Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 869 NP_001185763 19 869 NP_055459 19 869 XP_006726436 19 869 XP_006726410 19 869 XP_006711784 19 869 XP_006711719 19 869 XP_006711718 19 869 XP_006711717 19 869 XP_006711716 19 869 XP_006711715 19 869 XP_006711714 19 869 XP_006711713 19 869 XP_006711712 19 869 XP_006711711 19 869 XP_006711710 19 869 XP_006711709 19 869 XP_005277503 19 869 XP_005273038 19 869 XP_006711708 19 869 XP_005277500 19 869 XP_006711707 19 869 XP_005277499 19 869 XP_006711706 19 869 XP_006711705 19 869 XP_006711164 19 869 XP_005276114 19 869 XP_006710122 19 869 NP_001248344 18 1935 NP_694534 18 1935 NP_008871 18 1935 NP_821078 18 1935 NP_001248343 18 1935 XP_006719213 18 1935 XP_006719212 18 1935 NP_006438 17 3301 NP_001001992 17 3301 NP_001027582 17 3301 NP_004730 17 3301 NP_006209 17 4312 NP_064544 17 4312 NP_001241878 17 4312 XP_006713721 17 4312 NP_001073867 16 5631 XP_005251911 16 5631 XP_005251910 16 5631 XP_005251909 16 5631 XP_005251908 16 5631 XP_005251907 16 5631 NP_003787 16 7355 NP_001239570 16 7355 XP_005259420 16 7355 XP_005259419 16 7355 NP_001244068 15 9605 NP_000076 15 9605 NP_001159417 15 9605 NP_002356 15 9605 NP_001035247 15 9605 NP_001138786 15 9605 NP_001008781 15 9605 NP_004061 15 9605 XP_005274567 15 9605 XP_006723210 15 9605 XP_005263307 15 9605 XP_006714391 15 9605 XP_006714390 15 9605 XP_005245790 15 9605 XP_006710132 15 9605 NP_037366 15 9605 NP_001036169 15 9605 NP_060802 15 9605>NP_001185761 Length = 2240 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2219 LKKARTNLE 2227>NP_001185763 Length = 2362 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2325 LKKARTNLE 2333>NP_055459 Length = 2346 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2325 LKKARTNLE 2333>XP_006726436 Length = 178 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 103 LKKARTNLE 111>XP_006726410 Length = 2087 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2066 LKKARTNLE 2074>XP_006711784 Length = 178 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 103 LKKARTNLE 111>XP_006711719 Length = 2302 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2281 LKKARTNLE 2289>XP_006711718 Length = 1436 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 1332 LKKARTNLE 1340>XP_006711717 Length = 2385 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2281 LKKARTNLE 2289>XP_006711716 Length = 2411 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2390 LKKARTNLE 2398>XP_006711715 Length = 2428 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2324 LKKARTNLE 2332>XP_006711714 Length = 2429 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2325 LKKARTNLE 2333>XP_006711713 Length = 2432 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2328 LKKARTNLE 2336>XP_006711712 Length = 2473 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2369 LKKARTNLE 2377>XP_006711711 Length = 2482 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2378 LKKARTNLE 2386>XP_006711710 Length = 2494 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2390 LKKARTNLE 2398>XP_006711709 Length = 2495 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2391 LKKARTNLE 2399>XP_005277503 Length = 2498 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2488 LKKARTNLE 2496>XP_005273038 Length = 2509 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2488 LKKARTNLE 2496>XP_006711708 Length = 2512 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2408 LKKARTNLE 2416>XP_005277500 Length = 2525 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2488 LKKARTNLE 2496>XP_006711707 Length = 2553 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2449 LKKARTNLE 2457>XP_005277499 Length = 2561 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2488 LKKARTNLE 2496>XP_006711706 Length = 2591 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2487 LKKARTNLE 2495>XP_006711705 Length = 2592 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2488 LKKARTNLE 2496>XP_006711164 Length = 2087 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 2066 LKKARTNLE 2074>XP_005276114 Length = 134 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 73 LKKARTNLE 81>XP_006710122 Length = 126 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA TNLE Sbjct: 103 LKKARTNLE 111>NP_001248344 Length = 753 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KAMTNLE 9 KAMTNLE Sbjct: 585 KAMTNLE 591>NP_694534 Length = 750 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KAMTNLE 9 KAMTNLE Sbjct: 582 KAMTNLE 588>NP_008871 Length = 763 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KAMTNLE 9 KAMTNLE Sbjct: 595 KAMTNLE 601>NP_821078 Length = 377 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KAMTNLE 9 KAMTNLE Sbjct: 209 KAMTNLE 215>NP_001248343 Length = 642 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KAMTNLE 9 KAMTNLE Sbjct: 474 KAMTNLE 480>XP_006719213 Length = 750 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KAMTNLE 9 KAMTNLE Sbjct: 582 KAMTNLE 588>XP_006719212 Length = 750 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KAMTNLE 9 KAMTNLE Sbjct: 582 KAMTNLE 588>NP_006438 Length = 823 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA+ N+E Sbjct: 36 LKKALVNVE 44>NP_001001992 Length = 822 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA+ N+E Sbjct: 36 LKKALVNVE 44>NP_001027582 Length = 823 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKKA+ N+E Sbjct: 36 LKKALVNVE 44>NP_004730 Length = 668 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKAMTNLE 9 L+KA+T+LE Sbjct: 616 LRKALTHLE 624>NP_006209 Length = 1068 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKKAMTN 7 LKKA+TN Sbjct: 654 LKKALTN 660>NP_064544 Length = 1026 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKK++ NLE Sbjct: 758 LKKSINNLE 766>NP_001241878 Length = 596 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LKK++ NLE Sbjct: 328 LKKSINNLE 336>XP_006713721 Length = 1068 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKKAMTN 7 LKKA+TN Sbjct: 654 LKKALTN 660>NP_001073867 Length = 2017 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKKAMTNLE 9 LKK + NLE Sbjct: 2009 LKKTLENLE 2017>XP_005251911 Length = 1839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKKAMTNLE 9 LKK + NLE Sbjct: 1831 LKKTLENLE 1839>XP_005251910 Length = 1839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKKAMTNLE 9 LKK + NLE Sbjct: 1831 LKKTLENLE 1839>XP_005251909 Length = 1839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKKAMTNLE 9 LKK + NLE Sbjct: 1831 LKKTLENLE 1839>XP_005251908 Length = 1839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKKAMTNLE 9 LKK + NLE Sbjct: 1831 LKKTLENLE 1839>XP_005251907 Length = 1845 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKKAMTNLE 9 LKK + NLE Sbjct: 1837 LKKTLENLE 1845>NP_003787 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKKAMTNLE 9 LKK M N E Sbjct: 131 LKKVMKNFE 139>NP_001239570 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKKAMTNLE 9 LKK M N E Sbjct: 113 LKKVMKNFE 121>XP_005259420 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKKAMTNLE 9 LKK M N E Sbjct: 131 LKKVMKNFE 139>XP_005259419 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKKAMTNLE 9 LKK M N E Sbjct: 113 LKKVMKNFE 121>NP_001244068 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKKAMTNL 8 +KKA++NL Sbjct: 630 MKKAISNL 637>NP_000076 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKKAMTNL 8 +KKA++NL Sbjct: 673 MKKAISNL 680>NP_001159417 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKKAMTNL 8 +KKA++NL Sbjct: 503 MKKAISNL 510>NP_002356 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKKAMTNLE 9 LKKA N+E Sbjct: 153 LKKASFNME 161>NP_001035247 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LK+++ NLE Sbjct: 6 LKRSLRNLE 14>NP_001138786 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LK+++ NLE Sbjct: 6 LKRSLRNLE 14>NP_001008781 Length = 4557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKKAMTN 7 LKK++TN Sbjct: 635 LKKSLTN 641>NP_004061 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKKAMTNL 8 +KKA++NL Sbjct: 673 MKKAISNL 680>XP_005274567 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKKAMTNLE 9 LKKA N+E Sbjct: 153 LKKASFNME 161>XP_006723210 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKKAMTNL 8 L KA+TNL Sbjct: 70 LLKALTNL 77>XP_005263307 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LK+++ NLE Sbjct: 6 LKRSLRNLE 14>XP_006714391 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LK+++ NLE Sbjct: 6 LKRSLRNLE 14>XP_006714390 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKKAMTNLE 9 LK+++ NLE Sbjct: 6 LKRSLRNLE 14>XP_005245790 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKKAMTNL 8 +KKA++NL Sbjct: 672 MKKAISNL 679>XP_006710132 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKKAMTNL 8 +KKA++NL Sbjct: 504 MKKAISNL 511>NP_037366 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKKAMTNL 8 L KA+TNL Sbjct: 70 LLKALTNL 77>NP_001036169 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKKAMTNL 8 +KKA++NL Sbjct: 672 MKKAISNL 679>NP_060802 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KAMTNLE 9 K+MTNL+ Sbjct: 18 KSMTNLQ 24Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.119 0.281 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 325,042 Number of extensions: 517 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |