Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1935 XP_006718908 18 1935 XP_005271621 18 1935 XP_006718907 18 1935 XP_006718906 18 1935 XP_005271619 18 1935 XP_005271618 18 1935 NP_001129396 18 1935 XP_005252323 17 3301 XP_005252322 17 3301 XP_005252321 17 3301 XP_005252320 17 3301 NP_001092272 17 3301 NP_115547 17 3301 NP_955776 17 4312 NP_001191023 17 4312 NP_002838 17 4312 NP_056202 17 4312 NP_001094289 17 4312 NP_001189414 17 4312 NP_056342 17 4312 XP_006716138 17 4312 NP_570857 17 4312 NP_570858 17 4312 NP_005472 16 5631 XP_006722663 16 5631 XP_005270208 16 5631 XP_005270207 16 5631 XP_005270206 16 5631 NP_077302 16 5631 NP_001258463 16 7355 NP_001380 16 7355 NP_001243757 16 7355 NP_001269255 16 7355 NP_001243756 16 7355 NP_060045 16 7355 NP_001073887 16 7355 XP_006724038 16 7355 XP_005256628 16 7355 XP_005256627 16 7355 XP_006721558 16 7355 XP_006721557 16 7355 XP_006721556 16 7355 XP_005256626 16 7355 XP_005271148 16 7355 NP_612486 15 9605 NP_001013860 15 9605 NP_714544 15 9605 XP_006721205 15 9605 XP_005255864 15 9605 XP_006721204 15 9605 XP_006721203 15 9605 XP_006721202 15 9605 XP_006721201 15 9605 XP_006720470 15 9605 XP_005254235 15 9605 XP_005254233 15 9605 XP_005254234 15 9605>NP_000042 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LELD LALR Sbjct: 2445 LELDELALR 2453>XP_006718908 Length = 1708 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LELD LALR Sbjct: 1097 LELDELALR 1105>XP_005271621 Length = 2708 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LELD LALR Sbjct: 2097 LELDELALR 2105>XP_006718907 Length = 3050 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LELD LALR Sbjct: 2439 LELDELALR 2447>XP_006718906 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LELD LALR Sbjct: 2445 LELDELALR 2453>XP_005271619 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LELD LALR Sbjct: 2445 LELDELALR 2453>XP_005271618 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LELD LALR Sbjct: 2445 LELDELALR 2453>NP_001129396 Length = 1590 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LELDG+ LR Sbjct: 251 LELDGINLR 259>XP_005252323 Length = 635 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LEL+GL LR Sbjct: 38 LELNGLILR 46>XP_005252322 Length = 690 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LEL+GL LR Sbjct: 125 LELNGLILR 133>XP_005252321 Length = 696 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LEL+GL LR Sbjct: 125 LELNGLILR 133>XP_005252320 Length = 706 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LEL+GL LR Sbjct: 125 LELNGLILR 133>NP_001092272 Length = 722 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LEL+GL LR Sbjct: 125 LELNGLILR 133>NP_115547 Length = 706 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LELDGLALR 9 LEL+GL LR Sbjct: 125 LELNGLILR 133>NP_955776 Length = 193 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LELDGLALR 9 LEL+GLA++ Sbjct: 47 LELNGLAVK 55>NP_001191023 Length = 193 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LELDGLALR 9 LEL+GLA++ Sbjct: 47 LELNGLAVK 55>NP_002838 Length = 1015 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LELDGLA 7 LELDG+A Sbjct: 327 LELDGMA 333>NP_056202 Length = 225 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LELDGLALR 9 LEL+GLA++ Sbjct: 79 LELNGLAVK 87>NP_001094289 Length = 204 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LELDGLALR 9 LEL+GLA++ Sbjct: 58 LELNGLAVK 66>NP_001189414 Length = 261 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LELDGLALR 9 LEL+GLA++ Sbjct: 115 LELNGLAVK 123>NP_056342 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ELDGLALR 9 E++GLALR Sbjct: 295 EINGLALR 302>XP_006716138 Length = 858 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LELDGLA 7 LELDG+A Sbjct: 327 LELDGMA 333>NP_570857 Length = 998 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LELDGLA 7 LELDG+A Sbjct: 310 LELDGMA 316>NP_570858 Length = 986 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LELDGLA 7 LELDG+A Sbjct: 327 LELDGMA 333>NP_005472 Length = 877 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LELDGLA 7 L+LDGLA Sbjct: 765 LQLDGLA 771>XP_006722663 Length = 877 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LELDGLA 7 L+LDGLA Sbjct: 765 LQLDGLA 771>XP_005270208 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDGLALR 9 +DGLALR Sbjct: 153 VDGLALR 159>XP_005270207 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDGLALR 9 +DGLALR Sbjct: 153 VDGLALR 159>XP_005270206 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDGLALR 9 +DGLALR Sbjct: 240 VDGLALR 246>NP_077302 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDGLALR 9 +DGLALR Sbjct: 153 VDGLALR 159>NP_001258463 Length = 1994 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LELDGL 6 LELDGL Sbjct: 1150 LELDGL 1155>NP_001380 Length = 2012 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LELDGL 6 LELDGL Sbjct: 1150 LELDGL 1155>NP_001243757 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELDGLA 7 ELDGLA Sbjct: 374 ELDGLA 379>NP_001269255 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELDGLA 7 ELDGLA Sbjct: 193 ELDGLA 198>NP_001243756 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELDGLA 7 ELDGLA Sbjct: 374 ELDGLA 379>NP_060045 Length = 1419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDGLALR 9 +DGLA+R Sbjct: 704 MDGLAIR 710Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELDGLA 7 ELDGLA Sbjct: 1282 ELDGLA 1287>NP_001073887 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LELDGLA 7 LEL+GLA Sbjct: 685 LELEGLA 691>XP_006724038 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LELDGL 6 LELDGL Sbjct: 1045 LELDGL 1050>XP_005256628 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELDGLA 7 ELDGLA Sbjct: 374 ELDGLA 379>XP_005256627 Length = 899 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDGLALR 9 +DGLA+R Sbjct: 704 MDGLAIR 710>XP_006721558 Length = 909 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDGLALR 9 +DGLA+R Sbjct: 704 MDGLAIR 710>XP_006721557 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDGLALR 9 +DGLA+R Sbjct: 704 MDGLAIR 710>XP_006721556 Length = 1357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDGLALR 9 +DGLA+R Sbjct: 704 MDGLAIR 710Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELDGLA 7 ELDGLA Sbjct: 1220 ELDGLA 1225>XP_005256626 Length = 1388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDGLALR 9 +DGLA+R Sbjct: 673 MDGLAIR 679Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELDGLA 7 ELDGLA Sbjct: 1251 ELDGLA 1256>XP_005271148 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LELDGLA 7 LEL+GLA Sbjct: 685 LELEGLA 691>NP_612486 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ELDGLAL 8 EL+GLAL Sbjct: 597 ELNGLAL 603>NP_001013860 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDGLAL 8 LDGLAL Sbjct: 483 LDGLAL 488>NP_714544 Length = 1775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LELDGLAL 8 L+LD LAL Sbjct: 1143 LQLDSLAL 1150>XP_006721205 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDGLAL 8 LDGLAL Sbjct: 483 LDGLAL 488>XP_005255864 Length = 1372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDGLAL 8 LDGLAL Sbjct: 447 LDGLAL 452>XP_006721204 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDGLAL 8 LDGLAL Sbjct: 447 LDGLAL 452>XP_006721203 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDGLAL 8 LDGLAL Sbjct: 483 LDGLAL 488>XP_006721202 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDGLAL 8 LDGLAL Sbjct: 483 LDGLAL 488>XP_006721201 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDGLAL 8 LDGLAL Sbjct: 483 LDGLAL 488>XP_006720470 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LELDGLAL 8 L+LD LAL Sbjct: 385 LQLDSLAL 392>XP_005254235 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ELDGLAL 8 EL+GLAL Sbjct: 598 ELNGLAL 604>XP_005254233 Length = 1228 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ELDGLAL 8 EL+GLAL Sbjct: 598 ELNGLAL 604>XP_005254234 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ELDGLAL 8 EL+GLAL Sbjct: 598 ELNGLAL 604Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.153 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 462,250 Number of extensions: 638 Number of successful extensions: 61 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |