Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 17 2528 NP_671714 17 2528 XP_006715890 17 2528 XP_005250160 17 2528 XP_005250159 17 2528 NP_055495 17 3301 XP_006722261 17 3301 XP_005258130 17 3301 NP_001106677 17 4312 NP_001275635 16 7355 NP_000868 16 7355 NP_477352 16 7355 NP_065987 16 7355 NP_002641 16 7355 NP_006050 16 7355 NP_005039 16 7355 XP_005261692 16 7355 XP_005261691 16 7355 XP_005263991 16 7355 XP_005263989 16 7355 XP_005263990 16 7355 XP_005263988 16 7355 XP_005263987 16 7355 XP_005263986 16 7355 NP_001264156 15 9605 NP_003658 15 9605 NP_001264155 15 9605 NP_055537 15 9605 NP_001273374 15 9605 NP_001269323 15 9605 NP_006639 15 9605 XP_006717302 15 9605 XP_005252201 15 9605 XP_005252200 15 9605 XP_006717301 15 9605 XP_005252199 15 9605 XP_005252198 15 9605 XP_005252197 15 9605 XP_006717300 15 9605 XP_005252196 15 9605 XP_005252195 15 9605 XP_005252194 15 9605 XP_006715343 15 9605 XP_006715342 15 9605 XP_006715341 15 9605 XP_006715340 15 9605 XP_006715339 15 9605 XP_006715338 15 9605>NP_005742 Length = 3907 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISELESQ Sbjct: 2606 LRISELESQ 2614>NP_671714 Length = 3899 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISELESQ Sbjct: 2598 LRISELESQ 2606>XP_006715890 Length = 3860 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISELESQ Sbjct: 2559 LRISELESQ 2567>XP_005250160 Length = 3939 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISELESQ Sbjct: 2638 LRISELESQ 2646>XP_005250159 Length = 3952 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISELESQ Sbjct: 2651 LRISELESQ 2659>NP_055495 Length = 2235 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 LGI+ELE Q Sbjct: 1927 LGIAELELQ 1935>XP_006722261 Length = 2092 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 LGI+ELE Q Sbjct: 1784 LGIAELELQ 1792>XP_005258130 Length = 2234 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 LGI+ELE Q Sbjct: 1926 LGIAELELQ 1934>NP_001106677 Length = 74 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GISELES 8 G+SELES Sbjct: 3 GVSELES 9>NP_001275635 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISE+ES+ Sbjct: 296 LNISEIESR 304>NP_000868 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISE+ES+ Sbjct: 296 LNISEIESR 304>NP_477352 Length = 2102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GISELESQ 9 G+SELE + Sbjct: 1813 GVSELEKE 1820>NP_065987 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGISELE 7 LGIS+LE Sbjct: 591 LGISDLE 597>NP_002641 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GISELESQ 9 G+SELE + Sbjct: 565 GVSELEKE 572>NP_006050 Length = 1575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GISELESQ 9 G+SE+E Q Sbjct: 1463 GLSEMEQQ 1470>NP_005039 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGISELES 8 +G+ ELES Sbjct: 205 IGVKELES 212>XP_005261692 Length = 1854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GISELESQ 9 G+SELE + Sbjct: 1565 GVSELEKE 1572>XP_005261691 Length = 2099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GISELESQ 9 G+SELE + Sbjct: 1810 GVSELEKE 1817>XP_005263991 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISE+ES+ Sbjct: 296 LNISEIESR 304>XP_005263989 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISE+ES+ Sbjct: 296 LNISEIESR 304>XP_005263990 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISE+ES+ Sbjct: 296 LNISEIESR 304>XP_005263988 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISE+ES+ Sbjct: 296 LNISEIESR 304>XP_005263987 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISE+ES+ Sbjct: 296 LNISEIESR 304>XP_005263986 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LGISELESQ 9 L ISE+ES+ Sbjct: 296 LNISEIESR 304>NP_001264156 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGISELES 8 LG+SEL S Sbjct: 55 LGLSELPS 62>NP_003658 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGISELES 8 LG+SEL S Sbjct: 55 LGLSELPS 62>NP_001264155 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGISELES 8 LG+SEL S Sbjct: 55 LGLSELPS 62>NP_055537 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GISELES 8 G+S+LES Sbjct: 895 GVSDLES 901>NP_001273374 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GISELES 8 G+S+LES Sbjct: 874 GVSDLES 880>NP_001269323 Length = 2297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1945 ISELQSQ 1951>NP_006639 Length = 2217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1908 ISELQSQ 1914>XP_006717302 Length = 2148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1908 ISELQSQ 1914>XP_005252201 Length = 2185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1908 ISELQSQ 1914>XP_005252200 Length = 2208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1856 ISELQSQ 1862>XP_006717301 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1908 ISELQSQ 1914>XP_005252199 Length = 2215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1863 ISELQSQ 1869>XP_005252198 Length = 2217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1908 ISELQSQ 1914>XP_005252197 Length = 2224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1908 ISELQSQ 1914>XP_006717300 Length = 2227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1908 ISELQSQ 1914>XP_005252196 Length = 2242 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1908 ISELQSQ 1914>XP_005252195 Length = 2259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1907 ISELQSQ 1913>XP_005252194 Length = 2260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ISELESQ 9 ISEL+SQ Sbjct: 1908 ISELQSQ 1914>XP_006715343 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GISELES 8 G+S+LES Sbjct: 845 GVSDLES 851>XP_006715342 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GISELES 8 G+S+LES Sbjct: 845 GVSDLES 851>XP_006715341 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GISELES 8 G+S+LES Sbjct: 845 GVSDLES 851>XP_006715340 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GISELES 8 G+S+LES Sbjct: 845 GVSDLES 851>XP_006715339 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GISELES 8 G+S+LES Sbjct: 857 GVSDLES 863>XP_006715338 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GISELES 8 G+S+LES Sbjct: 879 GVSDLES 885Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.125 0.288 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 494,650 Number of extensions: 885 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |