Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001185761                                                           20     390
NP_001185763                                                           20     390
NP_055459                                                              20     390
NP_001002811                                                           20     390
NP_001002812                                                           20     390
XP_006726410                                                           20     390
XP_006711719                                                           20     390
XP_006711717                                                           20     390
XP_006711716                                                           20     390
XP_006711715                                                           20     390
XP_006711714                                                           20     390
XP_006711713                                                           20     390
XP_006711712                                                           20     390
XP_006711711                                                           20     390
XP_006711710                                                           20     390
XP_006711709                                                           20     390
XP_005277503                                                           20     390
XP_005273038                                                           20     390
XP_006711708                                                           20     390
XP_005277500                                                           20     390
XP_006711707                                                           20     390
XP_005277499                                                           20     390
XP_006711706                                                           20     390
XP_006711705                                                           20     390
XP_006711164                                                           20     390
XP_006710144                                                           20     390
NP_005221                                                              17    2528
XP_006719338                                                           17    2528
NP_001138624                                                           17    3301
NP_689628                                                              17    3301
XP_005273458                                                           17    3301
XP_005273457                                                           17    3301
XP_006716349                                                           17    3301
NP_001033729                                                           17    4312
NP_071378                                                              16    5631
NP_003467                                                              16    5631
NP_060798                                                              16    5631
NP_001243738                                                           16    5631
XP_005260563                                                           16    5631
XP_005260561                                                           16    5631
XP_006718402                                                           16    5631
XP_005263769                                                           16    5631
XP_005263768                                                           16    5631
NP_056142                                                              16    7355
NP_001230133                                                           16    7355
NP_001135936                                                           16    7355
NP_057665                                                              16    7355
NP_001230706                                                           16    7355
NP_001230705                                                           16    7355
NP_072097                                                              16    7355
NP_055494                                                              16    7355
XP_006719009                                                           16    7355
XP_006719008                                                           16    7355
XP_006711311                                                           16    7355
XP_005245106                                                           16    7355
NP_057726                                                              15    9605
NP_000566                                                              15    9605
NP_001035879                                                           15    9605
NP_002702                                                              15    9605
NP_001072990                                                           15    9605
NP_001257943                                                           15    9605
NP_001138882                                                           15    9605
NP_001138880                                                           15    9605
NP_004977                                                              15    9605
XP_006726597                                                           15    9605
XP_005254495                                                           15    9605
XP_006720204                                                           15    9605
XP_006720203                                                           15    9605
XP_006720202                                                           15    9605
XP_006720201                                                           15    9605
XP_006719908                                                           15    9605
XP_006719907                                                           15    9605
XP_006719012                                                           15    9605
XP_005252905                                                           15    9605
XP_005252904                                                           15    9605
XP_005250530                                                           15    9605
XP_006710018                                                           15    9605
NP_036326                                                              15    9605
NP_031389                                                              15    9605
NP_001138881                                                           15    9605
NP_001072989                                                           15    9605
>NP_001185761
          Length = 2240

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 445 VEAAAHESE 453
>NP_001185763
          Length = 2362

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 379 VEAAAHESE 387
>NP_055459
          Length = 2346

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 379 VEAAAHESE 387
>NP_001002811
          Length = 1132

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>NP_001002812
          Length = 969

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 379 VEAAAHESE 387
>XP_006726410
          Length = 2087

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 454 VEAAAHESE 462
>XP_006711719
          Length = 2302

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 445 VEAAAHESE 453
>XP_006711717
          Length = 2385

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 445 VEAAAHESE 453
>XP_006711716
          Length = 2411

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 445 VEAAAHESE 453
>XP_006711715
          Length = 2428

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 379 VEAAAHESE 387
>XP_006711714
          Length = 2429

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 379 VEAAAHESE 387
>XP_006711713
          Length = 2432

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 382 VEAAAHESE 390
>XP_006711712
          Length = 2473

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>XP_006711711
          Length = 2482

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>XP_006711710
          Length = 2494

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 445 VEAAAHESE 453
>XP_006711709
          Length = 2495

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 445 VEAAAHESE 453
>XP_005277503
          Length = 2498

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>XP_005273038
          Length = 2509

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>XP_006711708
          Length = 2512

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>XP_005277500
          Length = 2525

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>XP_006711707
          Length = 2553

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>XP_005277499
          Length = 2561

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>XP_006711706
          Length = 2591

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>XP_006711705
          Length = 2592

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>XP_006711164
          Length = 2087

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 454 VEAAAHESE 462
>XP_006710144
          Length = 564

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           +EAAAHESE
Sbjct: 542 VEAAAHESE 550
>NP_005221
          Length = 407

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LEAAAHESE 9
           LEAA H+S+
Sbjct: 261 LEAACHDSD 269
>XP_006719338
          Length = 407

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LEAAAHESE 9
           LEAA H+S+
Sbjct: 261 LEAACHDSD 269
>NP_001138624
          Length = 372

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LEAAAHESE 9
           L+ AAHE+E
Sbjct: 309 LKVAAHEAE 317
>NP_689628
          Length = 397

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LEAAAHESE 9
           L+ AAHE+E
Sbjct: 334 LKVAAHEAE 342
>XP_005273458
          Length = 307

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LEAAAHESE 9
           L+ AAHE+E
Sbjct: 244 LKVAAHEAE 252
>XP_005273457
          Length = 307

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LEAAAHESE 9
           L+ AAHE+E
Sbjct: 244 LKVAAHEAE 252
>XP_006716349
          Length = 391

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LEAAAHESE 9
           L+ AAHE+E
Sbjct: 328 LKVAAHEAE 336
>NP_001033729
          Length = 693

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   LEAAAHESE 9
           LEAA+H+++
Sbjct: 478 LEAASHQNQ 486
>NP_071378
          Length = 1342

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LEAAAHES 8
            LEAAAH +
Sbjct: 1291 LEAAAHSA 1298
>NP_003467
          Length = 194

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  AAHESE 9
          AAHESE
Sbjct: 50 AAHESE 55
>NP_060798
          Length = 1494

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LEAAAHES 8
            LEAA HE+
Sbjct: 1454 LEAAIHEA 1461
>NP_001243738
          Length = 796

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  AAHESE 9
          AAHESE
Sbjct: 73 AAHESE 78
>XP_005260563
          Length = 1166

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LEAAAHES 8
            LEAAAH +
Sbjct: 1115 LEAAAHSA 1122
>XP_005260561
          Length = 1341

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LEAAAHES 8
            LEAAAH +
Sbjct: 1290 LEAAAHSA 1297
>XP_006718402
          Length = 238

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  AAHESE 9
          AAHESE
Sbjct: 94 AAHESE 99
>XP_005263769
          Length = 1727

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LEAAAHES 8
            LEAA HE+
Sbjct: 1687 LEAAIHEA 1694
>XP_005263768
          Length = 1727

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LEAAAHES 8
            LEAA HE+
Sbjct: 1687 LEAAIHEA 1694
>NP_056142
          Length = 1016

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LEAAAHES 8
           L+AAAH S
Sbjct: 992 LQAAAHAS 999
>NP_001230133
          Length = 296

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  AAAHESE 9
          AAAH SE
Sbjct: 45 AAAHSSE 51
>NP_001135936
          Length = 296

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  AAAHESE 9
          AAAH SE
Sbjct: 45 AAAHSSE 51
>NP_057665
          Length = 431

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  AAAHESE 9
          AAAH SE
Sbjct: 45 AAAHSSE 51
>NP_001230706
          Length = 474

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LEAAAHESE 9
           LEA  HE E
Sbjct: 213 LEAKLHEEE 221
>NP_001230705
          Length = 491

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LEAAAHESE 9
           LEA  HE E
Sbjct: 204 LEAKLHEEE 212
>NP_072097
          Length = 839

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           +EAA HE +
Sbjct: 384 IEAAGHEHQ 392
>NP_055494
          Length = 500

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LEAAAHESE 9
           LEA  HE E
Sbjct: 213 LEAKLHEEE 221
>XP_006719009
          Length = 438

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LEAAAHESE 9
           LEA  HE E
Sbjct: 213 LEAKLHEEE 221
>XP_006719008
          Length = 461

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LEAAAHESE 9
           LEA  HE E
Sbjct: 174 LEAKLHEEE 182
>XP_006711311
          Length = 950

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LEAAAHES 8
           L+AAAH S
Sbjct: 926 LQAAAHAS 933
>XP_005245106
          Length = 970

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LEAAAHES 8
           L+AAAH S
Sbjct: 946 LQAAAHAS 953
>NP_057726
          Length = 3674

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LEAAAHESE 9
           +EAA+H+ E
Sbjct: 542 VEAASHQLE 550
>NP_000566
          Length = 271

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LEAAAHESE 9
           LEA A++SE
Sbjct: 97  LEAIANDSE 105
>NP_001035879
          Length = 523

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           +EAA HE +
Sbjct: 308 MEAARHEHQ 316
>NP_002702
          Length = 1122

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LEAAAHESE 9
            +E A HE+E
Sbjct: 1021 MEEARHENE 1029
>NP_001072990
          Length = 1306

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   AAAHESE 9
           AAAHE E
Sbjct: 663 AAAHELE 669
>NP_001257943
          Length = 1329

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   AAAHESE 9
           AAAHE E
Sbjct: 663 AAAHELE 669
>NP_001138882
          Length = 382

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           +EAA HE +
Sbjct: 211 MEAARHEHQ 219
>NP_001138880
          Length = 471

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           +EAA HE +
Sbjct: 300 MEAARHEHQ 308
>NP_004977
          Length = 1300

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   AAAHESE 9
           AAAHE E
Sbjct: 663 AAAHELE 669
>XP_006726597
          Length = 238

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           L AAAH S+
Sbjct: 118 LAAAAHASQ 126
>XP_005254495
          Length = 3694

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LEAAAHESE 9
           +EAA+H+ E
Sbjct: 562 VEAASHQLE 570
>XP_006720204
          Length = 1298

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   AAAHESE 9
           AAAHE E
Sbjct: 663 AAAHELE 669
>XP_006720203
          Length = 1328

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   AAAHESE 9
           AAAHE E
Sbjct: 663 AAAHELE 669
>XP_006720202
          Length = 1329

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   AAAHESE 9
           AAAHE E
Sbjct: 663 AAAHELE 669
>XP_006720201
          Length = 1357

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   AAAHESE 9
           AAAHE E
Sbjct: 663 AAAHELE 669
>XP_006719908
          Length = 427

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           +EAA HE +
Sbjct: 308 MEAARHEHQ 316
>XP_006719907
          Length = 523

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           +EAA HE +
Sbjct: 308 MEAARHEHQ 316
>XP_006719012
          Length = 238

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           L AAAH S+
Sbjct: 118 LAAAAHASQ 126
>XP_005252905
          Length = 1854

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   EAAAHESE 9
           E A HE+E
Sbjct: 113 ETATHEAE 120
>XP_005252904
          Length = 1855

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   EAAAHESE 9
           E A HE+E
Sbjct: 113 ETATHEAE 120
>XP_005250530
          Length = 921

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           +E A HE+E
Sbjct: 820 MEEARHENE 828
>XP_006710018
          Length = 238

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           L AAAH S+
Sbjct: 118 LAAAAHASQ 126
>NP_036326
          Length = 1849

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   EAAAHESE 9
           E A HE+E
Sbjct: 113 ETATHEAE 120
>NP_031389
          Length = 471

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           +EAA HE +
Sbjct: 300 MEAARHEHQ 308
>NP_001138881
          Length = 471

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LEAAAHESE 9
           +EAA HE +
Sbjct: 300 MEAARHEHQ 308
>NP_001072989
          Length = 1357

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   AAAHESE 9
           AAAHE E
Sbjct: 663 AAAHELE 669
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.288    0.102    0.240 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 585,100
Number of extensions: 870
Number of successful extensions: 81
Number of sequences better than 10000.0: 81
Number of HSP's gapped: 81
Number of HSP's successfully gapped: 81
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (14.9 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package