Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 20 299 NP_858045 20 299 NP_006525 20 299 NP_001167559 20 299 NP_671766 20 390 NP_671756 20 390 NP_003734 20 390 XP_006712189 20 390 XP_005264685 20 390 XP_005264684 20 390 XP_005264683 20 390 XP_005264682 20 390 NP_006531 19 665 XP_005251190 19 665 XP_005251188 19 665 XP_005251189 19 665 XP_005251187 19 665 XP_005251186 19 665 XP_005251185 19 665 NP_878918 17 2528 NP_055995 17 2528 XP_006720147 17 2528 XP_005267517 17 2528 XP_005267516 17 2528 XP_005267515 17 2528 XP_005267514 17 2528 XP_005267513 17 2528 XP_005267512 17 2528 XP_005267511 17 2528 NP_036366 16 7355 XP_006723878 16 7355 NP_060365 16 7355 NP_001242941 15 9605 NP_005955 15 9605 NP_036220 15 9605 NP_001243024 15 9605 XP_005259906 15 9605 XP_005256710 15 9605 XP_005256709 15 9605 XP_005256708 15 9605>NP_001167558 Length = 1423 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1220 LNAQMVAQR 1228>NP_858045 Length = 1424 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1221 LNAQMVAQR 1229>NP_006525 Length = 1420 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1217 LNAQMVAQR 1225>NP_001167559 Length = 1415 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1212 LNAQMVAQR 1220>NP_671766 Length = 1440 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1104 LNAQMLAQR 1112>NP_671756 Length = 1399 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1104 LNAQMLAQR 1112>NP_003734 Length = 1441 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1104 LNAQMLAQR 1112>XP_006712189 Length = 1394 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1057 LNAQMLAQR 1065>XP_005264685 Length = 1399 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1104 LNAQMLAQR 1112>XP_005264684 Length = 1399 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1104 LNAQMLAQR 1112>XP_005264683 Length = 1440 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1104 LNAQMLAQR 1112>XP_005264682 Length = 1441 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQM+AQR Sbjct: 1104 LNAQMLAQR 1112>NP_006531 Length = 1464 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 +NAQM+AQR Sbjct: 1230 INAQMLAQR 1238>XP_005251190 Length = 1395 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 +NAQM+AQR Sbjct: 1161 INAQMLAQR 1169>XP_005251188 Length = 1464 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 +NAQM+AQR Sbjct: 1230 INAQMLAQR 1238>XP_005251189 Length = 1464 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 +NAQM+AQR Sbjct: 1230 INAQMLAQR 1238>XP_005251187 Length = 1464 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 +NAQM+AQR Sbjct: 1230 INAQMLAQR 1238>XP_005251186 Length = 1464 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 +NAQM+AQR Sbjct: 1230 INAQMLAQR 1238>XP_005251185 Length = 1464 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 +NAQM+AQR Sbjct: 1230 INAQMLAQR 1238>NP_878918 Length = 6907 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQ+++QR Sbjct: 3082 LNAQILSQR 3090>NP_055995 Length = 6885 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQ+++QR Sbjct: 3082 LNAQILSQR 3090>XP_006720147 Length = 4788 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQ+++QR Sbjct: 3082 LNAQILSQR 3090>XP_005267517 Length = 6883 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQ+++QR Sbjct: 3082 LNAQILSQR 3090>XP_005267516 Length = 6884 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQ+++QR Sbjct: 3082 LNAQILSQR 3090>XP_005267515 Length = 6899 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQ+++QR Sbjct: 3082 LNAQILSQR 3090>XP_005267514 Length = 6908 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQ+++QR Sbjct: 3082 LNAQILSQR 3090>XP_005267513 Length = 6921 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQ+++QR Sbjct: 3082 LNAQILSQR 3090>XP_005267512 Length = 6922 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQ+++QR Sbjct: 3082 LNAQILSQR 3090>XP_005267511 Length = 6922 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 LNAQ+++QR Sbjct: 3082 LNAQILSQR 3090>NP_036366 Length = 228 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LNAQMIAQR 9 +N+Q++AQ+ Sbjct: 57 INSQLVAQQ 65>XP_006723878 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNAQMIAQR 9 L AQM A+R Sbjct: 330 LKAQMFAER 338>NP_060365 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LNAQMIAQR 9 L AQM A+R Sbjct: 705 LKAQMFAER 713>NP_001242941 Length = 2007 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNAQMIAQR 9 LNA++ A+R Sbjct: 1800 LNAELAAER 1808>NP_005955 Length = 1976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNAQMIAQR 9 LNA++ A+R Sbjct: 1769 LNAELAAER 1777>NP_036220 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AQMIAQR 9 AQ++AQR Sbjct: 23 AQLVAQR 29>NP_001243024 Length = 1985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNAQMIAQR 9 LNA++ A+R Sbjct: 1778 LNAELAAER 1786>XP_005259906 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AQMIAQR 9 AQ++AQR Sbjct: 62 AQLVAQR 68>XP_005256710 Length = 1986 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNAQMIAQR 9 LNA++ A+R Sbjct: 1779 LNAELAAER 1787>XP_005256709 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNAQMIAQR 9 LNA++ A+R Sbjct: 1790 LNAELAAER 1798>XP_005256708 Length = 2007 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LNAQMIAQR 9 LNA++ A+R Sbjct: 1800 LNAELAAER 1808Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.126 0.308 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 218,740 Number of extensions: 274 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |