Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 665 NP_444254 19 665 NP_444253 19 665 NP_444255 19 665 XP_005247551 19 665 XP_005247550 19 665 XP_006713712 19 665 XP_005247549 19 665 NP_002935 17 3301 XP_006715611 17 3301 NP_001268703 17 4312 NP_001268706 17 4312 NP_001268704 17 4312 NP_036540 17 4312 NP_001268705 17 4312 NP_001268708 17 4312 NP_001268712 17 4312 NP_001268709 17 4312 NP_001268700 17 4312 NP_001268707 17 4312 NP_898869 17 4312 NP_001268701 17 4312 NP_001268713 17 4312 NP_001268702 17 4312 NP_001268711 17 4312 NP_001268710 17 4312 NP_898868 17 4312 XP_005260434 17 4312 XP_005260428 17 4312 XP_005260426 17 4312 XP_006723831 17 4312 XP_005260423 17 4312 XP_005260422 17 4312 XP_006723830 17 4312 XP_006723829 17 4312 XP_005260421 17 4312 XP_006723828 17 4312 XP_006723827 17 4312 XP_006723826 17 4312 XP_005260419 17 4312 XP_005260418 17 4312 XP_006723825 17 4312 XP_005260417 17 4312 XP_006723824 17 4312 XP_005260415 17 4312 XP_006723823 17 4312 XP_005260413 17 4312 NP_056127 16 7355 XP_005265906 16 7355 XP_006714896 16 7355 XP_006714407 16 7355 XP_006714405 16 7355 XP_005263349 16 7355 XP_005263348 16 7355 XP_005263347 16 7355 XP_005263346 16 7355 XP_005263345 16 7355 XP_005263344 16 7355 XP_005263343 16 7355 XP_005263342 16 7355 XP_005263341 16 7355 XP_005263340 16 7355 XP_005263339 16 7355 XP_005247739 16 7355 NP_079429 16 7355 NP_001116241 15 9605 NP_859065 15 9605 NP_597721 15 9605 NP_001007170 15 9605 NP_001438 15 9605 NP_115812 15 9605 NP_001157617 15 9605 NP_057107 15 9605 NP_001157616 15 9605 XP_005266254 15 9605 XP_005248722 15 9605 XP_006714824 15 9605>NP_444256 Length = 1794 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LISKESKLD 9 +ISKESKLD Sbjct: 278 VISKESKLD 286>NP_444254 Length = 1845 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LISKESKLD 9 +ISKESKLD Sbjct: 278 VISKESKLD 286>NP_444253 Length = 1914 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LISKESKLD 9 +ISKESKLD Sbjct: 278 VISKESKLD 286>NP_444255 Length = 1863 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LISKESKLD 9 +ISKESKLD Sbjct: 278 VISKESKLD 286>XP_005247551 Length = 1855 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LISKESKLD 9 +ISKESKLD Sbjct: 288 VISKESKLD 296>XP_005247550 Length = 1856 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LISKESKLD 9 +ISKESKLD Sbjct: 288 VISKESKLD 296>XP_006713712 Length = 1923 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LISKESKLD 9 +ISKESKLD Sbjct: 288 VISKESKLD 296>XP_005247549 Length = 1924 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LISKESKLD 9 +ISKESKLD Sbjct: 288 VISKESKLD 296>NP_002935 Length = 2347 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LISKESKLD 9 LISK KLD Sbjct: 232 LISKNQKLD 240>XP_006715611 Length = 2342 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LISKESKLD 9 LISK KLD Sbjct: 241 LISKNQKLD 249>NP_001268703 Length = 1168 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1156 LLPKESRLD 1164>NP_001268706 Length = 1163 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1151 LLPKESRLD 1159>NP_001268704 Length = 1234 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1222 LLPKESRLD 1230>NP_036540 Length = 1160 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1148 LLPKESRLD 1156>NP_001268705 Length = 1107 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1095 LLPKESRLD 1103>NP_001268708 Length = 920 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 908 LLPKESRLD 916>NP_001268712 Length = 1206 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1194 LLPKESRLD 1202>NP_001268709 Length = 892 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 880 LLPKESRLD 888>NP_001268700 Length = 1054 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1042 LLPKESRLD 1050>NP_001268707 Length = 1181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1169 LLPKESRLD 1177>NP_898869 Length = 1135 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1123 LLPKESRLD 1131>NP_001268701 Length = 1186 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1174 LLPKESRLD 1182>NP_001268713 Length = 1134 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1122 LLPKESRLD 1130>NP_001268702 Length = 1214 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1202 LLPKESRLD 1210>NP_001268711 Length = 1136 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1124 LLPKESRLD 1132>NP_001268710 Length = 1088 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1076 LLPKESRLD 1084>NP_898868 Length = 1188 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1176 LLPKESRLD 1184>XP_005260434 Length = 1061 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1049 LLPKESRLD 1057>XP_005260428 Length = 1142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1130 LLPKESRLD 1138>XP_005260426 Length = 1167 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1155 LLPKESRLD 1163>XP_006723831 Length = 1170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1158 LLPKESRLD 1166>XP_005260423 Length = 1186 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1174 LLPKESRLD 1182>XP_005260422 Length = 1188 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1176 LLPKESRLD 1184>XP_006723830 Length = 1189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1177 LLPKESRLD 1185>XP_006723829 Length = 1189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1177 LLPKESRLD 1185>XP_005260421 Length = 1189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1177 LLPKESRLD 1185>XP_006723828 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1183 LLPKESRLD 1191>XP_006723827 Length = 1208 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1196 LLPKESRLD 1204>XP_006723826 Length = 1208 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1196 LLPKESRLD 1204>XP_005260419 Length = 1209 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1197 LLPKESRLD 1205>XP_005260418 Length = 1213 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1201 LLPKESRLD 1209>XP_006723825 Length = 1214 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1202 LLPKESRLD 1210>XP_005260417 Length = 1214 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1202 LLPKESRLD 1210>XP_006723824 Length = 1216 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1204 LLPKESRLD 1212>XP_005260415 Length = 1233 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1221 LLPKESRLD 1229>XP_006723823 Length = 1233 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1221 LLPKESRLD 1229>XP_005260413 Length = 1241 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L+ KES+LD Sbjct: 1229 LLPKESRLD 1237>NP_056127 Length = 5005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3907 LSKESKL 3913>XP_005265906 Length = 1421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LISKESKLD 9 LISK K+D Sbjct: 1287 LISKAQKID 1295>XP_006714896 Length = 1461 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LISKESKLD 9 LISK K+D Sbjct: 1327 LISKAQKID 1335>XP_006714407 Length = 5004 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3906 LSKESKL 3912>XP_006714405 Length = 4103 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3005 LSKESKL 3011>XP_005263349 Length = 4410 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3312 LSKESKL 3318>XP_005263348 Length = 4443 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3345 LSKESKL 3351>XP_005263347 Length = 4640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3928 LSKESKL 3934>XP_005263346 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3885 LSKESKL 3891>XP_005263345 Length = 4991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3928 LSKESKL 3934>XP_005263344 Length = 5005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3907 LSKESKL 3913>XP_005263343 Length = 5009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3911 LSKESKL 3917>XP_005263342 Length = 5025 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3927 LSKESKL 3933>XP_005263341 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3928 LSKESKL 3934>XP_005263340 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3928 LSKESKL 3934>XP_005263339 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ISKESKL 8 +SKESKL Sbjct: 3928 LSKESKL 3934>XP_005247739 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LISKESKL 8 ++SKES+L Sbjct: 608 MVSKESRL 615>NP_079429 Length = 1461 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LISKESKLD 9 LISK K+D Sbjct: 1327 LISKAQKID 1335>NP_001116241 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LISKESKLD 9 L+S E KLD Sbjct: 225 LVSAELKLD 233>NP_859065 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LISKESKLD 9 L+S E KLD Sbjct: 225 LVSAELKLD 233>NP_597721 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISKESKLD 9 +SK S+LD Sbjct: 234 VSKSSRLD 241>NP_001007170 Length = 256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISKESKLD 9 +SK S+LD Sbjct: 234 VSKSSRLD 241>NP_001438 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LISKESKLD 9 LIS + KLD Sbjct: 1711 LISTQKKLD 1719>NP_115812 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKESKLD 9 SKE+K+D Sbjct: 666 SKENKMD 672>NP_001157617 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKESKLD 9 SKE+K+D Sbjct: 666 SKENKMD 672>NP_057107 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LISKESKLD 9 L +KE+K+D Sbjct: 102 LTTKENKID 110>NP_001157616 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKESKLD 9 SKE+K+D Sbjct: 666 SKENKMD 672>XP_005266254 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKESKLD 9 SKE+K+D Sbjct: 666 SKENKMD 672>XP_005248722 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LISKESKLD 9 L+S E KLD Sbjct: 225 LVSAELKLD 233>XP_006714824 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LISKESKLD 9 LIS + KLD Sbjct: 1711 LISTQKKLD 1719Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.124 0.282 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 426,590 Number of extensions: 740 Number of successful extensions: 77 Number of sequences better than 10000.0: 77 Number of HSP's gapped: 77 Number of HSP's successfully gapped: 77 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |