Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_006710281 18 1935 XP_005263754 17 2528 NP_005180 17 3301 XP_006722203 17 3301 NP_612486 17 4312 NP_001271135 17 4312 NP_001271137 17 4312 NP_003852 17 4312 NP_001034749 17 4312 NP_001007562 17 4312 NP_001034748 17 4312 NP_001271136 17 4312 NP_071398 17 4312 XP_005258838 17 4312 XP_005258573 17 4312 XP_005258572 17 4312 XP_005254235 17 4312 XP_005254233 17 4312 XP_005254234 17 4312 XP_006720363 17 4312 XP_006720362 17 4312 XP_006720361 17 4312 XP_006720360 17 4312 XP_005273762 17 4312 NP_001138529 17 4312 NP_775904 17 4312 NP_766630 17 4312 NP_003039 16 5631 NP_004949 16 7355 NP_006477 16 7355 NP_003728 16 7355 NP_001138820 16 7355 NP_079049 16 7355 NP_665697 16 7355 XP_006721155 16 7355 XP_005253264 16 7355 XP_006716747 16 7355 XP_005272414 16 7355 XP_005263496 16 7355 XP_005263495 16 7355 NP_006152 16 7355 NP_061844 16 7355 NP_001166969 15 9605 NP_000519 15 9605 NP_061985 15 9605 NP_065861 15 9605 NP_001893 15 9605 NP_714964 15 9605 NP_001177392 15 9605 NP_066279 15 9605 NP_079157 15 9605 NP_786951 15 9605 XP_005259970 15 9605 XP_006722681 15 9605 XP_006722680 15 9605 XP_006722679 15 9605 XP_005267973 15 9605 XP_005264216 15 9605 XP_006710661 15 9605 XP_006710659 15 9605 XP_006710658 15 9605 XP_006710657 15 9605 NP_570603 15 9605 NP_055018 15 9605>XP_006710281 Length = 1303 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LALRAVLPP 9 L+LRA LPP Sbjct: 1172 LSLRAPLPP 1180>XP_005263754 Length = 1133 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LRAVLPP 9 +RAVLPP Sbjct: 966 MRAVLPP 972>NP_005180 Length = 532 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LA RAV PP Sbjct: 414 LASRAVAPP 422>XP_006722203 Length = 447 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LA RAV PP Sbjct: 329 LASRAVAPP 337>NP_612486 Length = 1227 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LALRAVLPP 9 LALR+ +PP Sbjct: 664 LALRSQVPP 672>NP_001271135 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LALR LPP Sbjct: 248 LALRRRLPP 256>NP_001271137 Length = 326 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LALR LPP Sbjct: 249 LALRRRLPP 257>NP_003852 Length = 942 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LALR LPP Sbjct: 249 LALRRRLPP 257>NP_001034749 Length = 194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 LRA LPP Sbjct: 172 LRATLPP 178>NP_001007562 Length = 623 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRAVLPP 9 ALR +LPP Sbjct: 174 ALRRLLPP 181>NP_001034748 Length = 194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 LRA LPP Sbjct: 172 LRATLPP 178>NP_001271136 Length = 860 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LALR LPP Sbjct: 167 LALRRRLPP 175>NP_071398 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 +ALRA PP Sbjct: 74 IALRAARPP 82>XP_005258838 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRAVLPP 9 ALR +LPP Sbjct: 8 ALRRLLPP 15>XP_005258573 Length = 623 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRAVLPP 9 ALR +LPP Sbjct: 174 ALRRLLPP 181>XP_005258572 Length = 623 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRAVLPP 9 ALR +LPP Sbjct: 174 ALRRLLPP 181>XP_005254235 Length = 1017 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LALRAVLPP 9 LALR+ +PP Sbjct: 665 LALRSQVPP 673>XP_005254233 Length = 1228 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LALRAVLPP 9 LALR+ +PP Sbjct: 665 LALRSQVPP 673>XP_005254234 Length = 1076 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LALRAVLPP 9 LALR+ +PP Sbjct: 665 LALRSQVPP 673>XP_006720363 Length = 894 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LALR LPP Sbjct: 166 LALRRRLPP 174>XP_006720362 Length = 895 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LALR LPP Sbjct: 167 LALRRRLPP 175>XP_006720361 Length = 976 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LALR LPP Sbjct: 248 LALRRRLPP 256>XP_006720360 Length = 977 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LALR LPP Sbjct: 249 LALRRRLPP 257>XP_005273762 Length = 194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 LRA LPP Sbjct: 172 LRATLPP 178>NP_001138529 Length = 194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 LRA LPP Sbjct: 172 LRATLPP 178>NP_775904 Length = 493 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRAVLPP 9 ALR +LPP Sbjct: 8 ALRRLLPP 15>NP_766630 Length = 194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 LRA LPP Sbjct: 172 LRATLPP 178>NP_003039 Length = 812 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRAVLPP 9 +LRA LPP Sbjct: 9 SLRAPLPP 16>NP_004949 Length = 2549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 +RA LPP Sbjct: 459 IRAALPP 465>NP_006477 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 LRA+ PP Sbjct: 618 LRAITPP 624>NP_003728 Length = 3298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALRAVLPP 9 A RA+ PP Sbjct: 3225 AARAIFPP 3232>NP_001138820 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALRAVLP 8 ALRA+LP Sbjct: 59 ALRALLP 65>NP_079049 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALRAVLP 8 ALRA+LP Sbjct: 21 ALRALLP 27>NP_665697 Length = 838 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LALRAVLPP 9 L LRA PP Sbjct: 606 LTLRAASPP 614>XP_006721155 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALRAVLP 8 ALRA+LP Sbjct: 32 ALRALLP 38>XP_005253264 Length = 3443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALRAVLPP 9 A RA+ PP Sbjct: 3370 AARAIFPP 3377>XP_006716747 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LALRAVLPP 9 L LRA PP Sbjct: 531 LTLRAASPP 539>XP_005272414 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LALRAVLPP 9 L LRA PP Sbjct: 606 LTLRAASPP 614>XP_005263496 Length = 2322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 +RA LPP Sbjct: 232 IRAALPP 238>XP_005263495 Length = 2549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 +RA LPP Sbjct: 459 IRAALPP 465>NP_006152 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALRAVLP 8 ALR+VLP Sbjct: 114 ALRSVLP 120>NP_061844 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LALRAVLPP 9 LAL A PP Sbjct: 150 LALAAAFPP 158>NP_001166969 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRAVLPP 9 ALR LPP Sbjct: 27 ALRPPLPP 34>NP_000519 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRAVLPP 9 ALR LPP Sbjct: 27 ALRPPLPP 34>NP_061985 Length = 2146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 LRA LPP Sbjct: 1495 LRAHLPP 1501>NP_065861 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LRAVLP 8 LRAVLP Sbjct: 186 LRAVLP 191>NP_001893 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAVLPP 9 RAV+PP Sbjct: 35 RAVVPP 40>NP_714964 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAVLPP 9 RAV+PP Sbjct: 35 RAVVPP 40>NP_001177392 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAVLPP 9 RAV+PP Sbjct: 35 RAVVPP 40>NP_066279 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ALRAVLP 8 ALR VLP Sbjct: 105 ALRGVLP 111>NP_079157 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALRAVLPP 9 LAL A LPP Sbjct: 67 LALCAGLPP 75>NP_786951 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALRAVLP 8 LAL+A LP Sbjct: 97 LALQAALP 104>XP_005259970 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRAVLPP 9 ALR LPP Sbjct: 27 ALRPPLPP 34>XP_006722681 Length = 1365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 LRA LPP Sbjct: 714 LRAHLPP 720>XP_006722680 Length = 1636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 LRA LPP Sbjct: 1495 LRAHLPP 1501>XP_006722679 Length = 2128 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRAVLPP 9 LRA LPP Sbjct: 1495 LRAHLPP 1501>XP_005267973 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LRAVLP 8 LRAVLP Sbjct: 214 LRAVLP 219>XP_005264216 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALRAVLP 8 LAL+A LP Sbjct: 97 LALQAALP 104>XP_006710661 Length = 4057 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRAVLPP 9 ALRA PP Sbjct: 1535 ALRAAPPP 1542>XP_006710659 Length = 4556 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRAVLPP 9 ALRA PP Sbjct: 1511 ALRAAPPP 1518>XP_006710658 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRAVLPP 9 ALRA PP Sbjct: 1518 ALRAAPPP 1525>XP_006710657 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRAVLPP 9 ALRA PP Sbjct: 1534 ALRAAPPP 1541>NP_570603 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LALRAVLPP 9 L LRA PP Sbjct: 661 LGLRAAPPP 669>NP_055018 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LALRAVLPP 9 L LRA PP Sbjct: 661 LGLRAAPPP 669Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.147 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 539,074 Number of extensions: 880 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |