Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 20 390 NP_000240 20 390 XP_005265218 20 390 NP_056999 20 509 NP_853629 20 509 NP_001121185 20 509 NP_001061 18 1935 NP_056445 18 1935 XP_005257280 18 1935 XP_005257279 18 1935 XP_006712474 18 1935 NP_057521 18 1935 XP_005264070 17 3301 NP_789795 17 3301 NP_001047 17 3301 NP_005844 17 4312 NP_001239126 17 4312 NP_001123537 16 5631 NP_055746 16 5631 NP_004136 16 5631 XP_005258727 16 5631 XP_005258726 16 5631 XP_006722820 16 5631 XP_005259972 16 5631 XP_006722819 16 5631 XP_006722818 16 5631 NP_055558 16 7355 NP_001094060 16 7355 XP_005248098 16 7355 XP_006713998 16 7355 XP_006713997 16 7355 NP_000979 16 7355 NP_001077430 15 9605 NP_525128 15 9605 NP_775907 15 9605 NP_612355 15 9605 NP_001164100 15 9605 NP_001554 15 9605 NP_001269297 15 9605 NP_065971 15 9605 NP_001241657 15 9605 NP_001241658 15 9605 NP_055592 15 9605 NP_001121598 15 9605 NP_055073 15 9605 NP_001180438 15 9605 NP_002724 15 9605 NP_060205 15 9605 NP_001193639 15 9605 XP_006726657 15 9605 XP_006725285 15 9605 XP_006723744 15 9605 XP_005260304 15 9605 XP_005258866 15 9605 XP_005269077 15 9605 XP_006719563 15 9605 XP_006719562 15 9605 XP_005269076 15 9605 XP_005253197 15 9605 XP_005264473 15 9605 XP_005273417 15 9605 XP_005263588 15 9605 NP_001193638 15 9605 NP_001035792 15 9605 NP_065954 15 9605>NP_001245200 Length = 687 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDETVLNRI 9 LDETV+NRI Sbjct: 11 LDETVVNRI 19>NP_000240 Length = 756 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDETVLNRI 9 LDETV+NRI Sbjct: 11 LDETVVNRI 19>XP_005265218 Length = 687 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDETVLNRI 9 LDETV+NRI Sbjct: 11 LDETVVNRI 19>NP_056999 Length = 558 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDETVLNRI 9 LDET LNRI Sbjct: 48 LDETALNRI 56>NP_853629 Length = 553 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDETVLNRI 9 LDET LNRI Sbjct: 48 LDETALNRI 56>NP_001121185 Length = 553 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDETVLNRI 9 LDET LNRI Sbjct: 48 LDETALNRI 56>NP_001061 Length = 451 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LDETVLNRI 9 LD T LNRI Sbjct: 205 LDNTALNRI 213>NP_056445 Length = 807 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DETVLNRI 9 DET+LNR+ Sbjct: 121 DETLLNRL 128>XP_005257280 Length = 298 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LDETVLNRI 9 LD T LNRI Sbjct: 52 LDNTALNRI 60>XP_005257279 Length = 460 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LDETVLNRI 9 LD T LNRI Sbjct: 214 LDNTALNRI 222>XP_006712474 Length = 689 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DETVLNRI 9 DET+LNR+ Sbjct: 5 DETLLNRL 12>NP_057521 Length = 451 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LDETVLNRI 9 LD T LNRI Sbjct: 205 LDNTALNRI 213>XP_005264070 Length = 298 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LDETVLNRI 9 +DETVL++I Sbjct: 218 VDETVLDKI 226>NP_789795 Length = 307 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LDETVLNRI 9 +DETVL++I Sbjct: 227 VDETVLDKI 235>NP_001047 Length = 296 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LDETVLNRI 9 +DETVL++I Sbjct: 216 VDETVLDKI 224>NP_005844 Length = 483 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LDETVLNR 8 L++TVLNR Sbjct: 442 LNQTVLNR 449>NP_001239126 Length = 482 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LDETVLNR 8 L++TVLNR Sbjct: 441 LNQTVLNR 448>NP_001123537 Length = 2022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDETVLNRI 9 LDE +LN+I Sbjct: 1514 LDEFLLNKI 1522>NP_055746 Length = 881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DETVLNRI 9 DE++LNR+ Sbjct: 99 DESLLNRL 106>NP_004136 Length = 2157 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDETVLNRI 9 LDE +LN+I Sbjct: 1514 LDEFLLNKI 1522>XP_005258727 Length = 881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DETVLNRI 9 DE++LNR+ Sbjct: 99 DESLLNRL 106>XP_005258726 Length = 881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DETVLNRI 9 DE++LNR+ Sbjct: 99 DESLLNRL 106>XP_006722820 Length = 2140 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDETVLNRI 9 LDE +LN+I Sbjct: 1514 LDEFLLNKI 1522>XP_005259972 Length = 2141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDETVLNRI 9 LDE +LN+I Sbjct: 1514 LDEFLLNKI 1522>XP_006722819 Length = 2156 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDETVLNRI 9 LDE +LN+I Sbjct: 1514 LDEFLLNKI 1522>XP_006722818 Length = 2157 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDETVLNRI 9 LDE +LN+I Sbjct: 1514 LDEFLLNKI 1522>NP_055558 Length = 1395 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDETVLN 7 LD TVLN Sbjct: 618 LDSTVLN 624>NP_001094060 Length = 1395 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDETVLN 7 LD TVLN Sbjct: 618 LDSTVLN 624>XP_005248098 Length = 1310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDETVLN 7 LD TVLN Sbjct: 509 LDSTVLN 515>XP_006713998 Length = 1332 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDETVLN 7 LD TVLN Sbjct: 618 LDSTVLN 624>XP_006713997 Length = 1419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDETVLN 7 LD TVLN Sbjct: 618 LDSTVLN 624>NP_000979 Length = 136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDETVLNR 8 LD+TV+N+ Sbjct: 91 LDKTVVNK 98>NP_001077430 Length = 1523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETVLNRI 9 +ETV NR+ Sbjct: 53 EETVQNRV 60>NP_525128 Length = 72 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DETVLNR 8 DE++LNR Sbjct: 63 DESLLNR 69>NP_775907 Length = 1518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETVLNRI 9 +ETV NR+ Sbjct: 53 EETVQNRV 60>NP_612355 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDETVL 6 LDETVL Sbjct: 281 LDETVL 286>NP_001164100 Length = 2581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETVLNRI 9 ETV NR+ Sbjct: 2399 ETVFNRV 2405>NP_001554 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETVLNRI 9 D+T+LN I Sbjct: 202 DDTLLNEI 209>NP_001269297 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETVLNRI 9 D+T+LN I Sbjct: 124 DDTLLNEI 131>NP_065971 Length = 2302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETVLNRI 9 ETV NR+ Sbjct: 2120 ETVFNRV 2126>NP_001241657 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDETVLN 7 LDE VLN Sbjct: 114 LDEMVLN 120>NP_001241658 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDETVLN 7 LDE VLN Sbjct: 114 LDEMVLN 120>NP_055592 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETVLNRI 9 +TVLNR+ Sbjct: 279 DTVLNRL 285>NP_001121598 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDETVLN 7 LDE VLN Sbjct: 114 LDEMVLN 120>NP_055073 Length = 1530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DETVLNRI 9 DE VLN I Sbjct: 119 DEAVLNMI 126>NP_001180438 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETVLNRI 9 D+T+LN I Sbjct: 269 DDTILNDI 276>NP_002724 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETVLNRI 9 ET++NR+ Sbjct: 286 ETIINRL 292>NP_060205 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETVLNRI 9 D+T+LN I Sbjct: 319 DDTILNDI 326>NP_001193639 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETVLNRI 9 ET++NR+ Sbjct: 254 ETIINRL 260>XP_006726657 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDETVL 6 LDETVL Sbjct: 281 LDETVL 286>XP_006725285 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDETVL 6 LDETVL Sbjct: 281 LDETVL 286>XP_006723744 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DETVLNRI 9 DE VLN I Sbjct: 119 DEAVLNMI 126>XP_005260304 Length = 1530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DETVLNRI 9 DE VLN I Sbjct: 119 DEAVLNMI 126>XP_005258866 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETVLNRI 9 +ETV NR+ Sbjct: 53 EETVQNRV 60>XP_005269077 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETVLNRI 9 ET++NR+ Sbjct: 202 ETIINRL 208>XP_006719563 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETVLNRI 9 ET++NR+ Sbjct: 235 ETIINRL 241>XP_006719562 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETVLNRI 9 ET++NR+ Sbjct: 254 ETIINRL 260>XP_005269076 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETVLNRI 9 ET++NR+ Sbjct: 323 ETIINRL 329>XP_005253197 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DETVLNR 8 DET LNR Sbjct: 699 DETNLNR 705>XP_005264473 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETVLNRI 9 D+T+LN I Sbjct: 319 DDTILNDI 326>XP_005273417 Length = 1487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETVLNRI 9 +TVLNR+ Sbjct: 279 DTVLNRL 285>XP_005263588 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDETVL 6 LDETVL Sbjct: 281 LDETVL 286>NP_001193638 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETVLNRI 9 ET++NR+ Sbjct: 295 ETIINRL 301>NP_001035792 Length = 72 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DETVLNR 8 DE++LNR Sbjct: 63 DESLLNR 69>NP_065954 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDETVL 6 LDETVL Sbjct: 238 LDETVL 243Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.143 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,915 Number of extensions: 820 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |