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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_002345                                                              17    2528
NP_733751                                                              17    3301
XP_006716142                                                           17    3301
XP_005250088                                                           17    3301
XP_006716141                                                           17    3301
XP_005250085                                                           17    3301
XP_006716140                                                           17    3301
XP_005250084                                                           17    3301
XP_005250083                                                           17    3301
XP_005250082                                                           17    3301
NP_001150                                                              17    4312
NP_951059                                                              15    9605
NP_060119                                                              15    9605
NP_951058                                                              15    9605
NP_000433                                                              15    9605
NP_115690                                                              15    9605
XP_005276940                                                           15    9605
XP_005276939                                                           15    9605
XP_005276938                                                           15    9605
XP_005276937                                                           15    9605
XP_006722008                                                           15    9605
XP_006722007                                                           15    9605
XP_006719702                                                           15    9605
XP_006717971                                                           15    9605
XP_005269990                                                           15    9605
NP_076943                                                              15    9605

>NP_002345
          Length = 314

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   LKSGIVAVV 9
           LK+G++AV+
Sbjct: 264 LKAGVIAVI 272



>NP_733751
          Length = 4911

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LKSGIVAVV 9
           LKSGI AVV
Sbjct: 912 LKSGIGAVV 920



>XP_006716142
          Length = 4927

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LKSGIVAVV 9
           LKSGI AVV
Sbjct: 913 LKSGIGAVV 921



>XP_005250088
          Length = 4928

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LKSGIVAVV 9
           LKSGI AVV
Sbjct: 913 LKSGIGAVV 921



>XP_006716141
          Length = 4959

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LKSGIVAVV 9
           LKSGI AVV
Sbjct: 913 LKSGIGAVV 921



>XP_005250085
          Length = 4979

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LKSGIVAVV 9
           LKSGI AVV
Sbjct: 913 LKSGIGAVV 921



>XP_006716140
          Length = 4982

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LKSGIVAVV 9
           LKSGI AVV
Sbjct: 913 LKSGIGAVV 921



>XP_005250084
          Length = 4982

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LKSGIVAVV 9
           LKSGI AVV
Sbjct: 913 LKSGIGAVV 921



>XP_005250083
          Length = 4982

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LKSGIVAVV 9
           LKSGI AVV
Sbjct: 912 LKSGIGAVV 920



>XP_005250082
          Length = 4983

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LKSGIVAVV 9
           LKSGI AVV
Sbjct: 913 LKSGIGAVV 921



>NP_001150
          Length = 1338

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LKSGIVAVV 9
           LK+GI+A V
Sbjct: 812 LKTGIIAAV 820



>NP_951059
          Length = 552

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SGIVAVV 9
           SG+VAVV
Sbjct: 340 SGLVAVV 346



>NP_060119
          Length = 875

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SGIVAVV 9
           SG+VAVV
Sbjct: 340 SGLVAVV 346



>NP_951058
          Length = 853

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SGIVAVV 9
           SG+VAVV
Sbjct: 340 SGLVAVV 346



>NP_000433
          Length = 738

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSGIVAVV 9
           K G++AVV
Sbjct: 600 KKGLIAVV 607



>NP_115690
          Length = 327

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LKSGIVAV 8
           L SGIVA+
Sbjct: 314 LTSGIVAI 321



>XP_005276940
          Length = 706

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSGIVAVV 9
           K G++AVV
Sbjct: 600 KKGLIAVV 607



>XP_005276939
          Length = 717

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSGIVAVV 9
           K G++AVV
Sbjct: 600 KKGLIAVV 607



>XP_005276938
          Length = 719

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSGIVAVV 9
           K G++AVV
Sbjct: 600 KKGLIAVV 607



>XP_005276937
          Length = 727

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSGIVAVV 9
           K G++AVV
Sbjct: 600 KKGLIAVV 607



>XP_006722008
          Length = 757

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSGIVAVV 9
           K G++AVV
Sbjct: 600 KKGLIAVV 607



>XP_006722007
          Length = 757

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSGIVAVV 9
           K G++AVV
Sbjct: 600 KKGLIAVV 607



>XP_006719702
          Length = 246

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LKSGIVAV 8
           L SGIVA+
Sbjct: 233 LTSGIVAI 240



>XP_006717971
          Length = 559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SGIVAVV 9
           SG+VAVV
Sbjct: 340 SGLVAVV 346



>XP_005269990
          Length = 564

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SGIVAVV 9
           SG+VAVV
Sbjct: 340 SGLVAVV 346



>NP_076943
          Length = 176

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LKSGIVA 7
           LK+GIVA
Sbjct: 127 LKTGIVA 133



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.323    0.140    0.339 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 382,309
Number of extensions: 469
Number of successful extensions: 26
Number of sequences better than 10000.0: 26
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 26
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)