Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 390 NP_001129157 18 1935 NP_996844 18 1935 XP_005254439 18 1935 XP_006720568 18 1935 XP_005254438 18 1935 NP_002335 18 1935 NP_001008540 17 3301 NP_003458 17 3301 NP_008905 16 5631 NP_008886 16 5631 NP_001265108 16 5631 NP_001265106 16 5631 NP_001265105 16 5631 NP_001265103 16 5631 NP_001265102 16 5631 NP_001265100 16 5631 NP_001265099 16 5631 NP_001265104 16 5631 NP_001265107 16 5631 XP_006718031 16 5631 XP_006718030 16 5631 XP_006718029 16 5631 XP_005271882 16 5631 XP_006718028 16 5631 XP_006718027 16 5631 NP_008885 16 5631 NP_001073867 16 7355 NP_001167594 16 7355 XP_006722587 16 7355 NP_598328 15 9605 NP_003169 15 9605 NP_056190 15 9605 NP_955749 15 9605 NP_689737 15 9605 NP_001153518 15 9605 NP_001171696 15 9605 NP_001153505 15 9605 NP_699177 15 9605 NP_001276936 15 9605 NP_001276937 15 9605 NP_057377 15 9605 NP_001276938 15 9605 NP_006409 15 9605 XP_005269015 15 9605 XP_005269014 15 9605 XP_006713376 15 9605 XP_006713375 15 9605 XP_006713374 15 9605 XP_005246402 15 9605 XP_006712393 15 9605 XP_005246401 15 9605>NP_004295 Length = 1620 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LIISKLNHQ 9 LIISK NHQ Sbjct: 1169 LIISKFNHQ 1177>NP_001129157 Length = 734 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LIISKLNHQ 9 LIISK HQ Sbjct: 433 LIISKFRHQ 441>NP_996844 Length = 803 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LIISKLNHQ 9 LIISK HQ Sbjct: 502 LIISKFRHQ 510>XP_005254439 Length = 475 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LIISKLNHQ 9 LIISK HQ Sbjct: 174 LIISKFRHQ 182>XP_006720568 Length = 771 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LIISKLNHQ 9 LIISK HQ Sbjct: 470 LIISKFRHQ 478>XP_005254438 Length = 819 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LIISKLNHQ 9 LIISK HQ Sbjct: 518 LIISKFRHQ 526>NP_002335 Length = 864 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LIISKLNHQ 9 LIISK HQ Sbjct: 563 LIISKFRHQ 571>NP_001008540 Length = 356 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 +IISKL+H Sbjct: 225 IIISKLSH 232>NP_003458 Length = 352 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 +IISKL+H Sbjct: 221 IIISKLSH 228>NP_008905 Length = 810 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 154 LVISKINY 161>NP_008886 Length = 778 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 155 LVISKINY 162>NP_001265108 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 43 LVISKINY 50>NP_001265106 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 176 LVISKINY 183>NP_001265105 Length = 768 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 112 LVISKINY 119>NP_001265103 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 43 LVISKINY 50>NP_001265102 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 173 LVISKINY 180>NP_001265100 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 43 LVISKINY 50>NP_001265099 Length = 817 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 161 LVISKINY 168>NP_001265104 Length = 733 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 77 LVISKINY 84>NP_001265107 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 43 LVISKINY 50>XP_006718031 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 43 LVISKINY 50>XP_006718030 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 43 LVISKINY 50>XP_006718029 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 43 LVISKINY 50>XP_005271882 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 43 LVISKINY 50>XP_006718028 Length = 791 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 168 LVISKINY 175>XP_006718027 Length = 792 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 169 LVISKINY 176>NP_008885 Length = 811 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIISKLNH 8 L+ISK+N+ Sbjct: 155 LVISKINY 162>NP_001073867 Length = 2017 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ISKLNH 8 ISK+NH Sbjct: 15 ISKINH 20>NP_001167594 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIISKLNHQ 9 LI+SK+ H+ Sbjct: 627 LIVSKIAHR 635>XP_006722587 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIISKLNHQ 9 LI+SK+ H+ Sbjct: 627 LIVSKIAHR 635>NP_598328 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIISKLN 7 L+ISK+N Sbjct: 409 LVISKMN 415>NP_003169 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIISKLN 7 L+ISK+N Sbjct: 409 LVISKMN 415>NP_056190 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIISKLN 7 LIIS+LN Sbjct: 467 LIISRLN 473>NP_955749 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIISKLN 7 LIIS+LN Sbjct: 467 LIISRLN 473>NP_689737 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IISKLNH 8 IIS++NH Sbjct: 722 IISEVNH 728>NP_001153518 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IISKLNH 8 IIS++NH Sbjct: 722 IISEVNH 728>NP_001171696 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IISKLNH 8 I+S++NH Sbjct: 132 IVSQINH 138>NP_001153505 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IISKLNH 8 IIS++NH Sbjct: 722 IISEVNH 728>NP_699177 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IISKLNH 8 I+S++NH Sbjct: 132 IVSQINH 138>NP_001276936 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ISKLNH 8 +SKLNH Sbjct: 198 MSKLNH 203>NP_001276937 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ISKLNH 8 +SKLNH Sbjct: 224 MSKLNH 229>NP_057377 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ISKLNH 8 +SKLNH Sbjct: 256 MSKLNH 261>NP_001276938 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ISKLNH 8 +SKLNH Sbjct: 100 MSKLNH 105>NP_006409 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIISKLN 7 ++ISKLN Sbjct: 405 MVISKLN 411>XP_005269015 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ISKLNH 8 +SKLNH Sbjct: 256 MSKLNH 261>XP_005269014 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ISKLNH 8 +SKLNH Sbjct: 256 MSKLNH 261>XP_006713376 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIISKLN 7 L+ISK+N Sbjct: 152 LVISKMN 158>XP_006713375 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIISKLN 7 L+ISK+N Sbjct: 248 LVISKMN 254>XP_006713374 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIISKLN 7 L+ISK+N Sbjct: 409 LVISKMN 415>XP_005246402 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IISKLNH 8 IIS++NH Sbjct: 722 IISEVNH 728>XP_006712393 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IISKLNH 8 IIS++NH Sbjct: 728 IISEVNH 734>XP_005246401 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IISKLNH 8 IIS++NH Sbjct: 728 IISEVNH 734Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.138 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 416,540 Number of extensions: 467 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |