Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1935 XP_006716142 18 1935 XP_005250088 18 1935 XP_006716141 18 1935 XP_005250085 18 1935 XP_006716140 18 1935 XP_005250084 18 1935 XP_005250083 18 1935 XP_005250082 18 1935 NP_057407 17 3301 NP_570711 17 4312 NP_570712 17 4312 NP_570714 17 4312 NP_570713 17 4312 NP_570716 17 4312 NP_000235 17 4312 NP_570715 17 4312 NP_115525 17 4312 XP_006718620 17 4312 XP_005274059 17 4312 XP_005274060 17 4312 XP_005274058 17 4312 NP_000341 16 7355 NP_001034842 16 7355 XP_006712080 16 7355 XP_006712079 16 7355 NP_079052 15 9605 NP_001005407 15 9605 NP_066921 15 9605 NP_001030175 15 9605 NP_056013 15 9605 NP_001274365 15 9605 XP_006721028 15 9605 XP_006721027 15 9605 XP_005255709 15 9605 XP_006721026 15 9605 XP_005254732 15 9605 XP_005254731 15 9605 XP_006720754 15 9605 XP_005254729 15 9605 XP_005254730 15 9605 XP_005254728 15 9605 XP_005254727 15 9605 XP_005271814 15 9605 XP_005271813 15 9605 XP_006715738 15 9605 XP_005271812 15 9605 XP_005271810 15 9605 XP_005271809 15 9605 XP_005271808 15 9605 XP_005271807 15 9605>NP_733751 Length = 4911 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LHTDSLLIA 9 L TDSLLIA Sbjct: 596 LDTDSLLIA 604>XP_006716142 Length = 4927 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LHTDSLLIA 9 L TDSLLIA Sbjct: 597 LDTDSLLIA 605>XP_005250088 Length = 4928 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LHTDSLLIA 9 L TDSLLIA Sbjct: 597 LDTDSLLIA 605>XP_006716141 Length = 4959 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LHTDSLLIA 9 L TDSLLIA Sbjct: 597 LDTDSLLIA 605>XP_005250085 Length = 4979 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LHTDSLLIA 9 L TDSLLIA Sbjct: 597 LDTDSLLIA 605>XP_006716140 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LHTDSLLIA 9 L TDSLLIA Sbjct: 597 LDTDSLLIA 605>XP_005250084 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LHTDSLLIA 9 L TDSLLIA Sbjct: 597 LDTDSLLIA 605>XP_005250083 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LHTDSLLIA 9 L TDSLLIA Sbjct: 596 LDTDSLLIA 604>XP_005250082 Length = 4983 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LHTDSLLIA 9 L TDSLLIA Sbjct: 597 LDTDSLLIA 605>NP_057407 Length = 1024 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LHTDSLL 7 LHTD+LL Sbjct: 645 LHTDTLL 651>NP_570711 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 249 LHTDSL 254>NP_570712 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 254 LHTDSL 259>NP_570714 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 254 LHTDSL 259>NP_570713 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 254 LHTDSL 259>NP_570716 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 254 LHTDSL 259>NP_000235 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 254 LHTDSL 259>NP_570715 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 254 LHTDSL 259>NP_115525 Length = 359 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 191 LHTDSL 196>XP_006718620 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 249 LHTDSL 254>XP_005274059 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 249 LHTDSL 254>XP_005274060 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 249 LHTDSL 254>XP_005274058 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDSL Sbjct: 249 LHTDSL 254>NP_000341 Length = 2273 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HTDSLLI 8 H DSLLI Sbjct: 2225 HKDSLLI 2231>NP_001034842 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHTDSLLI 8 LH DS+L+ Sbjct: 1247 LHNDSVLL 1254>XP_006712080 Length = 924 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHTDSLLI 8 LH DS+L+ Sbjct: 213 LHNDSVLL 220>XP_006712079 Length = 1683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHTDSLLI 8 LH DS+L+ Sbjct: 1005 LHNDSVLL 1012>NP_079052 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 1293 LHTDAL 1298>NP_001005407 Length = 2347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 +HTDSL Sbjct: 2013 VHTDSL 2018>NP_066921 Length = 2353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 +HTDSL Sbjct: 2019 VHTDSL 2024>NP_001030175 Length = 225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTDS+ Sbjct: 27 LHTDSV 32>NP_056013 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 638 LHTDNL 643>NP_001274365 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 695 LHTDNL 700>XP_006721028 Length = 2336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 +HTDSL Sbjct: 2002 VHTDSL 2007>XP_006721027 Length = 2342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 +HTDSL Sbjct: 2008 VHTDSL 2013>XP_005255709 Length = 2347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 +HTDSL Sbjct: 2013 VHTDSL 2018>XP_006721026 Length = 2358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 +HTDSL Sbjct: 2024 VHTDSL 2029>XP_005254732 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 1293 LHTDAL 1298>XP_005254731 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 1293 LHTDAL 1298>XP_006720754 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 1293 LHTDAL 1298>XP_005254729 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 1293 LHTDAL 1298>XP_005254730 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 1293 LHTDAL 1298>XP_005254728 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 1293 LHTDAL 1298>XP_005254727 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 1293 LHTDAL 1298>XP_005271814 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 424 LHTDNL 429>XP_005271813 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 638 LHTDNL 643>XP_006715738 Length = 1229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 653 LHTDNL 658>XP_005271812 Length = 1245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 710 LHTDNL 715>XP_005271810 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 653 LHTDNL 658>XP_005271809 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 710 LHTDNL 715>XP_005271808 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 695 LHTDNL 700>XP_005271807 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LHTDSL 6 LHTD+L Sbjct: 710 LHTDNL 715Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.138 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 593,638 Number of extensions: 798 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |