Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 390 XP_006714104 20 390 XP_005265800 20 390 XP_006714103 20 390 XP_006714102 20 390 NP_055521 18 1935 XP_005269298 18 1935 NP_620279 16 7355 NP_055625 16 7355 NP_001186776 16 7355 NP_001183949 16 7355 NP_065162 16 7355 NP_851994 16 7355 XP_005268297 16 7355 XP_006716309 16 7355 XP_005272429 16 7355 XP_006716125 16 7355 XP_006716124 16 7355 XP_005250564 16 7355 XP_006711734 16 7355 XP_006711733 16 7355 XP_006711732 16 7355 XP_006711731 16 7355 XP_006711730 16 7355 XP_006711729 16 7355 XP_005245695 16 7355 NP_001098 16 7355 NP_940866 16 7355 NP_001110 15 9605 NP_054909 15 9605 NP_001158213 15 9605 NP_054908 15 9605 NP_789771 15 9605 NP_001657 15 9605 NP_997698 15 9605 NP_001597 15 9605 NP_954974 15 9605 NP_001157934 15 9605 XP_003960384 15 9605 XP_006722160 15 9605 XP_006717059 15 9605 XP_003118572 15 9605 XP_006712017 15 9605 XP_003119970 15 9605>NP_006197 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DRSTVEGR 9 DRSTVEGR Sbjct: 480 DRSTVEGR 487>XP_006714104 Length = 832 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DRSTVEGR 9 DRSTVEGR Sbjct: 505 DRSTVEGR 512>XP_005265800 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DRSTVEGR 9 DRSTVEGR Sbjct: 480 DRSTVEGR 487>XP_006714103 Length = 1111 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DRSTVEGR 9 DRSTVEGR Sbjct: 502 DRSTVEGR 509>XP_006714102 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DRSTVEGR 9 DRSTVEGR Sbjct: 505 DRSTVEGR 512>NP_055521 Length = 963 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDRSTVEGR 9 +DR +VEGR Sbjct: 765 MDRKSVEGR 773>XP_005269298 Length = 981 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDRSTVEGR 9 +DR +VEGR Sbjct: 783 MDRKSVEGR 791>NP_620279 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STVEGR 9 STVEGR Sbjct: 259 STVEGR 264>NP_055625 Length = 3117 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRSTVEGR 9 D+S +EGR Sbjct: 2046 DQSDIEGR 2053>NP_001186776 Length = 728 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RSTVEGR 9 RSTV GR Sbjct: 289 RSTVSGR 295>NP_001183949 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DRSTVEGR 9 DRS EGR Sbjct: 55 DRSIFEGR 62>NP_065162 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RSTVEGR 9 RSTV GR Sbjct: 315 RSTVSGR 321>NP_851994 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RSTVEGR 9 RSTV GR Sbjct: 289 RSTVSGR 295>XP_005268297 Length = 129 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRSTVEGR 9 DR TV+G+ Sbjct: 74 DRGTVQGQ 81>XP_006716309 Length = 177 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DRSTVEGR 9 DRS EGR Sbjct: 55 DRSIFEGR 62>XP_005272429 Length = 256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DRSTVEGR 9 DRS EGR Sbjct: 55 DRSIFEGR 62>XP_006716125 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RSTVEGR 9 RSTV GR Sbjct: 293 RSTVSGR 299>XP_006716124 Length = 743 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RSTVEGR 9 RSTV GR Sbjct: 301 RSTVSGR 307>XP_005250564 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RSTVEGR 9 RSTV GR Sbjct: 315 RSTVSGR 321>XP_006711734 Length = 3136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRSTVEGR 9 D+S +EGR Sbjct: 2065 DQSDIEGR 2072>XP_006711733 Length = 3137 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRSTVEGR 9 D+S +EGR Sbjct: 2066 DQSDIEGR 2073>XP_006711732 Length = 3154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRSTVEGR 9 D+S +EGR Sbjct: 2083 DQSDIEGR 2090>XP_006711731 Length = 3157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRSTVEGR 9 D+S +EGR Sbjct: 2086 DQSDIEGR 2093>XP_006711730 Length = 3157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRSTVEGR 9 D+S +EGR Sbjct: 2086 DQSDIEGR 2093>XP_006711729 Length = 3158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRSTVEGR 9 D+S +EGR Sbjct: 2087 DQSDIEGR 2094>XP_005245695 Length = 3158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRSTVEGR 9 D+S +EGR Sbjct: 2087 DQSDIEGR 2094>NP_001098 Length = 99 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DRSTVEGR 9 DR TV+G+ Sbjct: 44 DRGTVQGQ 51>NP_940866 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DRSTVEGR 9 DRS EGR Sbjct: 55 DRSIFEGR 62>NP_001110 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDRSTVEG 8 +DRS V+G Sbjct: 529 MDRSLVQG 536>NP_054909 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDRSTVEG 8 +DRS V+G Sbjct: 529 MDRSLVQG 536>NP_001158213 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LDRSTVE 7 LDR T+E Sbjct: 409 LDRQTIE 415>NP_054908 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDRSTVEG 8 +DRS V+G Sbjct: 560 MDRSLVQG 567>NP_789771 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDRSTVEG 8 +DRS V+G Sbjct: 560 MDRSLVQG 567>NP_001657 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LDRSTVE 7 LDR T+E Sbjct: 369 LDRQTIE 375>NP_997698 Length = 2466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDRSTV 6 LDRSTV Sbjct: 172 LDRSTV 177>NP_001597 Length = 2436 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDRSTV 6 LDRSTV Sbjct: 142 LDRSTV 147>NP_954974 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RSTVEGR 9 RST++GR Sbjct: 754 RSTLQGR 760>NP_001157934 Length = 5335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DRSTVEGR 9 D ST+ GR Sbjct: 426 DSSTISGR 433>XP_003960384 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDRSTVEGR 9 L RST +GR Sbjct: 481 LQRSTDQGR 489>XP_006722160 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDRSTVEGR 9 L+ STV GR Sbjct: 664 LELSTVRGR 672>XP_006717059 Length = 2435 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDRSTV 6 LDRSTV Sbjct: 141 LDRSTV 146>XP_003118572 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDRSTVEGR 9 L RST +GR Sbjct: 481 LQRSTDQGR 489>XP_006712017 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RSTVEGR 9 RST++GR Sbjct: 763 RSTLQGR 769>XP_003119970 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDRSTVEGR 9 L RST +GR Sbjct: 481 LQRSTDQGR 489Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.133 0.347 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 503,832 Number of extensions: 905 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |