Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036566 17 3301 NP_116023 17 3301 XP_005251676 17 3301 XP_005248768 17 3301 XP_006715522 17 3301 XP_005248767 17 3301 NP_079524 17 4312 XP_006725425 17 4312 XP_006725424 17 4312 XP_006725423 17 4312 XP_006725422 17 4312 XP_006725421 17 4312 XP_006725420 17 4312 XP_006725419 17 4312 XP_006722186 17 4312 XP_006722185 17 4312 XP_006722184 17 4312 XP_006722183 17 4312 XP_006722182 17 4312 XP_006722181 17 4312 XP_006722180 17 4312 NP_002589 16 5631 NP_001186390 16 5631 NP_659005 16 5631 XP_006715561 16 5631 NP_001269676 16 7355 NP_001269674 16 7355 NP_775104 16 7355 NP_055417 16 7355 XP_005257794 16 7355 XP_005252438 16 7355 XP_005252437 16 7355 NP_115752 16 7355 NP_005070 15 9605 NP_001274071 15 9605 NP_001020423 15 9605 NP_001020424 15 9605 NP_001274072 15 9605 NP_001274069 15 9605 NP_056011 15 9605 NP_001124479 15 9605 NP_036205 15 9605 NP_443106 15 9605 XP_005262928 15 9605 XP_005262927 15 9605 XP_005262926 15 9605 NP_073754 15 9605>NP_036566 Length = 495 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LASKVGGRI 9 +ASK+GG++ Sbjct: 129 VASKIGGKM 137>NP_116023 Length = 1089 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LASKVGGR 8 LAS VGGR Sbjct: 657 LASMVGGR 664>XP_005251676 Length = 1089 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LASKVGGR 8 LAS VGGR Sbjct: 657 LASMVGGR 664>XP_005248768 Length = 429 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LASKVGGRI 9 +ASK+GG++ Sbjct: 63 VASKIGGKM 71>XP_006715522 Length = 442 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LASKVGGRI 9 +ASK+GG++ Sbjct: 129 VASKIGGKM 137>XP_005248767 Length = 478 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LASKVGGRI 9 +ASK+GG++ Sbjct: 112 VASKIGGKM 120>NP_079524 Length = 1183 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 380 LASKAGGMV 388>XP_006725425 Length = 1035 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 234 LASKAGGMV 242>XP_006725424 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 234 LASKAGGMV 242>XP_006725423 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 234 LASKAGGMV 242>XP_006725422 Length = 1091 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 331 LASKAGGMV 339>XP_006725421 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 331 LASKAGGMV 339>XP_006725420 Length = 1134 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 290 LASKAGGMV 298>XP_006725419 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 331 LASKAGGMV 339>XP_006722186 Length = 1035 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 234 LASKAGGMV 242>XP_006722185 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 234 LASKAGGMV 242>XP_006722184 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 234 LASKAGGMV 242>XP_006722183 Length = 1091 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 331 LASKAGGMV 339>XP_006722182 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 331 LASKAGGMV 339>XP_006722181 Length = 1134 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 290 LASKAGGMV 298>XP_006722180 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LASK GG + Sbjct: 331 LASKAGGMV 339>NP_002589 Length = 344 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKVGGR 8 SKVGGR Sbjct: 29 SKVGGR 34>NP_001186390 Length = 221 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKVGGR 8 SKVGGR Sbjct: 29 SKVGGR 34>NP_659005 Length = 228 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKVGGR 8 SKVGGR Sbjct: 29 SKVGGR 34>XP_006715561 Length = 298 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKVGGR 8 SKVGGR Sbjct: 29 SKVGGR 34>NP_001269676 Length = 609 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LASKVGGRI 9 +A K+GG+I Sbjct: 488 VAEKMGGKI 496>NP_001269674 Length = 865 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LASKVGGRI 9 +A K+GG+I Sbjct: 744 VAEKMGGKI 752>NP_775104 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LASKVGGRI 9 +A K+GG+I Sbjct: 751 VAEKMGGKI 759>NP_055417 Length = 1358 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SKVGGRI 9 S++GGR+ Sbjct: 1039 SRIGGRV 1045>XP_005257794 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LASKVGGR 8 +ASK+G R Sbjct: 1 MASKIGSR 8>XP_005252438 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LASKVGGRI 9 +A K+GG+I Sbjct: 663 VAEKMGGKI 671>XP_005252437 Length = 807 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LASKVGGRI 9 +A K+GG+I Sbjct: 686 VAEKMGGKI 694>NP_115752 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LASKVGGR 8 +ASK+G R Sbjct: 1 MASKIGSR 8>NP_005070 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LASKVGG 7 L SKVGG Sbjct: 144 LKSKVGG 150>NP_001274071 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LASKVGG 7 L SKVGG Sbjct: 198 LKSKVGG 204>NP_001020423 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LASKVGG 7 L SKVGG Sbjct: 184 LKSKVGG 190>NP_001020424 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LASKVGG 7 L SKVGG Sbjct: 167 LKSKVGG 173>NP_001274072 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LASKVGG 7 L SKVGG Sbjct: 193 LKSKVGG 199>NP_001274069 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LASKVGG 7 L SKVGG Sbjct: 207 LKSKVGG 213>NP_056011 Length = 1609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVGGRI 9 KVGGR+ Sbjct: 728 KVGGRL 733>NP_001124479 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVGGRI 9 KVGGR+ Sbjct: 729 KVGGRL 734>NP_036205 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVGGRI 9 KVGGR+ Sbjct: 214 KVGGRL 219>NP_443106 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 LAS +GG + Sbjct: 278 LASSIGGTL 286>XP_005262928 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVGGRI 9 KVGGR+ Sbjct: 84 KVGGRL 89>XP_005262927 Length = 1526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVGGRI 9 KVGGR+ Sbjct: 645 KVGGRL 650>XP_005262926 Length = 1609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVGGRI 9 KVGGR+ Sbjct: 729 KVGGRL 734>NP_073754 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LASKVGGRI 9 L SK+GG + Sbjct: 382 LFSKIGGSV 390Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.142 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 458,829 Number of extensions: 595 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |