Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 20 390 NP_009297 20 390 NP_001161710 20 390 NP_001161709 20 390 NP_001161708 20 390 NP_009298 20 390 NP_001129473 20 390 NP_005149 20 390 NP_001161711 20 390 XP_005245145 20 390 NP_001129472 20 390 NP_072089 17 4312 NP_001273572 17 4312 NP_057026 17 4312 XP_005272689 17 4312 XP_006716632 17 4312 XP_005250984 17 4312 XP_006716631 17 4312 XP_005250983 17 4312 NP_055132 16 5631 NP_061917 16 5631 XP_006712663 16 5631 XP_006712662 16 5631 XP_006712661 16 5631 XP_006712660 16 5631 NP_078966 16 7355 NP_001020016 16 7355 NP_001252538 16 7355 NP_964012 16 7355 NP_001036111 16 7355 NP_008865 16 7355 NP_055780 16 7355 NP_001248309 16 7355 NP_001252537 16 7355 NP_055906 16 7355 NP_001171671 16 7355 NP_006768 16 7355 XP_006723004 16 7355 XP_006720146 16 7355 XP_005267508 16 7355 XP_005265021 16 7355 XP_006713094 16 7355 XP_006713093 16 7355 XP_005265020 16 7355 XP_006713092 16 7355 XP_005265019 16 7355 XP_006713091 16 7355 XP_005265017 16 7355 XP_005265016 16 7355 XP_005265015 16 7355 XP_005265014 16 7355 XP_005265013 16 7355 XP_006712074 16 7355 XP_005264351 16 7355 XP_006712072 16 7355 XP_006712071 16 7355 XP_006710903 16 7355 NP_006479 16 7355 NP_001159450 15 9605 NP_055178 15 9605 NP_653308 15 9605 NP_001159449 15 9605 NP_001166104 15 9605 NP_001166103 15 9605 NP_002534 15 9605 NP_001264984 15 9605 NP_008985 15 9605 NP_001269163 15 9605 NP_001269162 15 9605 NP_001269161 15 9605 NP_002782 15 9605 XP_005266395 15 9605 XP_006719144 15 9605 XP_005271926 15 9605 XP_006714589 15 9605 XP_005271925 15 9605 XP_005263937 15 9605 XP_005263936 15 9605>NP_005148 Length = 1130 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 442 GIDLSQVY 449>NP_009297 Length = 1149 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 461 GIDLSQVY 468>NP_001161710 Length = 1058 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 467 GIDLSQVY 474>NP_001161709 Length = 1079 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 488 GIDLSQVY 495>NP_001161708 Length = 1161 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 467 GIDLSQVY 474>NP_009298 Length = 1182 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 488 GIDLSQVY 495>NP_001129473 Length = 542 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 467 GIDLSQVY 474>NP_005149 Length = 1167 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 473 GIDLSQVY 480>NP_001161711 Length = 1043 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 452 GIDLSQVY 459>XP_005245145 Length = 1146 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 452 GIDLSQVY 459>NP_001129472 Length = 1064 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GIDLSQVY 9 GIDLSQVY Sbjct: 473 GIDLSQVY 480>NP_072089 Length = 481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GIDLSQV 8 G+DLSQV Sbjct: 370 GLDLSQV 376>NP_001273572 Length = 361 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+DLS++ Sbjct: 162 LGVDLSKI 169>NP_057026 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+DLS++ Sbjct: 162 LGVDLSKI 169>XP_005272689 Length = 481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GIDLSQV 8 G+DLSQV Sbjct: 370 GLDLSQV 376>XP_006716632 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+DLS++ Sbjct: 41 LGVDLSKI 48>XP_005250984 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+DLS++ Sbjct: 41 LGVDLSKI 48>XP_006716631 Length = 304 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+DLS++ Sbjct: 49 LGVDLSKI 56>XP_005250983 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+DLS++ Sbjct: 162 LGVDLSKI 169>NP_055132 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIDLSQV 8 G+DLSQ+ Sbjct: 49 GLDLSQI 55>NP_061917 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IDLSQVY 9 +DLS+VY Sbjct: 170 VDLSEVY 176>XP_006712663 Length = 418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IDLSQVY 9 +DLS+VY Sbjct: 226 VDLSEVY 232>XP_006712662 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IDLSQVY 9 +DLS+VY Sbjct: 226 VDLSEVY 232>XP_006712661 Length = 692 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IDLSQVY 9 +DLS+VY Sbjct: 226 VDLSEVY 232>XP_006712660 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IDLSQVY 9 +DLS+VY Sbjct: 226 VDLSEVY 232>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GIDLSQVY 9 G+D+ Q+Y Sbjct: 14156 GLDIQQLY 14163>NP_001020016 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+D+S+V Sbjct: 352 LGVDVSRV 359>NP_001252538 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 541 LDVDLDEVY 549>NP_964012 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+D+S+V Sbjct: 425 LGVDVSRV 432>NP_001036111 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>NP_008865 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+D+S+V Sbjct: 371 LGVDVSRV 378>NP_055780 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 557 LDVDLDEVY 565>NP_001248309 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+D+S+V Sbjct: 356 LGVDVSRV 363>NP_001252537 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>NP_055906 Length = 1720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+DL++V Sbjct: 249 LGLDLTEV 256>NP_001171671 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGIDLSQV 8 LG+ LSQV Sbjct: 116 LGVPLSQV 123>NP_006768 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGIDLSQV 8 LG+ LSQV Sbjct: 116 LGVPLSQV 123>XP_006723004 Length = 6443 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GIDLSQVY 9 G+D+ Q+Y Sbjct: 6092 GLDIQQLY 6099>XP_006720146 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+DL++V Sbjct: 249 LGLDLTEV 256>XP_005267508 Length = 1773 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+DL++V Sbjct: 249 LGLDLTEV 256>XP_005265021 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>XP_006713094 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>XP_006713093 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>XP_005265020 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>XP_006713092 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>XP_005265019 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>XP_006713091 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>XP_005265017 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>XP_005265016 Length = 849 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 511 LDVDLDEVY 519>XP_005265015 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 541 LDVDLDEVY 549>XP_005265014 Length = 895 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 557 LDVDLDEVY 565>XP_005265013 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGIDLSQVY 9 L +DL +VY Sbjct: 615 LDVDLDEVY 623>XP_006712074 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIDLSQV 8 G+D+SQV Sbjct: 80 GVDVSQV 86>XP_005264351 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIDLSQV 8 G+D+SQV Sbjct: 126 GVDVSQV 132>XP_006712072 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIDLSQV 8 G+D+SQV Sbjct: 125 GVDVSQV 131>XP_006712071 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIDLSQV 8 G+D+SQV Sbjct: 126 GVDVSQV 132>XP_006710903 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGIDLSQV 8 LG+D+S+V Sbjct: 425 LGVDVSRV 432>NP_006479 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIDLSQV 8 G+D+SQV Sbjct: 80 GVDVSQV 86>NP_001159450 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGIDLSQV 8 LG D SQV Sbjct: 319 LGADFSQV 326>NP_055178 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IDLSQVY 9 +DLSQ Y Sbjct: 3944 VDLSQCY 3950>NP_653308 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGIDLSQV 8 LG D SQV Sbjct: 319 LGADFSQV 326>NP_001159449 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGIDLSQV 8 LG D SQV Sbjct: 319 LGADFSQV 326>NP_001166104 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGIDLSQV 8 LG+ LSQV Sbjct: 56 LGMQLSQV 63>NP_001166103 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGIDLSQV 8 LG+ LSQV Sbjct: 56 LGMQLSQV 63>NP_002534 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGIDLSQV 8 LG+ LSQV Sbjct: 56 LGMQLSQV 63>NP_001264984 Length = 4432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IDLSQVY 9 +DLSQ Y Sbjct: 3797 VDLSQCY 3803>NP_008985 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IDLSQVY 9 +DLS VY Sbjct: 646 VDLSHVY 652>NP_001269163 Length = 227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DLSQVY 9 D+SQVY Sbjct: 101 DISQVY 106>NP_001269162 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DLSQVY 9 D+SQVY Sbjct: 41 DISQVY 46>NP_001269161 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DLSQVY 9 D+SQVY Sbjct: 41 DISQVY 46>NP_002782 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DLSQVY 9 D+SQVY Sbjct: 120 DISQVY 125>XP_005266395 Length = 4588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IDLSQVY 9 +DLSQ Y Sbjct: 3953 VDLSQCY 3959>XP_006719144 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGIDLSQV 8 LG+ LSQV Sbjct: 56 LGMQLSQV 63>XP_005271926 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IDLSQVY 9 +DLS VY Sbjct: 649 VDLSHVY 655>XP_006714589 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IDLSQVY 9 +DLS VY Sbjct: 673 VDLSHVY 679>XP_005271925 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IDLSQVY 9 +DLS VY Sbjct: 673 VDLSHVY 679>XP_005263937 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGIDLSQV 8 LG D SQV Sbjct: 243 LGADFSQV 250>XP_005263936 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGIDLSQV 8 LG D SQV Sbjct: 319 LGADFSQV 326Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.149 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,965 Number of extensions: 845 Number of successful extensions: 78 Number of sequences better than 10000.0: 78 Number of HSP's gapped: 78 Number of HSP's successfully gapped: 78 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |