Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_009052 22 103 NP_001243576 22 103 NP_005684 18 1935 NP_001238863 18 1935 NP_001123573 18 1935 NP_001238864 18 1935 NP_001123574 18 1935 NP_443138 18 1935 XP_006724187 18 1935 XP_006724186 18 1935 XP_005261381 18 1935 XP_005252775 18 1935 XP_006718179 18 1935 XP_005252773 18 1935 XP_005252772 18 1935 XP_005252770 18 1935 XP_005252767 18 1935 XP_005252766 18 1935 XP_006718178 18 1935 XP_006718177 18 1935 XP_005252764 18 1935 XP_005252763 18 1935 XP_006718176 18 1935 XP_006718175 18 1935 XP_005252762 18 1935 NP_065816 17 3301 XP_006710573 17 3301 XP_006710572 17 3301 XP_006710571 17 3301 XP_006710570 17 3301 XP_006710569 17 3301 XP_006710568 17 3301 XP_006710567 17 3301 XP_006710566 17 3301 XP_005245859 17 3301 NP_060050 16 7355 NP_001265522 16 7355 NP_005580 16 7355 NP_001002021 16 7355 NP_002617 16 7355 NP_002800 16 7355 NP_001265523 16 7355 NP_056151 16 7355 XP_005261194 16 7355 XP_005261193 16 7355 XP_005261192 16 7355 XP_006724075 16 7355 XP_006724074 16 7355 XP_005268807 16 7355 XP_005268806 16 7355 XP_005269984 16 7355 XP_005269983 16 7355 XP_005269982 16 7355 XP_006717970 16 7355 NP_001138663 15 9605 NP_597721 15 9605 NP_001103224 15 9605 XP_006719593 15 9605 XP_006719591 15 9605 NP_005884 15 9605>NP_009052 Length = 461 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKTARRYNH 9 L+TARRYNH Sbjct: 314 LETARRYNH 322>NP_001243576 Length = 364 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKTARRYNH 9 L+TARRYNH Sbjct: 217 LETARRYNH 225>NP_005684 Length = 447 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 300 LETSRRYN 307>NP_001238863 Length = 453 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 306 LETSRRYN 313>NP_001123573 Length = 387 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 240 LETSRRYN 247>NP_001238864 Length = 453 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 306 LETSRRYN 313>NP_001123574 Length = 402 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 255 LETSRRYN 262>NP_443138 Length = 820 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKTARRYNH 9 L+ +RR+NH Sbjct: 364 LRNSRRFNH 372>XP_006724187 Length = 820 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKTARRYNH 9 L+ +RR+NH Sbjct: 364 LRNSRRFNH 372>XP_006724186 Length = 820 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKTARRYNH 9 L+ +RR+NH Sbjct: 364 LRNSRRFNH 372>XP_005261381 Length = 820 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKTARRYNH 9 L+ +RR+NH Sbjct: 364 LRNSRRFNH 372>XP_005252775 Length = 253 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 106 LETSRRYN 113>XP_006718179 Length = 402 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 255 LETSRRYN 262>XP_005252773 Length = 313 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 166 LETSRRYN 173>XP_005252772 Length = 358 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 211 LETSRRYN 218>XP_005252770 Length = 387 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 240 LETSRRYN 247>XP_005252767 Length = 402 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 255 LETSRRYN 262>XP_005252766 Length = 402 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 255 LETSRRYN 262>XP_006718178 Length = 402 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 255 LETSRRYN 262>XP_006718177 Length = 447 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 300 LETSRRYN 307>XP_005252764 Length = 447 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 300 LETSRRYN 307>XP_005252763 Length = 447 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 300 LETSRRYN 307>XP_006718176 Length = 447 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 300 LETSRRYN 307>XP_006718175 Length = 447 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 300 LETSRRYN 307>XP_005252762 Length = 447 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 L+T+RRYN Sbjct: 300 LETSRRYN 307>NP_065816 Length = 5183 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 ++TA+RYN Sbjct: 4314 IETAKRYN 4321>XP_006710573 Length = 5177 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 ++TA+RYN Sbjct: 4308 IETAKRYN 4315>XP_006710572 Length = 5188 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 ++TA+RYN Sbjct: 4319 IETAKRYN 4326>XP_006710571 Length = 5194 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 ++TA+RYN Sbjct: 4325 IETAKRYN 4332>XP_006710570 Length = 5195 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 ++TA+RYN Sbjct: 4326 IETAKRYN 4333>XP_006710569 Length = 5212 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 ++TA+RYN Sbjct: 4343 IETAKRYN 4350>XP_006710568 Length = 5221 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 ++TA+RYN Sbjct: 4352 IETAKRYN 4359>XP_006710567 Length = 5222 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 ++TA+RYN Sbjct: 4353 IETAKRYN 4360>XP_006710566 Length = 5222 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 ++TA+RYN Sbjct: 4353 IETAKRYN 4360>XP_005245859 Length = 5223 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKTARRYN 8 ++TA+RYN Sbjct: 4354 IETAKRYN 4361>NP_060050 Length = 708 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTARRYNH 9 K++RR NH Sbjct: 666 KSSRRRNH 673>NP_001265522 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 TAR+Y H Sbjct: 443 TARKYAH 449>NP_005580 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 TAR+Y H Sbjct: 456 TARKYAH 462>NP_001002021 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 TAR Y+H Sbjct: 199 TARTYSH 205>NP_002617 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 TAR Y+H Sbjct: 149 TARTYSH 155>NP_002800 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 T+RR NH Sbjct: 104 TSRRLNH 110>NP_001265523 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 TAR+Y H Sbjct: 302 TARKYAH 308>NP_056151 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 ARRYNH 9 ARRY H Sbjct: 569 ARRYKH 574>XP_005261194 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 TAR Y+H Sbjct: 120 TARTYSH 126>XP_005261193 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 TAR Y+H Sbjct: 143 TARTYSH 149>XP_005261192 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 TAR Y+H Sbjct: 172 TARTYSH 178>XP_006724075 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 TAR Y+H Sbjct: 199 TARTYSH 205>XP_006724074 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TARRYNH 9 TAR Y+H Sbjct: 222 TARTYSH 228>XP_005268807 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 ARRYNH 9 ARRY H Sbjct: 297 ARRYKH 302>XP_005268806 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 ARRYNH 9 ARRY H Sbjct: 336 ARRYKH 341>XP_005269984 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTARRYNH 9 K++RR NH Sbjct: 340 KSSRRRNH 347>XP_005269983 Length = 708 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTARRYNH 9 K++RR NH Sbjct: 666 KSSRRRNH 673>XP_005269982 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTARRYNH 9 K++RR NH Sbjct: 692 KSSRRRNH 699>XP_006717970 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTARRYNH 9 K++RR NH Sbjct: 692 KSSRRRNH 699>NP_001138663 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TARRYN 8 +ARRYN Sbjct: 59 SARRYN 64>NP_597721 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KTARRYN 8 K +RRYN Sbjct: 327 KKSRRYN 333>NP_001103224 Length = 2215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKTARRYNH 9 +K AR+Y H Sbjct: 120 VKKARKYLH 128>XP_006719593 Length = 1304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKTARRYNH 9 +K AR+Y H Sbjct: 120 VKKARKYLH 128>XP_006719591 Length = 2230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKTARRYNH 9 +K AR+Y H Sbjct: 120 VKKARKYLH 128>NP_005884 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKTARRYN 8 LKTA RY+ Sbjct: 342 LKTAWRYD 349Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.131 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 456,555 Number of extensions: 597 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |