Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 19 869 XP_006713721 19 869 NP_116191 17 2528 NP_003165 17 2528 NP_068506 17 2528 XP_005254781 17 2528 XP_005254780 17 2528 XP_005254779 17 2528 XP_006717559 17 2528 XP_006717558 17 2528 XP_006717557 17 2528 XP_006717556 17 2528 XP_005252630 17 2528 XP_005252629 17 2528 XP_005252628 17 2528 XP_005252627 17 2528 XP_005252626 17 2528 XP_005252625 17 2528 XP_005252624 17 2528 XP_005252623 17 2528 XP_005252622 17 2528 XP_006717555 17 2528 XP_005252621 17 2528 NP_056364 17 4312 XP_005267570 17 4312 XP_006720171 17 4312 XP_005267569 17 4312 XP_005267568 17 4312 XP_006720170 17 4312 XP_006720169 17 4312 XP_006722597 16 5631 XP_006722596 16 5631 NP_002546 15 9605 NP_899056 15 9605 NP_001243275 15 9605 NP_689558 15 9605 NP_001026872 15 9605 NP_001243277 15 9605 NP_001243276 15 9605 XP_006725191 15 9605 XP_006725190 15 9605 XP_005257977 15 9605 XP_005253010 15 9605 XP_006718306 15 9605 XP_005253009 15 9605>NP_006209 Length = 1068 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAISTRD 8 LKAISTRD Sbjct: 531 LKAISTRD 538>XP_006713721 Length = 1068 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAISTRD 8 LKAISTRD Sbjct: 531 LKAISTRD 538>NP_116191 Length = 520 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKAISTRDR 9 LKA++T DR Sbjct: 198 LKAVTTEDR 206>NP_003165 Length = 1788 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 405 KAISTRNR 412>NP_068506 Length = 2214 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 831 KAISTRNR 838>XP_005254781 Length = 452 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKAISTRDR 9 LKA++T DR Sbjct: 198 LKAVTTEDR 206>XP_005254780 Length = 470 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKAISTRDR 9 LKA++T DR Sbjct: 198 LKAVTTEDR 206>XP_005254779 Length = 538 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKAISTRDR 9 LKA++T DR Sbjct: 198 LKAVTTEDR 206>XP_006717559 Length = 1866 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 483 KAISTRNR 490>XP_006717558 Length = 1908 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 483 KAISTRNR 490>XP_006717557 Length = 1940 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 515 KAISTRNR 522>XP_006717556 Length = 2024 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 599 KAISTRNR 606>XP_005252630 Length = 2256 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 831 KAISTRNR 838>XP_005252629 Length = 2256 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 831 KAISTRNR 838>XP_005252628 Length = 2256 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 831 KAISTRNR 838>XP_005252627 Length = 2256 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 831 KAISTRNR 838>XP_005252626 Length = 2260 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 877 KAISTRNR 884>XP_005252625 Length = 2277 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 852 KAISTRNR 859>XP_005252624 Length = 2292 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 909 KAISTRNR 916>XP_005252623 Length = 2302 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 877 KAISTRNR 884>XP_005252622 Length = 2308 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 909 KAISTRNR 916>XP_006717555 Length = 2328 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 903 KAISTRNR 910>XP_005252621 Length = 2334 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KAISTRDR 9 KAISTR+R Sbjct: 909 KAISTRNR 916>NP_056364 Length = 1163 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AISTRDR 9 A+STRDR Sbjct: 652 ALSTRDR 658>XP_005267570 Length = 1219 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AISTRDR 9 A+STRDR Sbjct: 708 ALSTRDR 714>XP_006720171 Length = 1240 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AISTRDR 9 A+STRDR Sbjct: 729 ALSTRDR 735>XP_005267569 Length = 1340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AISTRDR 9 A+STRDR Sbjct: 829 ALSTRDR 835>XP_005267568 Length = 1340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AISTRDR 9 A+STRDR Sbjct: 829 ALSTRDR 835>XP_006720170 Length = 1354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AISTRDR 9 A+STRDR Sbjct: 843 ALSTRDR 849>XP_006720169 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AISTRDR 9 A+STRDR Sbjct: 850 ALSTRDR 856>XP_006722597 Length = 714 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAISTRDR 9 L +STRDR Sbjct: 32 LSLLSTRDR 40>XP_006722596 Length = 718 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAISTRDR 9 L +STRDR Sbjct: 32 LSLLSTRDR 40>NP_002546 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKAISTRD 8 +KA+ST D Sbjct: 354 IKAVSTSD 361>NP_899056 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKAISTRD 8 +KA+ST D Sbjct: 354 IKAVSTSD 361>NP_001243275 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAISTRDR 9 LKA+ST R Sbjct: 499 LKALSTASR 507>NP_689558 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KAISTRD 8 +A+STRD Sbjct: 87 EAVSTRD 93>NP_001026872 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAISTRDR 9 LKA+ST R Sbjct: 499 LKALSTASR 507>NP_001243277 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAISTRDR 9 LKA+ST R Sbjct: 441 LKALSTASR 449>NP_001243276 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAISTRDR 9 LKA+ST R Sbjct: 553 LKALSTASR 561>XP_006725191 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKAISTRD 8 +KA+ST D Sbjct: 211 IKAVSTSD 218>XP_006725190 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKAISTRD 8 +KA+ST D Sbjct: 484 IKAVSTSD 491>XP_005257977 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KAISTRD 8 +A+STRD Sbjct: 87 EAVSTRD 93>XP_005253010 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKAISTRD 8 +KA+ST D Sbjct: 211 IKAVSTSD 218>XP_006718306 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKAISTRD 8 +KA+ST D Sbjct: 354 IKAVSTSD 361>XP_005253009 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKAISTRD 8 +KA+ST D Sbjct: 439 IKAVSTSD 446Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.130 0.324 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 332,499 Number of extensions: 411 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |