Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 19 869 NP_005913 19 869 XP_005267046 19 869 XP_005267045 19 869 NP_001138384 17 4312 NP_001129503 17 4312 NP_006386 17 4312 XP_006712999 17 4312 XP_005264860 17 4312 XP_006712998 17 4312 XP_006712997 17 4312 XP_006712996 17 4312 XP_006712995 17 4312 XP_006712994 17 4312 NP_066000 16 7355 NP_001189402 16 7355 NP_060736 16 7355 NP_001275677 16 7355 NP_071332 16 7355 NP_878907 16 7355 NP_001277026 16 7355 NP_001139808 16 7355 XP_005273981 16 7355 XP_006713781 16 7355 XP_005247635 16 7355 XP_005247634 16 7355 XP_006713750 16 7355 NP_057197 15 9605 NP_001259017 15 9605 NP_001259016 15 9605 NP_057664 15 9605 NP_079514 15 9605 NP_079203 15 9605 NP_001011885 15 9605 NP_060267 15 9605 NP_005062 15 9605 XP_005276813 15 9605 XP_006722907 15 9605 XP_006722906 15 9605 XP_006722905 15 9605 XP_005259650 15 9605 XP_006722159 15 9605 XP_006721606 15 9605 XP_006721605 15 9605 XP_006721604 15 9605 XP_005256733 15 9605 XP_006720636 15 9605 XP_005248455 15 9605 NP_001790 15 9605>NP_006715 Length = 1558 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LINAYLLLT 9 LI+AYLLLT Sbjct: 896 LIDAYLLLT 904>NP_005913 Length = 1608 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LINAYLLLT 9 LI+AYLLLT Sbjct: 896 LIDAYLLLT 904>XP_005267046 Length = 1554 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LINAYLLLT 9 LI+AYLLLT Sbjct: 896 LIDAYLLLT 904>XP_005267045 Length = 1604 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LINAYLLLT 9 LI+AYLLLT Sbjct: 896 LIDAYLLLT 904>NP_001138384 Length = 623 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+N +LLLT Sbjct: 127 LLNKFLLLT 135>NP_001129503 Length = 676 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+N +LLLT Sbjct: 127 LLNKFLLLT 135>NP_006386 Length = 703 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+N +LLLT Sbjct: 127 LLNKFLLLT 135>XP_006712999 Length = 685 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+N +LLLT Sbjct: 127 LLNKFLLLT 135>XP_005264860 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+N +LLLT Sbjct: 127 LLNKFLLLT 135>XP_006712998 Length = 699 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+N +LLLT Sbjct: 127 LLNKFLLLT 135>XP_006712997 Length = 701 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+N +LLLT Sbjct: 127 LLNKFLLLT 135>XP_006712996 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+N +LLLT Sbjct: 127 LLNKFLLLT 135>XP_006712995 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+N +LLLT Sbjct: 127 LLNKFLLLT 135>XP_006712994 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+N +LLLT Sbjct: 127 LLNKFLLLT 135>NP_066000 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LINAYLLL 8 L+N YL+L Sbjct: 641 LVNIYLML 648>NP_001189402 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 +INA L+LT Sbjct: 184 IINASLILT 192>NP_060736 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INAYLLLT 9 INA+++LT Sbjct: 327 INAFVMLT 334>NP_001275677 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NAYLLL 8 NAYLLL Sbjct: 329 NAYLLL 334>NP_071332 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INAYLLLT 9 +N YLL+T Sbjct: 136 LNRYLLIT 143>NP_878907 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NAYLLL 8 NAYLLL Sbjct: 329 NAYLLL 334>NP_001277026 Length = 142 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LINAYLLL 8 L+ AYLLL Sbjct: 48 LLQAYLLL 55>NP_001139808 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LINAYLLL 8 L+ AYLLL Sbjct: 129 LLQAYLLL 136>XP_005273981 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NAYLLL 8 NAYLLL Sbjct: 329 NAYLLL 334>XP_006713781 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LINAYLLL 8 L+N YL+L Sbjct: 641 LVNIYLML 648>XP_005247635 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INAYLLLT 9 INA+++LT Sbjct: 327 INAFVMLT 334>XP_005247634 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INAYLLLT 9 INA+++LT Sbjct: 327 INAFVMLT 334>XP_006713750 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INAYLLLT 9 INA+++LT Sbjct: 327 INAFVMLT 334>NP_057197 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+ AY+LLT Sbjct: 625 LLLAYVLLT 633>NP_001259017 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 56 NAFILLT 62>NP_001259016 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 56 NAFILLT 62>NP_057664 Length = 1184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NAYLLLT 9 N Y+LLT Sbjct: 408 NTYMLLT 414>NP_079514 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 179 NAFMLLT 185>NP_079203 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LINAYL 6 L+NAYL Sbjct: 742 LVNAYL 747>NP_001011885 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 179 NAFMLLT 185>NP_060267 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 221 NAFMLLT 227>NP_005062 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 56 NAFILLT 62>XP_005276813 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INAYLLLT 9 I AY+L+T Sbjct: 57 IKAYMLMT 64>XP_006722907 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 56 NAFILLT 62>XP_006722906 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 56 NAFILLT 62>XP_006722905 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 56 NAFILLT 62>XP_005259650 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 73 NAFMLLT 79>XP_006722159 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LINAYL 6 L+NAYL Sbjct: 739 LVNAYL 744>XP_006721606 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+ AY+LLT Sbjct: 625 LLLAYVLLT 633>XP_006721605 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+ AY+LLT Sbjct: 625 LLLAYVLLT 633>XP_006721604 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+ AY+LLT Sbjct: 625 LLLAYVLLT 633>XP_005256733 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LINAYLLLT 9 L+ AY+LLT Sbjct: 624 LLLAYVLLT 632>XP_006720636 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAYLLLT 9 NA++LLT Sbjct: 179 NAFMLLT 185>XP_005248455 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INAYLLLT 9 I AY+L+T Sbjct: 57 IKAYMLMT 64>NP_001790 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INAYLLLT 9 I AY+L+T Sbjct: 114 IKAYMLMT 121Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.151 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 417,515 Number of extensions: 491 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |