Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 20 299 NP_005913 20 299 XP_005267046 20 299 XP_005267045 20 299 NP_689777 18 1935 NP_060360 18 1935 XP_006726456 18 1935 XP_005250858 18 1935 XP_005250857 18 1935 XP_006712229 18 1935 XP_006712226 18 1935 NP_065706 16 5631 XP_006726454 16 5631 XP_005258608 16 5631 XP_006721300 16 5631 XP_006712228 16 5631 XP_006710178 16 5631 NP_659493 16 5631 NP_008977 16 7355 NP_061170 16 7355 NP_060639 16 7355 XP_006719162 16 7355 XP_005253462 16 7355 XP_005272088 16 7355 XP_006711991 16 7355 NP_060592 15 9605 NP_055888 15 9605 NP_001274141 15 9605 NP_005874 15 9605 NP_060206 15 9605 NP_065867 15 9605 NP_001116291 15 9605 NP_057118 15 9605 XP_006723175 15 9605 XP_005258729 15 9605 XP_005258728 15 9605 XP_006722673 15 9605 XP_006722672 15 9605 XP_006722671 15 9605 XP_006722670 15 9605 XP_005259532 15 9605 XP_005255481 15 9605 XP_005255479 15 9605 XP_006717199 15 9605 XP_006712350 15 9605 XP_006711490 15 9605 XP_006711489 15 9605 XP_005246008 15 9605 XP_005246007 15 9605 NP_848606 15 9605>NP_006715 Length = 1558 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LARPARQTS 9 +ARPARQTS Sbjct: 206 IARPARQTS 214>NP_005913 Length = 1608 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LARPARQTS 9 +ARPARQTS Sbjct: 206 IARPARQTS 214>XP_005267046 Length = 1554 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LARPARQTS 9 +ARPARQTS Sbjct: 206 IARPARQTS 214>XP_005267045 Length = 1604 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LARPARQTS 9 +ARPARQTS Sbjct: 206 IARPARQTS 214>NP_689777 Length = 3997 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LARPARQTS 9 +ARP+RQ+S Sbjct: 1794 IARPSRQSS 1802>NP_060360 Length = 4022 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LARPARQTS 9 +ARP+RQ+S Sbjct: 1819 IARPSRQSS 1827>XP_006726456 Length = 191 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LARPARQTS 9 LA+PARQ S Sbjct: 134 LAKPARQPS 142Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARPARQTS 9 A+PARQ S Sbjct: 161 AKPARQPS 168>XP_005250858 Length = 4022 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LARPARQTS 9 +ARP+RQ+S Sbjct: 1819 IARPSRQSS 1827>XP_005250857 Length = 4022 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LARPARQTS 9 +ARP+RQ+S Sbjct: 1819 IARPSRQSS 1827>XP_006712229 Length = 752 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LARPARQTS 9 LA+PARQ S Sbjct: 553 LAKPARQPS 561Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARPARQTS 9 A+PARQ S Sbjct: 337 AKPARQPS 344>XP_006712226 Length = 590 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LARPARQTS 9 LA+PARQ S Sbjct: 542 LAKPARQPS 550Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARPARQTS 9 A+PARQ S Sbjct: 255 AKPARQPS 262>NP_065706 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RPARQTS 9 RP RQTS Sbjct: 434 RPKRQTS 440>XP_006726454 Length = 280 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARPARQTS 9 A+PARQ S Sbjct: 133 AKPARQPS 140Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARPARQTS 9 A+PARQ S Sbjct: 201 AKPARQPS 208>XP_005258608 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARPARQTS 9 ARPAR+ S Sbjct: 74 ARPAREPS 81>XP_006721300 Length = 611 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RPARQTS 9 RP RQTS Sbjct: 297 RPKRQTS 303>XP_006712228 Length = 202 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARPARQTS 9 A+PARQ S Sbjct: 69 AKPARQPS 76>XP_006710178 Length = 307 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARPARQTS 9 A+PA QTS Sbjct: 29 AKPASQTS 36>NP_659493 Length = 629 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARPARQTS 9 ARPAR+ S Sbjct: 299 ARPAREPS 306>NP_008977 Length = 1016 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LARPAR 6 LARPAR Sbjct: 147 LARPAR 152>NP_061170 Length = 728 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RPARQTS 9 RPA QTS Sbjct: 386 RPAAQTS 392>NP_060639 Length = 1747 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LARPARQTS 9 L P+RQTS Sbjct: 254 LTLPSRQTS 262>XP_006719162 Length = 1676 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LARPARQTS 9 L P+RQTS Sbjct: 254 LTLPSRQTS 262>XP_005253462 Length = 1747 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LARPARQTS 9 L P+RQTS Sbjct: 254 LTLPSRQTS 262>XP_005272088 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RPARQTS 9 RPA QTS Sbjct: 374 RPAAQTS 380>XP_006711991 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LARPAR 6 LARPAR Sbjct: 147 LARPAR 152>NP_060592 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LARPARQTS 9 L+RP R+T+ Sbjct: 14 LSRPIRRTT 22>NP_055888 Length = 1781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LARPARQT 8 L+RP +QT Sbjct: 1110 LSRPLKQT 1117>NP_001274141 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 +PAR+TS Sbjct: 816 KPARKTS 822>NP_005874 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 RPAR+T+ Sbjct: 2071 RPARRTT 2077>NP_060206 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LARPARQTS 9 +A PA+QT+ Sbjct: 1 MAAPAQQTT 9>NP_065867 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 +PAR+TS Sbjct: 916 KPARKTS 922>NP_001116291 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 +PAR+TS Sbjct: 915 KPARKTS 921>NP_057118 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ARPARQT 8 ARP+R+T Sbjct: 34 ARPSRRT 40>XP_006723175 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LARPARQT 8 L+RP +QT Sbjct: 423 LSRPLKQT 430>XP_005258729 Length = 1780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LARPARQT 8 L+RP +QT Sbjct: 1110 LSRPLKQT 1117>XP_005258728 Length = 1781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LARPARQT 8 L+RP +QT Sbjct: 1110 LSRPLKQT 1117>XP_006722673 Length = 2302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 RPAR+T+ Sbjct: 2070 RPARRTT 2076>XP_006722672 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 RPAR+T+ Sbjct: 2071 RPARRTT 2077>XP_006722671 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 RPAR+T+ Sbjct: 2071 RPARRTT 2077>XP_006722670 Length = 2326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 RPAR+T+ Sbjct: 2094 RPARRTT 2100>XP_005259532 Length = 2327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 RPAR+T+ Sbjct: 2095 RPARRTT 2101>XP_005255481 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LARPARQTS 9 +A PA+QT+ Sbjct: 87 MAAPAQQTT 95>XP_005255479 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LARPARQTS 9 +A PA+QT+ Sbjct: 87 MAAPAQQTT 95>XP_006717199 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ARPARQT 8 ARP+R+T Sbjct: 57 ARPSRRT 63>XP_006712350 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LARPARQTS 9 L++P R+TS Sbjct: 172 LSQPLRETS 180>XP_006711490 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LARPARQTS 9 L+RP R+T+ Sbjct: 14 LSRPIRRTT 22>XP_006711489 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LARPARQTS 9 L+RP R+T+ Sbjct: 14 LSRPIRRTT 22>XP_005246008 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 +PAR+TS Sbjct: 915 KPARKTS 921>XP_005246007 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPARQTS 9 +PAR+TS Sbjct: 916 KPARKTS 922>NP_848606 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RPARQT 8 RP+RQT Sbjct: 123 RPSRQT 128Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.117 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 658,350 Number of extensions: 862 Number of successful extensions: 54 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |