Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 20 390 NP_001276866 18 1135 NP_004439 18 1135 NP_001276865 18 1135 NP_001005862 18 1135 NP_001269346 18 1135 NP_001035915 18 1135 NP_689564 18 1135 NP_001257577 18 1135 XP_005257197 18 1135 XP_006721828 18 1135 XP_006721514 18 1135 XP_006721513 18 1135 XP_005256514 18 1135 NP_001036064 17 3301 NP_004963 17 3301 NP_005226 17 3301 NP_775267 17 3301 NP_775268 17 3301 NP_001128653 17 3301 NP_001011547 17 3301 NP_775266 17 3301 NP_004094 17 3301 XP_005251512 17 3301 XP_005273505 17 3301 XP_005273504 17 3301 XP_005246434 17 3301 XP_005246433 17 3301 XP_005246432 17 3301 XP_006712427 17 3301 NP_001003803 17 4312 XP_005267596 17 4312 NP_001003805 17 4312 NP_056499 17 4312 NP_112235 16 5631 NP_008864 16 5631 NP_001192209 16 5631 NP_001020330 16 5631 NP_001020329 16 5631 NP_004346 16 5631 XP_005259057 16 5631 XP_005259056 16 5631 XP_006723307 16 5631 XP_005259055 16 5631 XP_006714874 16 5631 NP_059128 16 5631 NP_060124 16 7355 NP_689892 16 7355 NP_001180236 16 7355 NP_001238831 15 9605 NP_003976 15 9605 NP_002218 15 9605 NP_940933 15 9605 XP_006722513 15 9605 XP_006722512 15 9605 XP_005266752 15 9605 XP_005266751 15 9605 XP_006722511 15 9605 XP_006722510 15 9605 XP_005266750 15 9605 XP_005266749 15 9605 XP_005266748 15 9605 XP_005266747 15 9605 XP_005270898 15 9605 XP_006710687 15 9605>NP_005219 Length = 1210 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 LI QLMPFG Sbjct: 788 LITQLMPFG 796>NP_001276866 Length = 1055 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+ QLMP+G Sbjct: 796 LVTQLMPYG 804>NP_004439 Length = 1255 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+ QLMP+G Sbjct: 796 LVTQLMPYG 804>NP_001276865 Length = 1240 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+ QLMP+G Sbjct: 781 LVTQLMPYG 789>NP_001005862 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+ QLMP+G Sbjct: 766 LVTQLMPYG 774>NP_001269346 Length = 566 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+M+LMP G Sbjct: 289 LVMELMPIG 297>NP_001035915 Length = 596 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+M+LMP G Sbjct: 356 LVMELMPIG 364>NP_689564 Length = 612 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+M+LMP G Sbjct: 372 LVMELMPIG 380>NP_001257577 Length = 569 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+M+LMP G Sbjct: 329 LVMELMPIG 337>XP_005257197 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+ QLMP+G Sbjct: 766 LVTQLMPYG 774>XP_006721828 Length = 1336 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+ QLMP+G Sbjct: 877 LVTQLMPYG 885>XP_006721514 Length = 596 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+M+LMP G Sbjct: 356 LVMELMPIG 364>XP_006721513 Length = 598 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+M+LMP G Sbjct: 321 LVMELMPIG 329>XP_005256514 Length = 633 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+M+LMP G Sbjct: 356 LVMELMPIG 364>NP_001036064 Length = 1292 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+ QLMP G Sbjct: 794 LVTQLMPHG 802>NP_004963 Length = 1132 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 LIM+ +P+G Sbjct: 927 LIMEYLPYG 935>NP_005226 Length = 1308 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+ QLMP G Sbjct: 794 LVTQLMPHG 802>NP_775267 Length = 967 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 +IM+L P+G Sbjct: 500 IIMELYPYG 508>NP_775268 Length = 1009 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 +IM+L P+G Sbjct: 500 IIMELYPYG 508>NP_001128653 Length = 706 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+M LMP G Sbjct: 398 LVMALMPVG 406>NP_001011547 Length = 681 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+M LMP G Sbjct: 373 LVMALMPVG 381>NP_775266 Length = 1009 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 +IM+L P+G Sbjct: 500 IIMELYPYG 508>NP_004094 Length = 1009 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 +IM+L P+G Sbjct: 500 IIMELYPYG 508>XP_005251512 Length = 1132 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 LIM+ +P+G Sbjct: 927 LIMEYLPYG 935>XP_005273505 Length = 997 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 +IM+L P+G Sbjct: 500 IIMELYPYG 508>XP_005273504 Length = 1009 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 +IM+L P+G Sbjct: 500 IIMELYPYG 508>XP_005246434 Length = 1282 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+ QLMP G Sbjct: 784 LVTQLMPHG 792>XP_005246433 Length = 1298 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+ QLMP G Sbjct: 784 LVTQLMPHG 792>XP_005246432 Length = 1307 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+ QLMP G Sbjct: 809 LVTQLMPHG 817>XP_006712427 Length = 1323 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+ QLMP G Sbjct: 809 LVTQLMPHG 817>NP_001003803 Length = 215 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLMPFG 9 Q+MPFG Sbjct: 15 QMMPFG 20>XP_005267596 Length = 178 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLMPFG 9 Q+MPFG Sbjct: 15 QMMPFG 20>NP_001003805 Length = 127 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLMPFG 9 Q+MPFG Sbjct: 15 QMMPFG 20>NP_056499 Length = 136 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLMPFG 9 Q+MPFG Sbjct: 15 QMMPFG 20>NP_112235 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIMQLMP 7 LIMQL+P Sbjct: 448 LIMQLIP 454>NP_008864 Length = 718 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIMQLMPFG 9 L+M+L+P G Sbjct: 354 LVMKLVPVG 362>NP_001192209 Length = 192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIMQLMP 7 L++QLMP Sbjct: 41 LVLQLMP 47>NP_001020330 Length = 296 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+MQ +P G Sbjct: 113 LLMQALPMG 121>NP_001020329 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+MQ +P G Sbjct: 113 LLMQALPMG 121>NP_004346 Length = 232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+MQ +P G Sbjct: 113 LLMQALPMG 121>XP_005259057 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIMQLMP 7 LIMQL+P Sbjct: 140 LIMQLIP 146>XP_005259056 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIMQLMP 7 LIMQL+P Sbjct: 140 LIMQLIP 146>XP_006723307 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIMQLMP 7 LIMQL+P Sbjct: 155 LIMQLIP 161>XP_005259055 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIMQLMP 7 LIMQL+P Sbjct: 155 LIMQLIP 161>XP_006714874 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 L+MQ +P G Sbjct: 190 LLMQALPMG 198>NP_059128 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIMQLMP 7 LIMQL+P Sbjct: 140 LIMQLIP 146>NP_060124 Length = 1589 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IMQLMPF 8 I+QL+PF Sbjct: 1210 ILQLIPF 1216>NP_689892 Length = 437 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IMQLMPFG 9 I+QL+P G Sbjct: 228 IVQLLPLG 235>NP_001180236 Length = 1589 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IMQLMPF 8 I+QL+PF Sbjct: 1210 ILQLIPF 1216>NP_001238831 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 ++M+L P G Sbjct: 194 MVMELAPLG 202>NP_003976 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 ++M+L P G Sbjct: 194 MVMELAPLG 202>NP_002218 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 LIM+ +P G Sbjct: 954 LIMEFLPSG 962>NP_940933 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 627 ILQLFPF 633>XP_006722513 Length = 787 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 267 ILQLFPF 273>XP_006722512 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 321 ILQLFPF 327>XP_005266752 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 627 ILQLFPF 633>XP_005266751 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 627 ILQLFPF 633>XP_006722511 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 627 ILQLFPF 633>XP_006722510 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 627 ILQLFPF 633>XP_005266750 Length = 1106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 627 ILQLFPF 633>XP_005266749 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 627 ILQLFPF 633>XP_005266748 Length = 1136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 627 ILQLFPF 633>XP_005266747 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IMQLMPF 8 I+QL PF Sbjct: 627 ILQLFPF 633>XP_005270898 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 LIM+ +P G Sbjct: 954 LIMEFLPSG 962>XP_006710687 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIMQLMPFG 9 LIM+ +P G Sbjct: 954 LIMEFLPSG 962Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.160 0.495 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 522,459 Number of extensions: 648 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |