Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 19 869 NP_009297 19 869 NP_115829 17 2528 XP_005259388 17 2528 XP_005259387 17 2528 XP_005259386 17 2528 XP_005259385 17 2528 NP_114368 16 5631 NP_002810 16 5631 NP_114367 16 5631 NP_001157262 16 5631 NP_005147 16 5631 NP_001231827 16 5631 NP_001231825 16 5631 NP_001103132 16 5631 NP_065104 16 5631 NP_001157260 16 5631 NP_001231826 16 5631 XP_005259655 16 5631 XP_005259654 16 5631 XP_005254620 16 5631 XP_005252381 16 5631 XP_006717409 16 5631 XP_006717408 16 5631 XP_006717407 16 5631 XP_006717406 16 5631 XP_006715707 16 5631 XP_005249672 16 5631 XP_006715706 16 5631 XP_006715705 16 5631 XP_005249670 16 5631 NP_612454 16 5631 NP_001230913 16 7355 NP_068810 16 7355 NP_001138610 16 7355 NP_001230914 16 7355 NP_919416 16 7355 NP_003372 16 7355 NP_055640 16 7355 NP_067013 16 7355 NP_066022 16 7355 XP_006723369 16 7355 XP_005267192 16 7355 XP_006715625 16 7355 XP_005271143 16 7355 XP_005271142 16 7355 XP_005271141 16 7355 NP_001243398 15 9605 NP_036462 15 9605 NP_001243397 15 9605 NP_619542 15 9605 NP_001186084 15 9605 NP_001186085 15 9605 NP_001186087 15 9605 NP_001186086 15 9605 NP_008998 15 9605 NP_001092882 15 9605 NP_006757 15 9605 NP_001092883 15 9605 XP_005274600 15 9605 XP_005269721 15 9605 XP_005273706 15 9605>NP_005148 Length = 1130 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DFSKLLSS 9 DFSKLLSS Sbjct: 1113 DFSKLLSS 1120>NP_009297 Length = 1149 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DFSKLLSS 9 DFSKLLSS Sbjct: 1132 DFSKLLSS 1139>NP_115829 Length = 609 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLLS Sbjct: 250 DFSKLLS 256>XP_005259388 Length = 545 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLLS Sbjct: 186 DFSKLLS 192>XP_005259387 Length = 548 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLLS Sbjct: 189 DFSKLLS 195>XP_005259386 Length = 577 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLLS Sbjct: 218 DFSKLLS 224>XP_005259385 Length = 577 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLLS Sbjct: 218 DFSKLLS 224>NP_114368 Length = 531 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 255 IDFSKLTS 262>NP_002810 Length = 557 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 255 IDFSKLTS 262>NP_114367 Length = 550 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 255 IDFSKLTS 262>NP_001157262 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 256 IDFSKLTS 263>NP_005147 Length = 552 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 253 IDFSKLTS 260>NP_001231827 Length = 558 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 259 IDFSKLTS 266>NP_001231825 Length = 457 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 158 IDFSKLTS 165>NP_001103132 Length = 4284 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DFSKLLSS 9 DF KLLS+ Sbjct: 720 DFQKLLST 727>NP_065104 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DFSKLLSS 9 DFS LLSS Sbjct: 140 DFSVLLSS 147>NP_001157260 Length = 524 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 225 IDFSKLTS 232>NP_001231826 Length = 547 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 225 IDFSKLTS 232>XP_005259655 Length = 533 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 257 IDFSKLTS 264>XP_005259654 Length = 559 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 257 IDFSKLTS 264>XP_005254620 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DFSKLLSS 9 DFS LLSS Sbjct: 59 DFSVLLSS 66>XP_005252381 Length = 452 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 153 IDFSKLTS 160>XP_006717409 Length = 521 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 222 IDFSKLTS 229>XP_006717408 Length = 524 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 225 IDFSKLTS 232>XP_006717407 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 256 IDFSKLTS 263>XP_006717406 Length = 558 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFSKL S Sbjct: 259 IDFSKLTS 266>XP_006715707 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLL+ Sbjct: 279 DFSKLLA 285>XP_005249672 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLL+ Sbjct: 279 DFSKLLA 285>XP_006715706 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLL+ Sbjct: 279 DFSKLLA 285>XP_006715705 Length = 351 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLL+ Sbjct: 297 DFSKLLA 303>XP_005249670 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLL+ Sbjct: 491 DFSKLLA 497>NP_612454 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 DFSKLL+ Sbjct: 279 DFSKLLA 285>NP_001230913 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 471 MDFSALLS 478>NP_068810 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 540 MDFSALLS 547>NP_001138610 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 537 MDFSALLS 544>NP_001230914 Length = 448 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 437 MDFSALLS 444>NP_919416 Length = 169 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DFSKLL 7 DFSKLL Sbjct: 89 DFSKLL 94>NP_003372 Length = 170 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DFSKLL 7 DFSKLL Sbjct: 89 DFSKLL 94>NP_055640 Length = 2271 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DFSKLL 7 DFSKLL Sbjct: 579 DFSKLL 584>NP_067013 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDFSKLLS 8 +DFSKL++ Sbjct: 252 IDFSKLVN 259>NP_066022 Length = 2564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDFSKLLSS 9 +DFSKL S Sbjct: 227 VDFSKLTKS 235>XP_006723369 Length = 2394 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDFSKLLSS 9 +DFSKL S Sbjct: 227 VDFSKLTKS 235>XP_005267192 Length = 168 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DFSKLL 7 DFSKLL Sbjct: 89 DFSKLL 94>XP_006715625 Length = 169 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DFSKLL 7 DFSKLL Sbjct: 89 DFSKLL 94>XP_005271143 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDFSKLLS 8 +DFSKL++ Sbjct: 252 IDFSKLVN 259>XP_005271142 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDFSKLLS 8 +DFSKL++ Sbjct: 252 IDFSKLVN 259>XP_005271141 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDFSKLLS 8 +DFSKL++ Sbjct: 252 IDFSKLVN 259>NP_001243398 Length = 1781 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 582 IDFSYLLS 589>NP_036462 Length = 2073 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 874 IDFSYLLS 881>NP_001243397 Length = 1890 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 691 IDFSYLLS 698>NP_619542 Length = 1041 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 +FSKLLS Sbjct: 362 NFSKLLS 368>NP_001186084 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 461 IDFSYLLS 468>NP_001186085 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 352 IDFSYLLS 359>NP_001186087 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 322 IDFSYLLS 329>NP_001186086 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 381 IDFSYLLS 388>NP_008998 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 491 IDFSYLLS 498>NP_001092882 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 663 IDFSYLLS 670>NP_006757 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 663 IDFSYLLS 670>NP_001092883 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 663 IDFSYLLS 670>XP_005274600 Length = 1059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DFSKLLS 8 +FSKLLS Sbjct: 380 NFSKLLS 386>XP_005269721 Length = 2073 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 874 IDFSYLLS 881>XP_005273706 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDFSKLLS 8 +DFS LLS Sbjct: 656 IDFSYLLS 663Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.132 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 397,589 Number of extensions: 601 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |