Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_958441 19 665 NP_958439 19 665 NP_958440 19 665 NP_005219 19 665 NP_001257449 17 2528 NP_055807 17 2528 XP_005267488 17 2528 XP_005267487 17 2528 NP_001010872 17 4312 XP_006715085 17 4312 XP_005245394 17 4312 NP_982258 17 4312 NP_001008895 16 5631 NP_001265442 16 5631 NP_001265443 16 5631 NP_003580 16 5631 NP_001073341 16 5631 NP_001008781 16 5631 NP_003579 16 5631 XP_006724848 16 5631 XP_006724847 16 5631 XP_005262538 16 5631 XP_006718827 16 5631 NP_001165689 16 7355 NP_036368 16 7355 NP_001165691 16 7355 NP_001165690 16 7355 NP_001026864 16 7355 NP_001165692 16 7355 NP_001165693 16 7355 XP_006710533 16 7355 XP_006710532 16 7355 XP_006710531 16 7355 XP_006710530 16 7355 XP_006710529 16 7355 XP_006710528 16 7355 XP_005270696 16 7355 XP_006710527 16 7355 XP_006710526 16 7355 XP_006710525 16 7355 NP_443191 16 7355 NP_113584 15 9605 NP_001264044 15 9605 NP_001243657 15 9605 NP_001243656 15 9605 NP_001243655 15 9605 NP_001243654 15 9605 NP_006581 15 9605 XP_005262029 15 9605 XP_005262028 15 9605 XP_005262026 15 9605 XP_006724637 15 9605 XP_005262025 15 9605 XP_005262024 15 9605 XP_005262023 15 9605 XP_005262022 15 9605 XP_005259796 15 9605 XP_006710290 15 9605 NP_660299 15 9605>NP_958441 Length = 705 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 LEITYV RN Sbjct: 65 LEITYVQRN 73>NP_958439 Length = 628 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 LEITYV RN Sbjct: 65 LEITYVQRN 73>NP_958440 Length = 405 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 LEITYV RN Sbjct: 65 LEITYVQRN 73>NP_005219 Length = 1210 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 LEITYV RN Sbjct: 65 LEITYVQRN 73>NP_001257449 Length = 1068 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EITYVLRN 9 EITY LRN Sbjct: 25 EITYRLRN 32>NP_055807 Length = 1078 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EITYVLRN 9 EITY LRN Sbjct: 25 EITYRLRN 32>XP_005267488 Length = 1078 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EITYVLRN 9 EITY LRN Sbjct: 25 EITYRLRN 32>XP_005267487 Length = 1078 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EITYVLRN 9 EITY LRN Sbjct: 25 EITYRLRN 32>NP_001010872 Length = 1011 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EITYVLRN 9 EI Y+L+N Sbjct: 60 EINYILKN 67>XP_006715085 Length = 1011 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EITYVLRN 9 EI Y+L+N Sbjct: 60 EINYILKN 67>XP_005245394 Length = 1741 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEITYVL 7 LE+TY+L Sbjct: 1705 LEVTYIL 1711>NP_982258 Length = 404 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 L ++YVLRN Sbjct: 34 LLVSYVLRN 42>NP_001008895 Length = 759 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 L+ TYVL+N Sbjct: 156 LDRTYVLQN 164>NP_001265442 Length = 659 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 L+ TYVL+N Sbjct: 56 LDRTYVLQN 64>NP_001265443 Length = 667 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 L+ TYVL+N Sbjct: 56 LDRTYVLQN 64>NP_003580 Length = 659 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 L+ TYVL+N Sbjct: 56 LDRTYVLQN 64>NP_001073341 Length = 895 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 L+ TYVL+N Sbjct: 292 LDRTYVLQN 300>NP_001008781 Length = 4557 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EITYVLRN 9 E+TYVL++ Sbjct: 2118 EVTYVLQD 2125>NP_003579 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 L+ TYVL+N Sbjct: 310 LDRTYVLQN 318>XP_006724848 Length = 900 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 L+ TYVL+N Sbjct: 297 LDRTYVLQN 305>XP_006724847 Length = 902 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 L+ TYVL+N Sbjct: 297 LDRTYVLQN 305>XP_005262538 Length = 915 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEITYVLRN 9 L+ TYVL+N Sbjct: 310 LDRTYVLQN 318>XP_006718827 Length = 3479 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EITYVLRN 9 E+TYVL++ Sbjct: 1008 EVTYVLQD 1015>NP_001165689 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 382 ITYVLR 387>NP_036368 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 396 ITYVLR 401>NP_001165691 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 382 ITYVLR 387>NP_001165690 Length = 648 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 453 ITYVLR 458>NP_001026864 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 443 ITYVLR 448>NP_001165692 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 382 ITYVLR 387>NP_001165693 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 285 ITYVLR 290>XP_006710533 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 453 ITYVLR 458>XP_006710532 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 453 ITYVLR 458>XP_006710531 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 352 ITYVLR 357>XP_006710530 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 352 ITYVLR 357>XP_006710529 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 352 ITYVLR 357>XP_006710528 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 352 ITYVLR 357>XP_005270696 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 382 ITYVLR 387>XP_006710527 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 382 ITYVLR 387>XP_006710526 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 396 ITYVLR 401>XP_006710525 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITYVLR 8 ITYVLR Sbjct: 453 ITYVLR 458>NP_443191 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEITYVLRN 9 L TY+LRN Sbjct: 205 LVATYLLRN 213>NP_113584 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EITYVLR 8 EI Y+LR Sbjct: 1866 EINYILR 1872>NP_001264044 Length = 4516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ITYVLRN 9 +TY LRN Sbjct: 3892 MTYALRN 3898>NP_001243657 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EITYVLR 8 +ITYVL+ Sbjct: 85 DITYVLK 91>NP_001243656 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EITYVLR 8 +ITYVL+ Sbjct: 110 DITYVLK 116>NP_001243655 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EITYVLR 8 +ITYVL+ Sbjct: 188 DITYVLK 194>NP_001243654 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EITYVLR 8 +ITYVL+ Sbjct: 188 DITYVLK 194>NP_006581 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EITYVLR 8 +ITYVL+ Sbjct: 188 DITYVLK 194>XP_005262029 Length = 4240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EITYVLR 8 EI Y+LR Sbjct: 1866 EINYILR 1872>XP_005262028 Length = 4341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EITYVLR 8 EI Y+LR Sbjct: 1866 EINYILR 1872>XP_005262026 Length = 4359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EITYVLR 8 EI Y+LR Sbjct: 1866 EINYILR 1872>XP_006724637 Length = 4365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EITYVLR 8 EI Y+LR Sbjct: 1857 EINYILR 1863>XP_005262025 Length = 4373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EITYVLR 8 EI Y+LR Sbjct: 1866 EINYILR 1872>XP_005262024 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EITYVLR 8 EI Y+LR Sbjct: 1866 EINYILR 1872>XP_005262023 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EITYVLR 8 EI Y+LR Sbjct: 1866 EINYILR 1872>XP_005262022 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EITYVLR 8 EI Y+LR Sbjct: 1866 EINYILR 1872>XP_005259796 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEITYVLRN 9 LE+ VLRN Sbjct: 87 LEVLNVLRN 95>XP_006710290 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITYVLRN 9 IT+V+RN Sbjct: 117 ITFVVRN 123>NP_660299 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEITYVLRN 9 LE+ VLRN Sbjct: 87 LEVLNVLRN 95Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.146 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 393,360 Number of extensions: 520 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |