Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 509 NP_001035957 20 509 XP_006721991 20 509 XP_006721990 20 509 XP_006721989 20 509 XP_005258041 20 509 XP_006721988 20 509 XP_006721987 20 509 XP_006721986 20 509 XP_005258040 20 509 XP_006721985 20 509 NP_002849 17 4312 XP_005251971 17 4312 XP_005271146 17 4312 XP_006710865 17 4312 XP_005271145 17 4312 NP_001116146 17 4312 NP_995581 17 4312 NP_001230481 16 5631 NP_001273429 16 7355 NP_001018170 16 7355 NP_001018169 16 7355 NP_001006945 16 7355 NP_003933 16 7355 NP_003896 16 7355 NP_060529 16 7355 NP_005119 16 7355 XP_006724131 16 7355 XP_005256272 16 7355 XP_005274438 16 7355 XP_005274437 16 7355 XP_005274436 16 7355 NP_000145 15 9605 NP_001005497 15 9605 NP_054724 15 9605 NP_036417 15 9605 NP_002967 15 9605 NP_073579 15 9605 XP_006716153 15 9605 XP_005250594 15 9605 XP_005250593 15 9605 XP_006716152 15 9605 XP_005250591 15 9605 XP_006715114 15 9605 XP_005249053 15 9605 XP_005249052 15 9605 XP_006715113 15 9605 XP_006712745 15 9605 XP_006712744 15 9605 XP_006712743 15 9605 NP_258441 15 9605 NP_258442 15 9605 NP_036479 15 9605>NP_000258 Length = 2818 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 687 LEVALYMFL 695>NP_001035957 Length = 2839 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 687 LEVALYMFL 695>XP_006721991 Length = 1632 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 697 LEVALYMFL 705>XP_006721990 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 697 LEVALYMFL 705>XP_006721989 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 697 LEVALYMFL 705>XP_005258041 Length = 2836 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 687 LEVALYMFL 695>XP_006721988 Length = 2846 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 697 LEVALYMFL 705>XP_006721987 Length = 2849 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 697 LEVALYMFL 705>XP_006721986 Length = 2854 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 684 LEVALYMFL 692>XP_005258040 Length = 2857 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 687 LEVALYMFL 695>XP_006721985 Length = 2867 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEVVLYMFL 9 LEV LYMFL Sbjct: 697 LEVALYMFL 705>NP_002849 Length = 659 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 L++VLY+F Sbjct: 212 LDIVLYIF 219>XP_005251971 Length = 316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 LEVVL++F Sbjct: 23 LEVVLFVF 30>XP_005271146 Length = 628 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 L++VLY+F Sbjct: 181 LDIVLYIF 188>XP_006710865 Length = 644 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 L++VLY+F Sbjct: 197 LDIVLYIF 204>XP_005271145 Length = 659 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 L++VLY+F Sbjct: 212 LDIVLYIF 219>NP_001116146 Length = 236 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 L++VLY+F Sbjct: 212 LDIVLYIF 219>NP_995581 Length = 316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 LEVVL++F Sbjct: 23 LEVVLFVF 30>NP_001230481 Length = 114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEVVLYMF 8 L VVL+MF Sbjct: 107 LSVVLFMF 114>NP_001273429 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EVVLYMFL 9 E+VLY+ L Sbjct: 425 EIVLYLML 432>NP_001018170 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EVVLYMFL 9 E+VLY+ L Sbjct: 333 EIVLYLML 340>NP_001018169 Length = 528 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EVVLYMFL 9 E+VLY+ L Sbjct: 416 EIVLYLML 423>NP_001006945 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEVVLYMFL 9 L V+LYM L Sbjct: 589 LGVILYMML 597>NP_003933 Length = 772 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEVVLYMFL 9 L V+LYM L Sbjct: 595 LGVILYMML 603>NP_003896 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EVVLYMFL 9 E+VLY+ L Sbjct: 422 EIVLYLML 429>NP_060529 Length = 1075 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 EVVLYMF 8 EVVLY F Sbjct: 561 EVVLYAF 567>NP_005119 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LEVVLYMF 8 LE+VL+ F Sbjct: 247 LEIVLFFF 254>XP_006724131 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LEVVLYMF 8 LE+VL+ F Sbjct: 247 LEIVLFFF 254>XP_005256272 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EVVLYMFL 9 E+VLY+ L Sbjct: 333 EIVLYLML 340>XP_005274438 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEVVLYMFL 9 L V+LYM L Sbjct: 532 LGVILYMML 540>XP_005274437 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEVVLYMFL 9 L V+LYM L Sbjct: 540 LGVILYMML 548>XP_005274436 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEVVLYMFL 9 L V+LYM L Sbjct: 588 LGVILYMML 596>NP_000145 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LEVVLYMFL 9 LEV Y FL Sbjct: 145 LEVATYTFL 153>NP_001005497 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EVVLYMFL 9 +VVL++FL Sbjct: 22 QVVLFIFL 29>NP_054724 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LEVVLYMFL 9 +++VL++FL Sbjct: 824 VQIVLFIFL 832>NP_036417 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVVLYMF 8 EVVL++F Sbjct: 122 EVVLFLF 128>NP_002967 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VVLYMFL 9 +VLY+FL Sbjct: 719 LVLYLFL 725>NP_073579 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LEVVLY 6 LEVVLY Sbjct: 1017 LEVVLY 1022>XP_006716153 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LEVVLY 6 LEVVLY Sbjct: 336 LEVVLY 341>XP_005250594 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LEVVLY 6 LEVVLY Sbjct: 1002 LEVVLY 1007>XP_005250593 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LEVVLY 6 LEVVLY Sbjct: 1055 LEVVLY 1060>XP_006716152 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LEVVLY 6 LEVVLY Sbjct: 1058 LEVVLY 1063>XP_005250591 Length = 1207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LEVVLY 6 LEVVLY Sbjct: 1067 LEVVLY 1072>XP_006715114 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 +EV++Y+F Sbjct: 116 MEVLMYIF 123>XP_005249053 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 +EV++Y+F Sbjct: 149 MEVLMYIF 156>XP_005249052 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 +EV++Y+F Sbjct: 149 MEVLMYIF 156>XP_006715113 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 +EV++Y+F Sbjct: 193 MEVLMYIF 200>XP_006712745 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VVLYMFL 9 +VLY+FL Sbjct: 719 LVLYLFL 725>XP_006712744 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VVLYMFL 9 +VLY+FL Sbjct: 719 LVLYLFL 725>XP_006712743 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VVLYMFL 9 +VLY+FL Sbjct: 719 LVLYLFL 725>NP_258441 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 +EV++Y+F Sbjct: 183 MEVLMYIF 190>NP_258442 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 +EV++Y+F Sbjct: 149 MEVLMYIF 156>NP_036479 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LEVVLYMF 8 +EV++Y+F Sbjct: 193 MEVLMYIF 200Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.350 0.164 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 348,104 Number of extensions: 570 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |