Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1135 XP_005271621 18 1135 XP_006718907 18 1135 XP_006718906 18 1135 XP_005271619 18 1135 XP_005271618 18 1135 NP_671723 16 5631 NP_001268660 16 5631 XP_006719751 16 5631 XP_006719750 16 5631 XP_005269277 16 5631 NP_066997 15 9605 NP_004658 15 9605 NP_067002 15 9605 NP_872630 15 9605 NP_003334 15 9605 NP_001189418 15 9605 NP_714916 15 9605 NP_055640 15 9605 NP_076994 15 9605 NP_061927 15 9605 XP_006720790 15 9605 XP_005268334 15 9605 XP_005268333 15 9605 XP_006720789 15 9605 XP_005254132 15 9605 XP_006717969 15 9605 XP_005269977 15 9605 XP_006717968 15 9605 XP_006717967 15 9605 XP_006717966 15 9605 XP_006717965 15 9605 XP_005245441 15 9605 XP_005245439 15 9605 XP_005245440 15 9605 XP_005245438 15 9605>NP_000042 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 LEKIL+SLT Sbjct: 608 LEKILVSLT 616>XP_005271621 Length = 2708 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 LEKIL+SLT Sbjct: 260 LEKILVSLT 268>XP_006718907 Length = 3050 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 LEKIL+SLT Sbjct: 608 LEKILVSLT 616>XP_006718906 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 LEKIL+SLT Sbjct: 608 LEKILVSLT 616>XP_005271619 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 LEKIL+SLT Sbjct: 608 LEKILVSLT 616>XP_005271618 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 LEKIL+SLT Sbjct: 608 LEKILVSLT 616>NP_671723 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEKILLSLT 9 LEK+ +S+T Sbjct: 92 LEKVFISIT 100>NP_001268660 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEKILLSLT 9 LEK+ +S+T Sbjct: 34 LEKVFISIT 42>XP_006719751 Length = 351 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEKILLSLT 9 LEK+ +S+T Sbjct: 34 LEKVFISIT 42>XP_006719750 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEKILLSLT 9 LEK+ +S+T Sbjct: 92 LEKVFISIT 100>XP_005269277 Length = 409 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEKILLSLT 9 LEK+ +S+T Sbjct: 92 LEKVFISIT 100>NP_066997 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEKILLSL 8 LE+ILL+L Sbjct: 725 LERILLTL 732>NP_004658 Length = 4834 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LEKILLSL 8 L KILLSL Sbjct: 3380 LAKILLSL 3387>NP_067002 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EKILLSLT 9 E +LLSLT Sbjct: 198 EDVLLSLT 205>NP_872630 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEKILLSL 8 +EKILLS+ Sbjct: 88 VEKILLSV 95>NP_003334 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEKILLSL 8 +EKILLS+ Sbjct: 116 VEKILLSV 123>NP_001189418 Length = 95 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEKILLSL 8 +EKILLS+ Sbjct: 46 VEKILLSV 53>NP_714916 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EKILLSLT 9 ++ILLSLT Sbjct: 219 DEILLSLT 226>NP_055640 Length = 2271 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEKILLSL 8 LE+ILL+L Sbjct: 700 LERILLTL 707>NP_076994 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEKILLSLT 9 ++ ILLSLT Sbjct: 214 MDAILLSLT 222>NP_061927 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 +EKILL+++ Sbjct: 753 IEKILLNIS 761>XP_006720790 Length = 4748 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LEKILLSL 8 L KILLSL Sbjct: 3294 LAKILLSL 3301>XP_005268334 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LEKILLSL 8 L KILLSL Sbjct: 3342 LAKILLSL 3349>XP_005268333 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LEKILLSL 8 L KILLSL Sbjct: 3342 LAKILLSL 3349>XP_006720789 Length = 4829 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LEKILLSL 8 L KILLSL Sbjct: 3375 LAKILLSL 3382>XP_005254132 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEKILLSLT 9 ++ ILLSLT Sbjct: 214 MDAILLSLT 222>XP_006717969 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 +EKILL+++ Sbjct: 357 IEKILLNIS 365>XP_005269977 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 +EKILL+++ Sbjct: 473 IEKILLNIS 481>XP_006717968 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 +EKILL+++ Sbjct: 870 IEKILLNIS 878>XP_006717967 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 +EKILL+++ Sbjct: 870 IEKILLNIS 878>XP_006717966 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 +EKILL+++ Sbjct: 870 IEKILLNIS 878>XP_006717965 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LEKILLSLT 9 +EKILL+++ Sbjct: 876 IEKILLNIS 884>XP_005245441 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EKILLSLT 9 E +LLSLT Sbjct: 198 EDVLLSLT 205>XP_005245439 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EKILLSLT 9 E +LLSLT Sbjct: 198 EDVLLSLT 205>XP_005245440 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EKILLSLT 9 E +LLSLT Sbjct: 198 EDVLLSLT 205>XP_005245438 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EKILLSLT 9 E +LLSLT Sbjct: 198 EDVLLSLT 205Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.142 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 419,126 Number of extensions: 702 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |