Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 17 2528 XP_006718908 17 2528 XP_005271621 17 2528 XP_006718907 17 2528 XP_006718906 17 2528 XP_005271619 17 2528 XP_005271618 17 2528 NP_072053 16 5631 NP_000506 16 5631 NP_001308 16 5631 NP_001129666 16 5631 NP_001129665 16 5631 NP_072050 16 5631 NP_002050 16 5631 NP_072052 16 5631 NP_072051 16 5631 XP_005257276 16 5631 XP_005257275 16 5631 NP_055744 16 5631 NP_001309 16 5631 NP_072101 16 5631 NP_072103 16 5631 NP_072102 16 5631 NP_072170 16 5631 NP_066271 16 5631 NP_002009 16 7355 NP_006368 16 7355 NP_001243193 16 7355 NP_001073890 16 7355 NP_001243194 16 7355 XP_006722755 16 7355 XP_005256615 16 7355 XP_005256613 16 7355 XP_005256612 16 7355 XP_006716779 16 7355 NP_057434 15 9605 NP_891989 15 9605 NP_065972 15 9605 NP_891991 15 9605 NP_997299 15 9605 NP_079029 15 9605 NP_001138669 15 9605 XP_005276416 15 9605 XP_006720224 15 9605 XP_005267794 15 9605 XP_005267793 15 9605 XP_005267792 15 9605 XP_006720223 15 9605 XP_005273841 15 9605 XP_005273840 15 9605 XP_005273839 15 9605 XP_006718500 15 9605 XP_005265371 15 9605 NP_612480 15 9605>NP_000042 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1574 LRITQQK 1580>XP_006718908 Length = 1708 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 226 LRITQQK 232>XP_005271621 Length = 2708 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1226 LRITQQK 1232>XP_006718907 Length = 3050 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1568 LRITQQK 1574>XP_006718906 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1574 LRITQQK 1580>XP_005271619 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1574 LRITQQK 1580>XP_005271618 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LRITQQK Sbjct: 1574 LRITQQK 1580>NP_072053 Length = 202 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 78 TQQKSN 83>NP_000506 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 93 TQQKSN 98>NP_001308 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 93 TQQKSN 98>NP_001129666 Length = 710 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKSN 9 LR+TQ++ N Sbjct: 255 LRVTQERIN 263>NP_001129665 Length = 710 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKSN 9 LR+TQ++ N Sbjct: 255 LRVTQERIN 263>NP_072050 Length = 202 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 78 TQQKSN 83>NP_002050 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 93 TQQKSN 98>NP_072052 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 93 TQQKSN 98>NP_072051 Length = 256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 93 TQQKSN 98>XP_005257276 Length = 171 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 93 TQQKSN 98>XP_005257275 Length = 179 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 93 TQQKSN 98>NP_055744 Length = 710 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKSN 9 LR+TQ++ N Sbjct: 255 LRVTQERIN 263>NP_001309 Length = 128 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 4 TQQKSN 9>NP_072101 Length = 222 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 98 TQQKSN 103>NP_072103 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 75 TQQKSN 80>NP_072102 Length = 139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 15 TQQKSN 20>NP_072170 Length = 167 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 93 TQQKSN 98>NP_066271 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQQKSN 9 TQQKSN Sbjct: 93 TQQKSN 98>NP_002009 Length = 1269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKSN 9 +R+TQQ+ N Sbjct: 1019 VRMTQQQEN 1027>NP_006368 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKSN 9 LRI Q+SN Sbjct: 1562 LRILSQRSN 1570>NP_001243193 Length = 1258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKSN 9 +R+TQQ+ N Sbjct: 1008 VRMTQQQEN 1016>NP_001073890 Length = 1703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKSN 9 LRI Q+SN Sbjct: 1669 LRILSQRSN 1677>NP_001243194 Length = 1214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKSN 9 +R+TQQ+ N Sbjct: 964 VRMTQQQEN 972>XP_006722755 Length = 1722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKSN 9 LRI Q+SN Sbjct: 1688 LRILSQRSN 1696>XP_005256615 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKSN 9 +R+TQQ+ N Sbjct: 1018 VRMTQQQEN 1026>XP_005256613 Length = 1295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKSN 9 +R+TQQ+ N Sbjct: 1018 VRMTQQQEN 1026>XP_005256612 Length = 1296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRITQQKSN 9 +R+TQQ+ N Sbjct: 1019 VRMTQQQEN 1027>XP_006716779 Length = 2399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKSN 9 LRI Q+SN Sbjct: 2370 LRILSQRSN 2378>NP_057434 Length = 1377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 1076 LRVTQQE 1082>NP_891989 Length = 2046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 1789 LRVTQQE 1795>NP_065972 Length = 2133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 1789 LRVTQQE 1795>NP_891991 Length = 2090 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 1789 LRVTQQE 1795>NP_997299 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ITQQKSN 9 +TQ KSN Sbjct: 308 VTQSKSN 314>NP_079029 Length = 1316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRITQQKSN 9 L T+QKSN Sbjct: 1130 LMATKQKSN 1138>NP_001138669 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ITQQKSN 9 +TQ KSN Sbjct: 308 VTQSKSN 314>XP_005276416 Length = 1583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ITQQKSN 9 +TQ KSN Sbjct: 297 VTQSKSN 303>XP_006720224 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 1076 LRVTQQE 1082>XP_005267794 Length = 1379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 1035 LRVTQQE 1041>XP_005267793 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 1046 LRVTQQE 1052>XP_005267792 Length = 1420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 1076 LRVTQQE 1082>XP_006720223 Length = 1989 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 1789 LRVTQQE 1795>XP_005273841 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_005273840 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_005273839 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_006718500 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_005265371 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ITQQKSN 9 ITQ KSN Sbjct: 289 ITQTKSN 295>NP_612480 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRITQQK 7 LR+TQQ+ Sbjct: 41 LRVTQQE 47Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.118 0.282 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 416,788 Number of extensions: 579 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |