Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000537                                                              20     390
NP_001263689                                                           20     390
NP_001119584                                                           20     390
NP_001119586                                                           20     390
NP_001263625                                                           20     390
NP_001119590                                                           20     390
NP_001263690                                                           20     390
NP_001119585                                                           20     390
NP_001263624                                                           20     390
NP_001119588                                                           20     390
NP_001119587                                                           20     390
NP_001119589                                                           20     390
NP_001263627                                                           20     390
NP_001263628                                                           20     390
NP_001263626                                                           20     390
XP_005254211                                                           17    2528
XP_005254210                                                           17    2528
XP_006720446                                                           17    2528
XP_005254209                                                           17    2528
XP_005254208                                                           17    2528
NP_003983                                                              17    2528
NP_001123500                                                           17    2528
NP_001010892                                                           17    3301
NP_001155136                                                           17    3301
XP_006715532                                                           17    3301
NP_001191121                                                           16    5631
NP_001119713                                                           16    5631
NP_001191117                                                           16    5631
NP_001119712                                                           16    5631
NP_001119714                                                           16    5631
NP_005418                                                              16    5631
NP_001191116                                                           16    5631
NP_001191115                                                           16    5631
NP_001191119                                                           16    5631
NP_001191113                                                           16    5631
NP_001191118                                                           16    5631
NP_001191120                                                           16    5631
NP_001191114                                                           16    5631
NP_775799                                                              16    5631
NP_689412                                                              16    5631
NP_689410                                                              16    5631
NP_006231                                                              16    5631
NP_001257608                                                           16    5631
XP_006724563                                                           16    5631
XP_005274611                                                           16    5631
XP_005274610                                                           16    5631
XP_006720471                                                           16    5631
XP_006710446                                                           16    5631
NP_065863                                                              16    7355
NP_005214                                                              16    7355
NP_077816                                                              16    7355
NP_000909                                                              16    7355
NP_602297                                                              16    7355
NP_001184225                                                           16    7355
NP_001184224                                                           16    7355
XP_005260057                                                           16    7355
XP_006722866                                                           16    7355
XP_006722865                                                           16    7355
XP_005260058                                                           16    7355
XP_006720917                                                           16    7355
XP_005255206                                                           16    7355
XP_005255205                                                           16    7355
XP_006720916                                                           16    7355
XP_006720915                                                           16    7355
XP_006720682                                                           16    7355
XP_005268318                                                           16    7355
NP_001384                                                              16    7355
NP_001104026                                                           15    9605
NP_001019820                                                           15    9605
NP_001737                                                              15    9605
NP_001447                                                              15    9605
NP_006185                                                              15    9605
NP_002903                                                              15    9605
NP_001273361                                                           15    9605
NP_001273360                                                           15    9605
NP_758872                                                              15    9605
NP_001073929                                                           15    9605
NP_115605                                                              15    9605
NP_001165906                                                           15    9605
NP_036365                                                              15    9605
NP_066953                                                              15    9605
NP_002229                                                              15    9605
XP_006720218                                                           15    9605
XP_005267148                                                           15    9605
XP_005267147                                                           15    9605
XP_006715607                                                           15    9605
XP_006715606                                                           15    9605
XP_006713676                                                           15    9605
XP_005247478                                                           15    9605
>NP_000537
          Length = 393

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 265 LGRNSFEV 272
>NP_001263689
          Length = 354

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 226 LGRNSFEV 233
>NP_001119584
          Length = 393

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 265 LGRNSFEV 272
>NP_001119586
          Length = 341

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 265 LGRNSFEV 272
>NP_001263625
          Length = 302

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 226 LGRNSFEV 233
>NP_001119590
          Length = 354

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 226 LGRNSFEV 233
>NP_001263690
          Length = 354

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 226 LGRNSFEV 233
>NP_001119585
          Length = 346

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 265 LGRNSFEV 272
>NP_001263624
          Length = 307

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 226 LGRNSFEV 233
>NP_001119588
          Length = 209

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 133 LGRNSFEV 140
>NP_001119587
          Length = 261

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 133 LGRNSFEV 140
>NP_001119589
          Length = 214

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 133 LGRNSFEV 140
>NP_001263627
          Length = 182

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 106 LGRNSFEV 113
>NP_001263628
          Length = 187

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 106 LGRNSFEV 113
>NP_001263626
          Length = 234

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LGRNSFEV 8
           LGRNSFEV
Sbjct: 106 LGRNSFEV 113
>XP_005254211
          Length = 269

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  LGRNSFEVL 9
          LG+N+FE L
Sbjct: 18 LGKNTFEFL 26
>XP_005254210
          Length = 490

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           LG+N+FE L
Sbjct: 239 LGKNTFEFL 247
>XP_006720446
          Length = 504

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           LG+N+FE L
Sbjct: 253 LGKNTFEFL 261
>XP_005254209
          Length = 504

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           LG+N+FE L
Sbjct: 253 LGKNTFEFL 261
>XP_005254208
          Length = 652

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           LG+N+FE L
Sbjct: 401 LGKNTFEFL 409
>NP_003983
          Length = 490

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           LG+N+FE L
Sbjct: 239 LGKNTFEFL 247
>NP_001123500
          Length = 638

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           LG+N+FE L
Sbjct: 387 LGKNTFEFL 395
>NP_001010892
          Length = 716

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GRNSFE 7
           GRNSFE
Sbjct: 519 GRNSFE 524
>NP_001155136
          Length = 600

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GRNSFE 7
           GRNSFE
Sbjct: 519 GRNSFE 524
>XP_006715532
          Length = 632

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GRNSFE 7
           GRNSFE
Sbjct: 519 GRNSFE 524
>NP_001191121
          Length = 565

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 214 LGRRSFE 220

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 290 GRENFEIL 297
>NP_001119713
          Length = 450

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 236 LGRRSFE 242

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 312 GRENFEIL 319
>NP_001191117
          Length = 540

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 285 LGRRSFE 291

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 361 GRENFEIL 368
>NP_001119712
          Length = 587

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 236 LGRRSFE 242

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 312 GRENFEIL 319
>NP_001119714
          Length = 426

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 236 LGRRSFE 242

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 312 GRENFEIL 319
>NP_005418
          Length = 636

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 285 LGRRSFE 291

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 361 GRENFEIL 368
>NP_001191116
          Length = 555

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 285 LGRRSFE 291

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 361 GRENFEIL 368
>NP_001191115
          Length = 403

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 285 LGRRSFE 291

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 361 GRENFEIL 368
>NP_001191119
          Length = 506

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 236 LGRRSFE 242

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 312 GRENFEIL 319
>NP_001191113
          Length = 499

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 285 LGRRSFE 291

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 361 GRENFEIL 368
>NP_001191118
          Length = 354

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 236 LGRRSFE 242

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 312 GRENFEIL 319
>NP_001191120
          Length = 491

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 236 LGRRSFE 242

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 312 GRENFEIL 319
>NP_001191114
          Length = 475

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LGRNSFE 7
           LGR SFE
Sbjct: 285 LGRRSFE 291

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           GR +FE+L
Sbjct: 361 GRENFEIL 368
>NP_775799
          Length = 301

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           +GRN+F +L
Sbjct: 122 IGRNTFIIL 130
>NP_689412
          Length = 591

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           G+NS E+L
Sbjct: 206 GKNSIEIL 213
>NP_689410
          Length = 625

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           G+NS E+L
Sbjct: 206 GKNSIEIL 213
>NP_006231
          Length = 653

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           G+NS E+L
Sbjct: 206 GKNSIEIL 213
>NP_001257608
          Length = 330

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           +G+N FE+L
Sbjct: 173 VGQNGFELL 181
>XP_006724563
          Length = 563

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           G+NS E+L
Sbjct: 116 GKNSIEIL 123
>XP_005274611
          Length = 588

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           G+NS E+L
Sbjct: 141 GKNSIEIL 148
>XP_005274610
          Length = 653

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GRNSFEVL 9
           G+NS E+L
Sbjct: 206 GKNSIEIL 213
>XP_006720471
          Length = 276

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           +GRN+F +L
Sbjct: 97  IGRNTFIIL 105
>XP_006710446
          Length = 1239

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  GRNSFEV 8
          G+NSF+V
Sbjct: 6  GKNSFQV 12
>NP_065863
          Length = 2047

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LGRNSFEVL 9
           LGR +FE +
Sbjct: 800 LGRGAFEAM 808
>NP_005214
          Length = 282

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LGRNSFE 7
          LGRNS++
Sbjct: 93 LGRNSYK 99
>NP_077816
          Length = 1499

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           LGR +FE+L
Sbjct: 729 LGRLTFELL 737
>NP_000909
          Length = 508

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GRNSFE 7
           GRN+FE
Sbjct: 212 GRNNFE 217
>NP_602297
          Length = 224

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GRNSFE 7
           GRNSF+
Sbjct: 196 GRNSFQ 201
>NP_001184225
          Length = 643

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   LGRNSFEVL 9
           LG+N F ++
Sbjct: 449 LGKNKFRII 457
>NP_001184224
          Length = 677

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   LGRNSFEVL 9
           LG+N F ++
Sbjct: 449 LGKNKFRII 457
>XP_005260057
          Length = 2113

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LGRNSFEVL 9
           LGR +FE +
Sbjct: 800 LGRGAFEAM 808
>XP_006722866
          Length = 1778

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LGRNSFEVL 9
           LGR +FE +
Sbjct: 496 LGRGAFEAM 504
>XP_006722865
          Length = 2078

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LGRNSFEVL 9
           LGR +FE +
Sbjct: 800 LGRGAFEAM 808
>XP_005260058
          Length = 2082

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LGRNSFEVL 9
           LGR +FE +
Sbjct: 800 LGRGAFEAM 808
>XP_006720917
          Length = 213

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LGRNSFE 7
          LGRNS++
Sbjct: 24 LGRNSYK 30
>XP_005255206
          Length = 213

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LGRNSFE 7
          LGRNS++
Sbjct: 24 LGRNSYK 30
>XP_005255205
          Length = 276

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LGRNSFE 7
          LGRNS++
Sbjct: 93 LGRNSYK 99
>XP_006720916
          Length = 282

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LGRNSFE 7
          LGRNS++
Sbjct: 93 LGRNSYK 99
>XP_006720915
          Length = 282

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LGRNSFE 7
          LGRNS++
Sbjct: 93 LGRNSYK 99
>XP_006720682
          Length = 803

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           LGR +FE+L
Sbjct: 729 LGRLTFELL 737
>XP_005268318
          Length = 1499

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LGRNSFEVL 9
           LGR +FE+L
Sbjct: 729 LGRLTFELL 737
>NP_001384
          Length = 699

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   LGRNSFEVL 9
           LG+N F ++
Sbjct: 471 LGKNKFRII 479
>NP_001104026
          Length = 2647

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LGRNSFEV 8
           +GR+ FEV
Sbjct: 561 IGRSPFEV 568
>NP_001019820
          Length = 592

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NSFEVL 9
           NSFE+L
Sbjct: 246 NSFEIL 251
>NP_001737
          Length = 592

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NSFEVL 9
           NSFE+L
Sbjct: 246 NSFEIL 251
>NP_001447
          Length = 2639

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LGRNSFEV 8
           +GR+ FEV
Sbjct: 561 IGRSPFEV 568
>NP_006185
          Length = 341

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LGRNSF 6
           LGRN+F
Sbjct: 228 LGRNNF 233
>NP_002903
          Length = 3130

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LGRNSF 6
           LG+NSF
Sbjct: 702 LGKNSF 707
>NP_001273361
          Length = 3052

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LGRNSF 6
           LG+NSF
Sbjct: 624 LGKNSF 629
>NP_001273360
          Length = 3052

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LGRNSF 6
           LG+NSF
Sbjct: 624 LGKNSF 629
>NP_758872
          Length = 989

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  NSFEVL 9
          NSFE+L
Sbjct: 93 NSFEIL 98
>NP_001073929
          Length = 560

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   LGRNSFEV 8
           L RN FEV
Sbjct: 172 LKRNQFEV 179
>NP_115605
          Length = 841

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LGRNSFEVL 9
           LG N  EVL
Sbjct: 394 LGNNRIEVL 402
>NP_001165906
          Length = 988

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LGRNSFE 7
           LGR++FE
Sbjct: 345 LGRSAFE 351
>NP_036365
          Length = 981

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LGRNSFE 7
           LGR++FE
Sbjct: 345 LGRSAFE 351
>NP_066953
          Length = 165

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  LGRNSFEV 8
          LGR SFE+
Sbjct: 17 LGRVSFEL 24
>NP_002229
          Length = 962

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  NSFEVL 9
          NSFE+L
Sbjct: 93 NSFEIL 98
>XP_006720218
          Length = 382

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LGRNSF 6
           LGRN+F
Sbjct: 228 LGRNNF 233
>XP_005267148
          Length = 2679

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LGRNSF 6
           LG+NSF
Sbjct: 702 LGKNSF 707
>XP_005267147
          Length = 2689

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LGRNSF 6
           LG+NSF
Sbjct: 702 LGKNSF 707
>XP_006715607
          Length = 3052

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LGRNSF 6
           LG+NSF
Sbjct: 624 LGKNSF 629
>XP_006715606
          Length = 3130

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   LGRNSF 6
           LG+NSF
Sbjct: 702 LGKNSF 707
>XP_006713676
          Length = 560

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   LGRNSFEV 8
           L RN FEV
Sbjct: 172 LKRNQFEV 179
>XP_005247478
          Length = 560

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   LGRNSFEV 8
           L RN FEV
Sbjct: 172 LKRNQFEV 179
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.325    0.146    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 536,775
Number of extensions: 1092
Number of successful extensions: 102
Number of sequences better than 10000.0: 89
Number of HSP's gapped: 102
Number of HSP's successfully gapped: 102
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package