Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 509 NP_001035957 20 509 XP_006721991 20 509 XP_006721990 20 509 XP_006721989 20 509 XP_005258041 20 509 XP_006721988 20 509 XP_006721987 20 509 XP_006721986 20 509 XP_005258040 20 509 XP_006721985 20 509 NP_001073981 17 4312 XP_005270227 17 4312 XP_005270226 17 4312 XP_005270225 17 4312 XP_005270224 17 4312 XP_005270223 17 4312 NP_777552 16 5631 XP_006721747 16 5631 XP_005257084 16 5631 XP_006720523 16 5631 NP_001013860 16 7355 XP_006721205 16 7355 XP_005255864 16 7355 XP_006721204 16 7355 XP_006721203 16 7355 XP_006721202 16 7355 XP_006721201 16 7355 NP_002954 15 9605 NP_065859 15 9605 NP_065073 15 9605 XP_006715582 15 9605 XP_006711862 15 9605 XP_005273271 15 9605 XP_005273270 15 9605 XP_005273269 15 9605 XP_005273268 15 9605 XP_005273266 15 9605 XP_006711861 15 9605 XP_005245488 15 9605 XP_006711350 15 9605 NP_055294 15 9605 NP_005735 15 9605 NP_789793 15 9605>NP_000258 Length = 2818 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 612 LKNKQADRS 620>NP_001035957 Length = 2839 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 612 LKNKQADRS 620>XP_006721991 Length = 1632 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 622 LKNKQADRS 630>XP_006721990 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 622 LKNKQADRS 630>XP_006721989 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 622 LKNKQADRS 630>XP_005258041 Length = 2836 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 612 LKNKQADRS 620>XP_006721988 Length = 2846 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 622 LKNKQADRS 630>XP_006721987 Length = 2849 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 622 LKNKQADRS 630>XP_006721986 Length = 2854 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 609 LKNKQADRS 617>XP_005258040 Length = 2857 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 612 LKNKQADRS 620>XP_006721985 Length = 2867 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 LKN QADRS Sbjct: 622 LKNKQADRS 630>NP_001073981 Length = 974 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KNNQADRS 9 +NNQA++S Sbjct: 173 RNNQAEKS 180>XP_005270227 Length = 909 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KNNQADRS 9 +NNQA++S Sbjct: 173 RNNQAEKS 180>XP_005270226 Length = 927 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KNNQADRS 9 +NNQA++S Sbjct: 126 RNNQAEKS 133>XP_005270225 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KNNQADRS 9 +NNQA++S Sbjct: 173 RNNQAEKS 180>XP_005270224 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KNNQADRS 9 +NNQA++S Sbjct: 173 RNNQAEKS 180>XP_005270223 Length = 973 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KNNQADRS 9 +NNQA++S Sbjct: 173 RNNQAEKS 180>NP_777552 Length = 201 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 +K+NQ DR+ Sbjct: 78 IKDNQKDRT 86>XP_006721747 Length = 198 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 +K+NQ DR+ Sbjct: 75 IKDNQKDRT 83>XP_005257084 Length = 209 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 +K+NQ DR+ Sbjct: 115 IKDNQKDRT 123>XP_006720523 Length = 519 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKNNQAD 7 ++NNQAD Sbjct: 453 IENNQAD 459>NP_001013860 Length = 1435 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKNNQAD 7 L+NN+AD Sbjct: 700 LRNNRAD 706>XP_006721205 Length = 1441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKNNQAD 7 L+NN+AD Sbjct: 700 LRNNRAD 706>XP_005255864 Length = 1372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKNNQAD 7 L+NN+AD Sbjct: 664 LRNNRAD 670>XP_006721204 Length = 1405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKNNQAD 7 L+NN+AD Sbjct: 664 LRNNRAD 670>XP_006721203 Length = 1408 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKNNQAD 7 L+NN+AD Sbjct: 700 LRNNRAD 706>XP_006721202 Length = 1424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKNNQAD 7 L+NN+AD Sbjct: 700 LRNNRAD 706>XP_006721201 Length = 1430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKNNQAD 7 L+NN+AD Sbjct: 700 LRNNRAD 706>NP_002954 Length = 101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKNNQADRS 9 + N QA+RS Sbjct: 1 MSNTQAERS 9>NP_065859 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 L+N Q+D+S Sbjct: 114 LQNGQSDQS 122>NP_065073 Length = 2177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKNNQADR 8 LKN +AD+ Sbjct: 663 LKNQEADQ 670>XP_006715582 Length = 2106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKNNQADR 8 LKN +AD+ Sbjct: 592 LKNQEADQ 599>XP_006711862 Length = 1704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 L+N Q+D+S Sbjct: 114 LQNGQSDQS 122>XP_005273271 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 L+N Q+D+S Sbjct: 114 LQNGQSDQS 122>XP_005273270 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 L+N Q+D+S Sbjct: 114 LQNGQSDQS 122>XP_005273269 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 L+N Q+D+S Sbjct: 114 LQNGQSDQS 122>XP_005273268 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 L+N Q+D+S Sbjct: 114 LQNGQSDQS 122>XP_005273266 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 L+N Q+D+S Sbjct: 114 LQNGQSDQS 122>XP_006711861 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKNNQADRS 9 L+N Q+D+S Sbjct: 114 LQNGQSDQS 122>XP_005245488 Length = 101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKNNQADRS 9 + N QA+RS Sbjct: 1 MSNTQAERS 9>XP_006711350 Length = 101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKNNQADRS 9 + N QA+RS Sbjct: 1 MSNTQAERS 9>NP_055294 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKNNQADR 8 +KNNQ ++ Sbjct: 58 IKNNQTEK 65>NP_005735 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KNNQAD 7 +NNQAD Sbjct: 492 ENNQAD 497>NP_789793 Length = 101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKNNQADRS 9 + N QA+RS Sbjct: 1 MSNTQAERS 9Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.113 0.283 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 596,026 Number of extensions: 1130 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |