Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055726 18 1482 NP_005124 18 1935 NP_001265105 17 2528 NP_653314 17 3301 XP_006712016 17 3301 NP_002891 16 5631 NP_689646 16 5631 NP_940841 16 5631 NP_001135758 16 5631 NP_005348 16 5631 NP_079175 16 5631 NP_078900 16 5631 NP_001258918 16 5631 NP_073606 16 5631 NP_001036039 16 5631 XP_005258998 16 5631 XP_006723281 16 5631 XP_005258997 16 5631 XP_005258996 16 5631 XP_005258995 16 5631 XP_006722420 16 5631 XP_006722419 16 5631 XP_005258207 16 5631 XP_005258206 16 5631 XP_005255025 16 5631 XP_006718830 16 5631 XP_006717138 16 5631 XP_005262685 16 5631 NP_542410 16 7355 NP_542411 16 7355 NP_542412 16 7355 NP_001269675 16 7355 NP_002286 16 7355 NP_001012321 16 7355 NP_001276086 16 7355 NP_002426 16 7355 NP_001269674 16 7355 NP_001276084 16 7355 NP_001268916 16 7355 NP_775104 16 7355 NP_001275743 16 7355 NP_115826 16 7355 NP_001269588 16 7355 NP_060414 16 7355 NP_653170 16 7355 XP_005253054 16 7355 XP_005252438 16 7355 XP_005252437 16 7355 XP_006716699 16 7355 XP_006716698 16 7355 XP_006716697 16 7355 XP_006716696 16 7355 XP_006716695 16 7355 XP_006716694 16 7355 XP_006716693 16 7355 XP_006716692 16 7355 XP_006716691 16 7355 XP_006716690 16 7355 XP_006716689 16 7355 XP_006711092 16 7355 XP_006711091 16 7355 NP_001136272 15 9605 NP_001252516 15 9605 NP_001239312 15 9605 NP_060224 15 9605 NP_004438 15 9605 XP_006719120 15 9605 XP_005253397 15 9605 XP_005253396 15 9605 XP_006715189 15 9605 XP_006715188 15 9605 NP_789795 15 9605>NP_055726 Length = 961 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 L LLSVSDP Sbjct: 770 LPLLSVSDP 778>NP_005124 Length = 329 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 LRLLSVS P Sbjct: 9 LRLLSVSRP 17>NP_001265105 Length = 768 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 L+LLS SDP Sbjct: 25 LKLLSSSDP 33>NP_653314 Length = 573 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLLSVS P Sbjct: 63 RLLSVSSP 70>XP_006712016 Length = 593 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLLSVS P Sbjct: 63 RLLSVSSP 70>NP_002891 Length = 1247 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSVSDP 9 +LS+SDP Sbjct: 61 ILSISDP 67>NP_689646 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRLLSVSD 8 L+LLS+SD Sbjct: 155 LQLLSISD 162>NP_940841 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRLLSVSD 8 L+LLS+SD Sbjct: 155 LQLLSISD 162>NP_001135758 Length = 1091 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 +R+L +SDP Sbjct: 1062 IRILRMSDP 1070>NP_005348 Length = 1076 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLLS+ DP Sbjct: 766 RLLSLMDP 773>NP_079175 Length = 659 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSVSDP 9 +LS+SDP Sbjct: 185 MLSISDP 191>NP_078900 Length = 1091 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 +R+L +SDP Sbjct: 1062 IRILRMSDP 1070>NP_001258918 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSVSDP 9 +LS+SDP Sbjct: 110 MLSISDP 116>NP_073606 Length = 619 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 LRL S+S+P Sbjct: 364 LRLFSLSNP 372>NP_001036039 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 LRL S+S+P Sbjct: 364 LRLFSLSNP 372>XP_005258998 Length = 775 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLLS+ DP Sbjct: 465 RLLSLMDP 472>XP_006723281 Length = 775 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLLS+ DP Sbjct: 465 RLLSLMDP 472>XP_005258997 Length = 775 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLLS+ DP Sbjct: 465 RLLSLMDP 472>XP_005258996 Length = 786 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLLS+ DP Sbjct: 476 RLLSLMDP 483>XP_005258995 Length = 821 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLLS+ DP Sbjct: 511 RLLSLMDP 518>XP_006722420 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSVSDP 9 +LS+SDP Sbjct: 7 MLSISDP 13>XP_006722419 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSVSDP 9 +LS+SDP Sbjct: 7 MLSISDP 13>XP_005258207 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSVSDP 9 +LS+SDP Sbjct: 7 MLSISDP 13>XP_005258206 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLSVSDP 9 +LS+SDP Sbjct: 185 MLSISDP 191>XP_005255025 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 LRL S+S+P Sbjct: 363 LRLFSLSNP 371>XP_006718830 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRLLSVSD 8 L+LLS+SD Sbjct: 155 LQLLSISD 162>XP_006717138 Length = 820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RLLSVSDP 9 RLL V DP Sbjct: 4 RLLKVGDP 11>XP_005262685 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 +R+L +SDP Sbjct: 1084 IRILRMSDP 1092>NP_542410 Length = 1629 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRLLSVS 7 LRLLSVS Sbjct: 1533 LRLLSVS 1539>NP_542411 Length = 1736 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRLLSVS 7 LRLLSVS Sbjct: 1640 LRLLSVS 1646>NP_542412 Length = 1650 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRLLSVS 7 LRLLSVS Sbjct: 1554 LRLLSVS 1560>NP_001269675 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 +RLLS DP Sbjct: 156 IRLLSSPDP 164>NP_002286 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLL V+DP Sbjct: 120 RLLVVTDP 127>NP_001012321 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLL V+DP Sbjct: 120 RLLVVTDP 127>NP_001276086 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLL+ SDP Sbjct: 29 RLLASSDP 36>NP_002426 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLL+ SDP Sbjct: 29 RLLASSDP 36>NP_001269674 Length = 865 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 +RLLS DP Sbjct: 156 IRLLSSPDP 164>NP_001276084 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLLSVSDP 9 RLL+ SDP Sbjct: 29 RLLASSDP 36>NP_001268916 Length = 1203 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLSVSDP 9 LLSV DP Sbjct: 237 LLSVGDP 243>NP_775104 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 +RLLS DP Sbjct: 156 IRLLSSPDP 164>NP_001275743 Length = 1632 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>NP_115826 Length = 1641 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>NP_001269588 Length = 1355 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRLLSVS 7 LRLLSVS Sbjct: 751 LRLLSVS 757>NP_060414 Length = 1287 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRLLSVS 7 LRLLSVS Sbjct: 683 LRLLSVS 689>NP_653170 Length = 1216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLSVSDP 9 LLSV DP Sbjct: 237 LLSVGDP 243>XP_005253054 Length = 1375 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRLLSVS 7 LRLLSVS Sbjct: 771 LRLLSVS 777>XP_005252438 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 +RLLS DP Sbjct: 68 IRLLSSPDP 76>XP_005252437 Length = 807 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 +RLLS DP Sbjct: 156 IRLLSSPDP 164>XP_006716699 Length = 1147 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>XP_006716698 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>XP_006716697 Length = 1578 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>XP_006716696 Length = 1585 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 493 LRLLSVLHP 501>XP_006716695 Length = 1585 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 493 LRLLSVLHP 501>XP_006716694 Length = 1632 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>XP_006716693 Length = 1644 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>XP_006716692 Length = 1644 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>XP_006716691 Length = 1653 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>XP_006716690 Length = 1653 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>XP_006716689 Length = 1653 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRLLSV P Sbjct: 561 LRLLSVLHP 569>XP_006711092 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLSVSDP 9 LLSV DP Sbjct: 237 LLSVGDP 243>XP_006711091 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLSVSDP 9 LLSV DP Sbjct: 237 LLSVGDP 243>NP_001136272 Length = 3144 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LSVSDP 9 LS+SDP Sbjct: 2692 LSISDP 2697>NP_001252516 Length = 157 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 L+LLS S+P Sbjct: 75 LKLLSSSNP 83>NP_001239312 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 L+LLS S+P Sbjct: 41 LKLLSSSNP 49>NP_060224 Length = 1440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRL ++DP Sbjct: 164 LRLTRITDP 172>NP_004438 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 LR++S +DP Sbjct: 199 LRMISNADP 207>XP_006719120 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 LR++S +DP Sbjct: 199 LRMISNADP 207>XP_005253397 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 LR++S +DP Sbjct: 199 LRMISNADP 207>XP_005253396 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 LR++S +DP Sbjct: 210 LRMISNADP 218>XP_006715189 Length = 1240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRL ++DP Sbjct: 164 LRLTRITDP 172>XP_006715188 Length = 1400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRLLSVSDP 9 LRL ++DP Sbjct: 164 LRLTRITDP 172>NP_789795 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRLLSVSDP 9 L+LLS S+P Sbjct: 104 LKLLSSSNP 112Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.140 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 482,519 Number of extensions: 924 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |