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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000360                                                              19     665
XP_005268094                                                           19     665
XP_005276467                                                           17    4312
NP_056161                                                              16    7355
NP_057646                                                              16    7355
XP_006720156                                                           16    7355
XP_006717211                                                           16    7355
NP_006454                                                              15    9605
NP_998787                                                              15    9605
NP_964010                                                              15    9605
NP_056261                                                              15    9605
NP_777358                                                              15    9605
NP_004126                                                              15    9605
NP_073744                                                              15    9605
NP_001030611                                                           15    9605
NP_065850                                                              15    9605
XP_006717993                                                           15    9605
XP_006717992                                                           15    9605
XP_006717991                                                           15    9605
XP_005252192                                                           15    9605
XP_005264148                                                           15    9605
XP_005264145                                                           15    9605
XP_006711984                                                           15    9605
XP_006711983                                                           15    9605
XP_006711822                                                           15    9605
XP_006711821                                                           15    9605

>NP_000360
          Length = 764

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LITSVDLYT 9
           LI SVDLYT
Sbjct: 469 LIASVDLYT 477



>XP_005268094
          Length = 764

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LITSVDLYT 9
           LI SVDLYT
Sbjct: 469 LIASVDLYT 477



>XP_005276467
          Length = 97

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  LITSVDLYT 9
          L+TSVDL T
Sbjct: 54 LLTSVDLPT 62



>NP_056161
          Length = 2539

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LITSVDLY 8
           LITS DL+
Sbjct: 583 LITSADLH 590



>NP_057646
          Length = 1049

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ITSVDLYT 9
           + S+DLYT
Sbjct: 825 VISLDLYT 832



>XP_006720156
          Length = 2497

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LITSVDLY 8
           LITS DL+
Sbjct: 583 LITSADLH 590



>XP_006717211
          Length = 853

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  ITSVDLYT 9
          +TSVDL T
Sbjct: 84 VTSVDLET 91



>NP_006454
          Length = 424

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 344 LSSVDLHT 351



>NP_998787
          Length = 424

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 344 LSSVDLHT 351



>NP_964010
          Length = 424

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 344 LSSVDLHT 351



>NP_056261
          Length = 2275

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    ITSVDLYT 9
            +TSV+ YT
Sbjct: 1444 LTSVETYT 1451



>NP_777358
          Length = 380

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LITSVDLY 8
           L TS+DLY
Sbjct: 135 LRTSLDLY 142



>NP_004126
          Length = 393

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LITSVDLY 8
           L TS+DLY
Sbjct: 135 LRTSLDLY 142



>NP_073744
          Length = 746

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LITSVDLY 8
           ++TSVD Y
Sbjct: 124 ILTSVDQY 131



>NP_001030611
          Length = 733

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LITSVDLY 8
           ++TSVD Y
Sbjct: 111 ILTSVDQY 118



>NP_065850
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 356 LSSVDLHT 363



>XP_006717993
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 356 LSSVDLHT 363



>XP_006717992
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 356 LSSVDLHT 363



>XP_006717991
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 356 LSSVDLHT 363



>XP_005252192
          Length = 735

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LITSVDLY 8
           ++TSVD Y
Sbjct: 113 ILTSVDQY 120



>XP_005264148
          Length = 289

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 209 LSSVDLHT 216



>XP_005264145
          Length = 424

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 344 LSSVDLHT 351



>XP_006711984
          Length = 457

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 391 LSSVDLHT 398



>XP_006711983
          Length = 471

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITSVDLYT 9
           ++SVDL+T
Sbjct: 391 LSSVDLHT 398



>XP_006711822
          Length = 2266

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    ITSVDLYT 9
            +TSV+ YT
Sbjct: 1435 LTSVETYT 1442



>XP_006711821
          Length = 2301

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    ITSVDLYT 9
            +TSV+ YT
Sbjct: 1470 LTSVETYT 1477



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.323    0.138    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 434,681
Number of extensions: 616
Number of successful extensions: 26
Number of sequences better than 10000.0: 26
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 26
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)