Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055365 19 869 NP_060811 17 4312 NP_001265460 17 4312 NP_001265462 17 4312 NP_001265461 17 4312 NP_037509 17 4312 NP_001158067 17 4312 XP_006725075 17 4312 XP_006725074 17 4312 XP_006725073 17 4312 XP_005267103 17 4312 XP_006715573 17 4312 XP_006715572 17 4312 NP_054859 16 5631 NP_001120679 16 5631 XP_006712620 16 5631 XP_005246688 16 5631 XP_005246689 16 5631 NP_006098 16 7355 NP_057508 16 7355 XP_005257512 16 7355 XP_006722006 16 7355 XP_005257511 16 7355 XP_005257509 16 7355 XP_005257508 16 7355 XP_005257507 16 7355 XP_005257506 16 7355 XP_005257505 16 7355 NP_001360 15 9605 NP_001361 15 9605 NP_078849 15 9605 XP_005248319 15 9605 XP_006712019 15 9605>NP_055365 Length = 1032 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LQYSQSLI 8 LQYSQSLI Sbjct: 407 LQYSQSLI 414>NP_060811 Length = 678 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY+++L+A Sbjct: 624 LQYTENLVA 632>NP_001265460 Length = 631 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY+++L+A Sbjct: 577 LQYTENLVA 585>NP_001265462 Length = 605 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY+++L+A Sbjct: 551 LQYTENLVA 559>NP_001265461 Length = 552 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY+++L+A Sbjct: 498 LQYTENLVA 506>NP_037509 Length = 778 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY++SL++ Sbjct: 342 LQYNESLVS 350>NP_001158067 Length = 1036 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY++SL++ Sbjct: 600 LQYNESLVS 608>XP_006725075 Length = 552 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY+++L+A Sbjct: 498 LQYTENLVA 506>XP_006725074 Length = 678 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY+++L+A Sbjct: 624 LQYTENLVA 632>XP_006725073 Length = 688 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY+++L+A Sbjct: 634 LQYTENLVA 642>XP_005267103 Length = 552 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY+++L+A Sbjct: 498 LQYTENLVA 506>XP_006715573 Length = 678 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY+++L+A Sbjct: 624 LQYTENLVA 632>XP_006715572 Length = 688 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LQYSQSLIA 9 LQY+++L+A Sbjct: 634 LQYTENLVA 642>NP_054859 Length = 954 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQYSQSLIA 9 + YSQ LIA Sbjct: 347 ISYSQDLIA 355>NP_001120679 Length = 954 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQYSQSLIA 9 + YSQ LIA Sbjct: 347 ISYSQDLIA 355>XP_006712620 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQYSQSLIA 9 + YSQ LIA Sbjct: 347 ISYSQDLIA 355>XP_005246688 Length = 954 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQYSQSLIA 9 + YSQ LIA Sbjct: 347 ISYSQDLIA 355>XP_005246689 Length = 954 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LQYSQSLIA 9 + YSQ LIA Sbjct: 347 ISYSQDLIA 355>NP_006098 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQYSQSLIA 9 L+Y QSL+A Sbjct: 86 LRYLQSLLA 94>NP_057508 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQYSQSLIA 9 L+Y QSL+A Sbjct: 86 LRYLQSLLA 94>XP_005257512 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQYSQSLIA 9 L+Y QSL+A Sbjct: 86 LRYLQSLLA 94>XP_006722006 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQYSQSLIA 9 L+Y QSL+A Sbjct: 10 LRYLQSLLA 18>XP_005257511 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQYSQSLIA 9 L+Y QSL+A Sbjct: 86 LRYLQSLLA 94>XP_005257509 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQYSQSLIA 9 L+Y QSL+A Sbjct: 86 LRYLQSLLA 94>XP_005257508 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQYSQSLIA 9 L+Y QSL+A Sbjct: 86 LRYLQSLLA 94>XP_005257507 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQYSQSLIA 9 L+Y QSL+A Sbjct: 86 LRYLQSLLA 94>XP_005257506 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQYSQSLIA 9 L+Y QSL+A Sbjct: 86 LRYLQSLLA 94>XP_005257505 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LQYSQSLIA 9 L+Y QSL+A Sbjct: 86 LRYLQSLLA 94>NP_001360 Length = 4624 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LQYSQSLIA 9 LQY QSL A Sbjct: 4299 LQYIQSLPA 4307>NP_001361 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QYSQSLI 8 QY QSLI Sbjct: 3012 QYRQSLI 3018>NP_078849 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LQYSQSLI 8 L+Y QSL+ Sbjct: 92 LEYQQSLL 99>XP_005248319 Length = 4609 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LQYSQSLIA 9 LQY QSL A Sbjct: 4284 LQYIQSLPA 4292>XP_006712019 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QYSQSLI 8 QY QSLI Sbjct: 3012 QYRQSLI 3018Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.125 0.296 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 370,150 Number of extensions: 404 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |