Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057502 21 229 NP_861969 21 229 NP_000259 21 229 NP_861968 21 229 NP_861966 21 229 NP_861970 21 229 NP_861546 21 229 NP_861967 21 229 NP_588613 18 1482 NP_001008738 18 1482 XP_006717717 17 4312 XP_006717716 17 4312 XP_006717715 17 4312 XP_006717714 17 4312 XP_006717713 17 4312 XP_006717712 17 4312 XP_006717711 17 4312 XP_006717710 17 4312 XP_006717709 17 4312 XP_006717708 17 4312 NP_055448 17 4312 NP_001011705 16 5631 NP_008946 16 5631 NP_001185924 16 7355 NP_001005174 16 7355 NP_115859 15 9605 NP_061978 15 9605 NP_659489 15 9605 NP_000843 15 9605 NP_000203 15 9605 NP_055504 15 9605 NP_001277192 15 9605 NP_004517 15 9605 NP_001193973 15 9605 NP_002204 15 9605 NP_060787 15 9605 NP_060733 15 9605 NP_064601 15 9605 NP_775899 15 9605 XP_005248229 15 9605 XP_006714030 15 9605 XP_005247493 15 9605 XP_006713118 15 9605 XP_006712687 15 9605 XP_006712686 15 9605 XP_006712685 15 9605 XP_006712684 15 9605 XP_006712683 15 9605 XP_006712682 15 9605 XP_006712681 15 9605 XP_005246730 15 9605 XP_005246729 15 9605 XP_006712680 15 9605 XP_006712679 15 9605 XP_006712103 15 9605 XP_006712102 15 9605 XP_005245478 15 9605 XP_005245477 15 9605 XP_005245476 15 9605 XP_005245475 15 9605>NP_057502 Length = 590 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIGDSMSFD 9 LIGDS+SFD Sbjct: 500 LIGDSLSFD 508>NP_861969 Length = 507 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIGDSMSFD 9 LIGDS+SFD Sbjct: 417 LIGDSLSFD 425>NP_000259 Length = 595 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIGDSMSFD 9 LIGDS+SFD Sbjct: 500 LIGDSLSFD 508>NP_861968 Length = 507 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIGDSMSFD 9 LIGDS+SFD Sbjct: 417 LIGDSLSFD 425>NP_861966 Length = 548 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIGDSMSFD 9 LIGDS+SFD Sbjct: 458 LIGDSLSFD 466>NP_861970 Length = 590 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIGDSMSFD 9 LIGDS+SFD Sbjct: 500 LIGDSLSFD 508>NP_861546 Length = 590 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIGDSMSFD 9 LIGDS+SFD Sbjct: 500 LIGDSLSFD 508>NP_861967 Length = 549 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIGDSMSFD 9 LIGDS+SFD Sbjct: 459 LIGDSLSFD 467>NP_588613 Length = 1166 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LIGDSMSFD 9 LIGDSMS D Sbjct: 754 LIGDSMSPD 762>NP_001008738 Length = 1138 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LIGDSMSFD 9 LIGDSMS D Sbjct: 726 LIGDSMSPD 734>XP_006717717 Length = 859 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717716 Length = 1619 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717715 Length = 1660 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717714 Length = 1665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717713 Length = 1666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717712 Length = 1670 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717711 Length = 1677 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717710 Length = 1706 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717709 Length = 1712 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717708 Length = 1717 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMSF Sbjct: 203 GDSMSF 208>NP_055448 Length = 1173 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IGDSMSFD 9 +GD M FD Sbjct: 799 VGDKMRFD 806>NP_001011705 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GDSMSFD 9 G+SM+FD Sbjct: 266 GESMTFD 272>NP_008946 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GDSMSFD 9 G+SM+FD Sbjct: 267 GESMTFD 273>NP_001185924 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LIGDSMS 7 LIGD MS Sbjct: 39 LIGDGMS 45>NP_001005174 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LIGDSMSF 8 L+GD +SF Sbjct: 310 LLGDKVSF 317>NP_115859 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMS+ Sbjct: 586 GDSMSY 591>NP_061978 Length = 4242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDSMS+ Sbjct: 4155 GDSMSY 4160>NP_659489 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GDSMSFD 9 GDS S+D Sbjct: 83 GDSSSYD 89>NP_000843 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LIGDSMSF 8 ++GD +SF Sbjct: 144 IVGDQISF 151>NP_000203 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IGDSMSF 8 IGD++SF Sbjct: 417 IGDTVSF 423>NP_055504 Length = 2186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1319 LIGSTLRFD 1327>NP_001277192 Length = 2180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1313 LIGSTLRFD 1321>NP_004517 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LIGDSMSFD 9 LIGD M D Sbjct: 72 LIGDGMERD 80>NP_001193973 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IGDSMSFD 9 +GD SFD Sbjct: 3 MGDDKSFD 10>NP_002204 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IGDSMSFD 9 IGD+ SF+ Sbjct: 418 IGDTASFE 425>NP_060787 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDS+SF Sbjct: 173 GDSLSF 178>NP_060733 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IGDSMSF 8 +GD MSF Sbjct: 1354 VGDVMSF 1360>NP_064601 Length = 650 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LIGDSMSFD 9 L+GD FD Sbjct: 427 LVGDQDQFD 435>NP_775899 Length = 4462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LIGDSMSFD 9 L GDS FD Sbjct: 1513 LPGDSQRFD 1521>XP_005248229 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDS+SF Sbjct: 108 GDSLSF 113>XP_006714030 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDSMSF 8 GDS+SF Sbjct: 142 GDSLSF 147>XP_005247493 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IGDSMSFD 9 IGD+ SF+ Sbjct: 388 IGDTASFE 395>XP_006713118 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IGDSMSFD 9 +GD SFD Sbjct: 3 MGDDKSFD 10>XP_006712687 Length = 2166 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1323 LIGSTLRFD 1331>XP_006712686 Length = 2173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1332 LIGSTLRFD 1340>XP_006712685 Length = 2175 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1332 LIGSTLRFD 1340>XP_006712684 Length = 2189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1313 LIGSTLRFD 1321>XP_006712683 Length = 2195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1319 LIGSTLRFD 1327>XP_006712682 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1323 LIGSTLRFD 1331>XP_006712681 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1332 LIGSTLRFD 1340>XP_005246730 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1332 LIGSTLRFD 1340>XP_005246729 Length = 2201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1332 LIGSTLRFD 1340>XP_006712680 Length = 2206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1332 LIGSTLRFD 1340>XP_006712679 Length = 2208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LIGDSMSFD 9 LIG ++ FD Sbjct: 1332 LIGSTLRFD 1340>XP_006712103 Length = 1175 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IGDSMSF 8 +GD MSF Sbjct: 1094 VGDVMSF 1100>XP_006712102 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IGDSMSF 8 +GD MSF Sbjct: 1232 VGDVMSF 1238>XP_005245478 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LIGDSMSFD 9 L+GD FD Sbjct: 137 LVGDQDQFD 145>XP_005245477 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LIGDSMSFD 9 L+GD FD Sbjct: 137 LVGDQDQFD 145>XP_005245476 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LIGDSMSFD 9 L+GD FD Sbjct: 223 LVGDQDQFD 231>XP_005245475 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LIGDSMSFD 9 L+GD FD Sbjct: 296 LVGDQDQFD 304Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.144 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,829 Number of extensions: 932 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |