Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_598328 17 3301 NP_001129246 17 3301 NP_008881 17 3301 XP_005276380 17 3301 XP_005251180 17 3301 XP_006713376 17 3301 XP_006713375 17 3301 XP_005276078 17 3301 NP_003481 17 3301 NP_071904 17 4312 XP_005266561 17 4312 XP_005266560 17 4312 XP_005266559 17 4312 NP_001138537 16 5631 NP_653294 16 7355 NP_001273424 16 7355 NP_062546 16 7355 XP_005259813 16 7355 XP_005259812 16 7355 XP_006720675 16 7355 XP_006720674 16 7355 XP_006720672 16 7355 XP_005254605 16 7355 XP_005254604 16 7355 NP_058649 15 9605 NP_060136 15 9605 NP_001254708 15 9605 NP_001186548 15 9605 NP_001116314 15 9605 NP_861447 15 9605 NP_001186550 15 9605 NP_001186549 15 9605 NP_001180481 15 9605 NP_001803 15 9605 NP_065996 15 9605 XP_006724828 15 9605 XP_006723248 15 9605 XP_005258914 15 9605 XP_005258915 15 9605 XP_005270064 15 9605 XP_005270062 15 9605 XP_005270061 15 9605 XP_005249999 15 9605 XP_006715404 15 9605 XP_006715403 15 9605 XP_005266879 15 9605 XP_006714128 15 9605 XP_006714127 15 9605>NP_598328 Length = 582 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRKSFAS 7 LRKSFAS Sbjct: 572 LRKSFAS 578>NP_001129246 Length = 579 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRKSFAS 7 LRKSFAS Sbjct: 569 LRKSFAS 575>NP_008881 Length = 705 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRKSFAS 7 LRKSFAS Sbjct: 695 LRKSFAS 701>XP_005276380 Length = 232 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RKSFASRS 9 RKSF SRS Sbjct: 27 RKSFLSRS 34>XP_005251180 Length = 229 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RKSFASRS 9 RKSF SRS Sbjct: 27 RKSFLSRS 34>XP_006713376 Length = 325 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRKSFAS 7 LRKSFAS Sbjct: 315 LRKSFAS 321>XP_006713375 Length = 421 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRKSFAS 7 LRKSFAS Sbjct: 411 LRKSFAS 417>XP_005276078 Length = 232 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RKSFASRS 9 RKSF SRS Sbjct: 27 RKSFLSRS 34>NP_003481 Length = 580 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRKSFAS 7 LRKSFAS Sbjct: 570 LRKSFAS 576>NP_071904 Length = 1151 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRKSFASRS 9 L K FASRS Sbjct: 729 LAKQFASRS 737>XP_005266561 Length = 861 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRKSFASRS 9 L K FASRS Sbjct: 439 LAKQFASRS 447>XP_005266560 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRKSFASRS 9 L K FASRS Sbjct: 729 LAKQFASRS 737>XP_005266559 Length = 1077 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRKSFASRS 9 L K FASRS Sbjct: 655 LAKQFASRS 663>NP_001138537 Length = 900 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRKSFASR 8 L+K+FASR Sbjct: 704 LQKAFASR 711>NP_653294 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 KSF+SRS Sbjct: 187 KSFSSRS 193>NP_001273424 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 KSF+SRS Sbjct: 848 KSFSSRS 854>NP_062546 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 KSF+SRS Sbjct: 841 KSFSSRS 847>XP_005259813 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 KSF+SRS Sbjct: 116 KSFSSRS 122>XP_005259812 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 KSF+SRS Sbjct: 187 KSFSSRS 193>XP_006720675 Length = 988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 KSF+SRS Sbjct: 753 KSFSSRS 759>XP_006720674 Length = 988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 KSF+SRS Sbjct: 753 KSFSSRS 759>XP_006720672 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 KSF+SRS Sbjct: 841 KSFSSRS 847>XP_005254605 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 KSF+SRS Sbjct: 841 KSFSSRS 847>XP_005254604 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 KSF+SRS Sbjct: 841 KSFSSRS 847>NP_058649 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LRKSFA 6 LRKSFA Sbjct: 121 LRKSFA 126>NP_060136 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RKSFASRS 9 RKS ASRS Sbjct: 553 RKSNASRS 560>NP_001254708 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSFASRS 9 KSF SRS Sbjct: 536 KSFTSRS 542Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSFASRS 9 KSF SRS Sbjct: 816 KSFTSRS 822>NP_001186548 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRKSFASRS 9 +RKSFA+ + Sbjct: 667 MRKSFATHT 675>NP_001116314 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRKSFASRS 9 +RKSFA+ + Sbjct: 656 MRKSFATHT 664>NP_861447 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRKSFASRS 9 +RKSFA+ + Sbjct: 667 MRKSFATHT 675>NP_001186550 Length = 827 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRKSFASRS 9 +RKSFA+ + Sbjct: 552 MRKSFATHT 560>NP_001186549 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRKSFASRS 9 +RKSFA+ + Sbjct: 667 MRKSFATHT 675>NP_001180481 Length = 1090 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSFASRS 9 KSF SRS Sbjct: 568 KSFTSRS 574Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSFASRS 9 KSF SRS Sbjct: 848 KSFTSRS 854>NP_001803 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 +SFASRS Sbjct: 310 QSFASRS 316>NP_065996 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKSFASRS 9 +KS ASRS Sbjct: 2179 KKSLASRS 2186>XP_006724828 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RKSFASRS 9 RKS ASRS Sbjct: 504 RKSNASRS 511>XP_006723248 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSFASRS 9 KSF SRS Sbjct: 538 KSFTSRS 544Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSFASRS 9 KSF SRS Sbjct: 818 KSFTSRS 824>XP_005258914 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSFASRS 9 KSF SRS Sbjct: 570 KSFTSRS 576Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSFASRS 9 KSF SRS Sbjct: 850 KSFTSRS 856>XP_005258915 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSFASRS 9 KSF SRS Sbjct: 570 KSFTSRS 576Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSFASRS 9 KSF SRS Sbjct: 850 KSFTSRS 856>XP_005270064 Length = 1615 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKSFASRS 9 +KS ASRS Sbjct: 610 KKSLASRS 617>XP_005270062 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKSFASRS 9 +KS ASRS Sbjct: 2179 KKSLASRS 2186>XP_005270061 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKSFASRS 9 +KS ASRS Sbjct: 2179 KKSLASRS 2186>XP_005249999 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRKSFASR 8 LRKSF+ R Sbjct: 186 LRKSFSFR 193>XP_006715404 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRKSFASRS 9 +RKSFA+ + Sbjct: 563 MRKSFATHT 571>XP_006715403 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRKSFASRS 9 +RKSFA+ + Sbjct: 667 MRKSFATHT 675>XP_005266879 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRKSFASRS 9 +RKSFA+ + Sbjct: 667 MRKSFATHT 675>XP_006714128 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 +SFASRS Sbjct: 97 QSFASRS 103>XP_006714127 Length = 935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSFASRS 9 +SFASRS Sbjct: 310 QSFASRS 316Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.121 0.292 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 369,500 Number of extensions: 537 Number of successful extensions: 53 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |