 600 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PILTIIT 9 P+LT+IT Sbjct: 302 PVLTVIT 308>XP_005259943 Length = 551 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PILTIIT 9 P+LT+IT Sbjct: 262 PVLTVIT 268>XP_005259942 Length = 834 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PILTIIT 9 P+LT+IT Sbjct: 545 PVLTVIT 551>XP_005259941 Length = 892 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PILTIIT 9 P+LT+IT Sbjct: 603 PVLTVIT 609>XP_006720385 Length = 1683 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RPILTII 8 RP+LTII Sbjct: 1408 RPLLTII 1414>XP_005268275 Length = 1684 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RPILTII 8 RP+LTII Sbjct: 1409 RPLLTII 1415>XP_005247903 Length = 483 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL I+T Sbjct: 319 RPILIIVT 326>XP_005247901 Length = 663 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL I+T Sbjct: 302 RPILIIVT 309>XP_005247900 Length = 676 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RPIL I+T Sbjct: 319 RPILIIVT 326>XP_005270768 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRPILTIIT 9 L P+LT++T Sbjct: 241 LNPLLTLLT 249>NP_036448 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRPILTIIT 9 L P+LT++T Sbjct: 211 LNPLLTLLT 219>NP_001276088 Length = 526 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PILTIIT 9 P+LT+IT Sbjct: 228 PVLTVIT 234>NP_999875 Length = 283 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RPILTIIT 9 RP+LT+ T Sbjct: 10 RPLLTVAT 17>NP_005229 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRPILTII 8 L+P LTII Sbjct: 7 LKPTLTII 14>NP_001175 Length = 2644 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LRPILT 6 LRPILT Sbjct: 2386 LRPILT 2391>NP_001155894 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRPILTII 8 L+P LTII Sbjct: 7 LKPTLTII 14>XP_006716946 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRPILTII 8 LRPI TI+ Sbjct: 212 LRPIPTIV 219>NP_004722 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRPILTII 8 L+P LTII Sbjct: 128 LQPALTII 135>NP_001257552 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRPILTII 8 L+P LTII Sbjct: 128 LQPALTII 135>NP_001257551 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRPILTII 8 L+P LTII Sbjct: 128 LQPALTII 135>NP_001013597 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RPILTII 8 RPI+T++ Sbjct: 272 RPIVTVV 278>NP_055463 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>NP_115677 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RPILTII 8 RP+LT++ Sbjct: 308 RPVLTLL 314>XP_005260153 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RPILTII 8 RP+LT++ Sbjct: 145 RPVLTLL 151>XP_006719756 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRPILTII 8 L+P LTII Sbjct: 128 LQPALTII 135>XP_005269288 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRPILTII 8 L+P LTII Sbjct: 128 LQPALTII 135>XP_005247976 Length = 1002 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 771 RPILTV 776>XP_005247975 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>XP_005247974 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>XP_005247973 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>XP_005247972 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>XP_005247971 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>NP_067081 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRPILTIIT 9 +R +LTI+T Sbjct: 1 MRTLLTILT 9Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.158 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 558,118 Number of extensions: 1037 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |