Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055325 18 1135 NP_149015 18 1135 XP_006715989 18 1135 NP_001245210 18 1482 NP_000242 18 1482 XP_005264389 18 1482 NP_001243000 16 5631 XP_005257603 16 5631 XP_006722058 16 5631 XP_005257602 16 5631 NP_001159923 16 7355 NP_000884 16 7355 NP_001161846 16 7355 NP_001161849 16 7355 NP_055624 16 7355 NP_001258468 16 7355 NP_061897 16 7355 NP_001161847 16 7355 XP_006723717 16 7355 XP_006723715 16 7355 XP_006723712 16 7355 XP_006723711 16 7355 XP_006723710 16 7355 XP_006723709 16 7355 XP_006715350 16 7355 XP_006715349 16 7355 XP_005249561 16 7355 XP_005264436 16 7355 XP_006712098 16 7355 XP_006712097 16 7355 NP_000375 15 9605 NP_001136272 15 9605 NP_001008212 15 9605 NP_068815 15 9605 NP_001008214 15 9605 NP_001008213 15 9605 NP_001180211 15 9605 XP_005252395 15 9605 XP_005252394 15 9605 XP_005252393 15 9605 XP_006713948 15 9605>NP_055325 Length = 4935 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LETTSILRS 9 LETT++LRS Sbjct: 2462 LETTAVLRS 2470>NP_149015 Length = 5142 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LETTSILRS 9 LETT++LRS Sbjct: 2462 LETTAVLRS 2470>XP_006715989 Length = 5148 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LETTSILRS 9 LETT++LRS Sbjct: 2462 LETTAVLRS 2470>NP_001245210 Length = 868 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 LET SILRS Sbjct: 664 LETASILRS 672>NP_000242 Length = 934 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 LET SILRS Sbjct: 730 LETASILRS 738>XP_005264389 Length = 921 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 LET SILRS Sbjct: 730 LETASILRS 738>NP_001243000 Length = 5207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 L+TT +LRS Sbjct: 3530 LDTTRLLRS 3538>XP_005257603 Length = 5256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 L+TT +LRS Sbjct: 3579 LDTTRLLRS 3587>XP_006722058 Length = 5256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 L+TT +LRS Sbjct: 3579 LDTTRLLRS 3587>XP_005257602 Length = 5256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 L+TT +LRS Sbjct: 3579 LDTTRLLRS 3587>NP_001159923 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ETTSILRS 9 ETTS LRS Sbjct: 363 ETTSHLRS 370>NP_000884 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ETTSILRS 9 ETTS LRS Sbjct: 399 ETTSHLRS 406>NP_001161846 Length = 1063 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT I+R Sbjct: 31 LETTRIMR 38>NP_001161849 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT I+R Sbjct: 40 LETTRIMR 47>NP_055624 Length = 1072 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT I+R Sbjct: 40 LETTRIMR 47>NP_001258468 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT +LR Sbjct: 523 LETTHLLR 530>NP_061897 Length = 2071 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSILRS 9 TTS+LRS Sbjct: 710 TTSLLRS 716>NP_001161847 Length = 1072 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT I+R Sbjct: 40 LETTRIMR 47>XP_006723717 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT +LR Sbjct: 300 LETTHLLR 307>XP_006723715 Length = 576 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT +LR Sbjct: 523 LETTHLLR 530>XP_006723712 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT +LR Sbjct: 551 LETTHLLR 558>XP_006723711 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT +LR Sbjct: 617 LETTHLLR 624>XP_006723710 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT +LR Sbjct: 636 LETTHLLR 643>XP_006723709 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT +LR Sbjct: 636 LETTHLLR 643>XP_006715350 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT I+R Sbjct: 102 LETTRIMR 109>XP_006715349 Length = 1101 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT I+R Sbjct: 102 LETTRIMR 109>XP_005249561 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 LETT I+R Sbjct: 102 LETTRIMR 109>XP_005264436 Length = 1881 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSILRS 9 TTS+LRS Sbjct: 710 TTSLLRS 716>XP_006712098 Length = 2059 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSILRS 9 TTS+LRS Sbjct: 698 TTSLLRS 704>XP_006712097 Length = 2070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSILRS 9 TTS+LRS Sbjct: 710 TTSLLRS 716>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 L+TT +LR+ Sbjct: 4290 LKTTEVLRN 4298>NP_001136272 Length = 3144 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTSILRS 9 TTS++RS Sbjct: 1424 TTSVIRS 1430>NP_001008212 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 LET +ILR+ Sbjct: 458 LETMTILRA 466>NP_068815 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 LET +ILR+ Sbjct: 458 LETMTILRA 466>NP_001008214 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 LET +ILR+ Sbjct: 458 LETMTILRA 466>NP_001008213 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 LET +ILR+ Sbjct: 458 LETMTILRA 466>NP_001180211 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 L TT+ILR Sbjct: 297 LNTTAILR 304>XP_005252395 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 LET +ILR+ Sbjct: 401 LETMTILRA 409>XP_005252394 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 LET +ILR+ Sbjct: 452 LETMTILRA 460>XP_005252393 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LETTSILRS 9 LET +ILR+ Sbjct: 452 LETMTILRA 460>XP_006713948 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LETTSILR 8 L TT+ILR Sbjct: 298 LNTTAILR 305Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.121 0.272 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 336,273 Number of extensions: 467 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |