Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001137429 17 3301 NP_110411 17 3301 XP_006715633 17 3301 XP_006715632 17 3301 NP_000856 17 4312 NP_056507 17 4312 NP_055523 16 5631 NP_543009 16 5631 NP_001009183 16 5631 NP_001009182 16 5631 NP_003607 16 5631 NP_001161707 16 5631 XP_006719769 16 5631 NP_060570 16 7355 NP_001165891 16 7355 NP_001363 16 7355 NP_001275759 16 7355 NP_001275761 16 7355 XP_006721530 16 7355 XP_006721529 16 7355 XP_006721528 16 7355 XP_005270502 16 7355 NP_060237 15 9605 NP_570901 15 9605 NP_001121685 15 9605 NP_001121684 15 9605 NP_653221 15 9605 NP_001243316 15 9605 NP_001243315 15 9605 NP_001243314 15 9605 NP_000788 15 9605 NP_001003745 15 9605 XP_006716662 15 9605 XP_005246413 15 9605 XP_005246412 15 9605 XP_005270516 15 9605 NP_689741 15 9605 NP_001004461 15 9605>NP_001137429 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 LLAVL MP Sbjct: 129 LLAVLNMP 136>NP_110411 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 LLAVL MP Sbjct: 129 LLAVLNMP 136>XP_006715633 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 LLAVL MP Sbjct: 129 LLAVLNMP 136>XP_006715632 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 LLAVL MP Sbjct: 129 LLAVLNMP 136>NP_000856 Length = 365 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LLAVLEMPL 9 L+AVL MPL Sbjct: 70 LVAVLVMPL 78>NP_056507 Length = 1932 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LAVLEMPL 9 +AVLE+PL Sbjct: 1618 MAVLEVPL 1625>NP_055523 Length = 2209 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLAVLEMPL 9 L+AVLE P+ Sbjct: 2045 LIAVLECPV 2053>NP_543009 Length = 363 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 LLA L+MP Sbjct: 54 LLAALDMP 61>NP_001009183 Length = 250 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLAVLEMPL 9 LLA LE PL Sbjct: 218 LLACLEKPL 226>NP_001009182 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLAVLEMPL 9 LLA LE PL Sbjct: 203 LLACLEKPL 211>NP_003607 Length = 280 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLAVLEMPL 9 LLA LE PL Sbjct: 218 LLACLEKPL 226>NP_001161707 Length = 2139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 L+AVLE P Sbjct: 1865 LMAVLEFP 1872>XP_006719769 Length = 2209 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLAVLEMPL 9 L+AVLE P+ Sbjct: 2045 LIAVLECPV 2053>NP_060570 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAVLEMPL 9 LAVLE P+ Sbjct: 423 LAVLESPI 430>NP_001165891 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAVLEMPL 9 LAVLE P+ Sbjct: 404 LAVLESPI 411>NP_001363 Length = 4486 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLAVLEMPL 9 L AVLE PL Sbjct: 2516 LQAVLEKPL 2524>NP_001275759 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLAVLEMPL 9 LLA LE P+ Sbjct: 9 LLATLEKPI 17>NP_001275761 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LLAVLEMPL 9 LLA LE P+ Sbjct: 9 LLATLEKPI 17>XP_006721530 Length = 2746 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLAVLEMPL 9 L AVLE PL Sbjct: 2516 LQAVLEKPL 2524>XP_006721529 Length = 2817 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLAVLEMPL 9 L AVLE PL Sbjct: 2516 LQAVLEKPL 2524>XP_006721528 Length = 3869 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LLAVLEMPL 9 L AVLE PL Sbjct: 2516 LQAVLEKPL 2524>XP_005270502 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAVLEMPL 9 L VLE+PL Sbjct: 749 LKVLELPL 756>NP_060237 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 LLA+LE P Sbjct: 101 LLALLESP 108>NP_570901 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 LLA+LE P Sbjct: 126 LLALLESP 133>NP_001121685 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 +LAV+E P Sbjct: 88 MLAVMEQP 95>NP_001121684 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 +LAV+E P Sbjct: 88 MLAVMEQP 95>NP_653221 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAVLEMP 8 LAVL MP Sbjct: 193 LAVLNMP 199>NP_001243316 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAVLEMP 8 LAVL MP Sbjct: 193 LAVLNMP 199>NP_001243315 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAVLEMP 8 LAVL MP Sbjct: 193 LAVLNMP 199>NP_001243314 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAVLEMP 8 LAVL MP Sbjct: 193 LAVLNMP 199>NP_000788 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LLAVLEMPL 9 LLA+L +PL Sbjct: 82 LLALLVLPL 90>NP_001003745 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 L A+L+MP Sbjct: 222 LFAILKMP 229>XP_006716662 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 LLA+LE P Sbjct: 126 LLALLESP 133>XP_005246413 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 +LAV+E P Sbjct: 88 MLAVMEQP 95>XP_005246412 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 +LAV+E P Sbjct: 88 MLAVMEQP 95>XP_005270516 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAVLEMP 8 LAVL MP Sbjct: 193 LAVLNMP 199>NP_689741 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 +LAV+E P Sbjct: 88 MLAVMEQP 95>NP_001004461 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LLAVLEMP 8 L A+L+MP Sbjct: 222 LFAILKMP 229Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.150 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 483,219 Number of extensions: 592 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |