Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1935 NP_001263689 18 1935 NP_001119584 18 1935 NP_001119586 18 1935 NP_001263625 18 1935 NP_001119590 18 1935 NP_001263690 18 1935 NP_001119585 18 1935 NP_001263624 18 1935 NP_001119588 18 1935 NP_001119587 18 1935 NP_001108451 18 1935 NP_001108454 18 1935 NP_001119589 18 1935 NP_003713 18 1935 NP_001108450 18 1935 NP_001108452 18 1935 NP_001108453 18 1935 NP_001191121 18 1935 NP_001119713 18 1935 NP_001191117 18 1935 NP_001119712 18 1935 NP_001119714 18 1935 NP_005418 18 1935 NP_001191116 18 1935 NP_001191115 18 1935 NP_001191119 18 1935 NP_001263627 18 1935 NP_001191113 18 1935 NP_001263628 18 1935 NP_001191118 18 1935 NP_001191120 18 1935 NP_001191114 18 1935 NP_001263626 18 1935 XP_005247903 18 1935 XP_005247901 18 1935 XP_005247900 18 1935 NP_001091997 16 5631 NP_001035519 16 5631 XP_005266415 16 5631 XP_005266414 16 5631 NP_976221 15 9605 NP_001230829 15 9605 NP_005327 15 9605 NP_001139811 15 9605 XP_006712539 15 9605 XP_005247059 15 9605 XP_005247058 15 9605 XP_006712538 15 9605 XP_005247060 15 9605 XP_005247057 15 9605>NP_000537 Length = 393 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 194 LIRVEGN 200>NP_001263689 Length = 354 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 155 LIRVEGN 161>NP_001119584 Length = 393 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 194 LIRVEGN 200>NP_001119586 Length = 341 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 194 LIRVEGN 200>NP_001263625 Length = 302 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 155 LIRVEGN 161>NP_001119590 Length = 354 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 155 LIRVEGN 161>NP_001263690 Length = 354 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 155 LIRVEGN 161>NP_001119585 Length = 346 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 194 LIRVEGN 200>NP_001263624 Length = 307 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 155 LIRVEGN 161>NP_001119588 Length = 209 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 62 LIRVEGN 68>NP_001119587 Length = 261 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 62 LIRVEGN 68>NP_001108451 Length = 487 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 264 LIRVEGN 270>NP_001108454 Length = 393 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 170 LIRVEGN 176>NP_001119589 Length = 214 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 62 LIRVEGN 68>NP_003713 Length = 680 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 264 LIRVEGN 270>NP_001108450 Length = 555 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 264 LIRVEGN 270>NP_001108452 Length = 586 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 170 LIRVEGN 176>NP_001108453 Length = 461 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 170 LIRVEGN 176>NP_001191121 Length = 565 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 143 LIRVEGN 149>NP_001119713 Length = 450 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 165 LIRVEGN 171>NP_001191117 Length = 540 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 214 LIRVEGN 220>NP_001119712 Length = 587 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 165 LIRVEGN 171>NP_001119714 Length = 426 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 165 LIRVEGN 171>NP_005418 Length = 636 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 214 LIRVEGN 220>NP_001191116 Length = 555 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 214 LIRVEGN 220>NP_001191115 Length = 403 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 214 LIRVEGN 220>NP_001191119 Length = 506 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 165 LIRVEGN 171>NP_001263627 Length = 182 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 35 LIRVEGN 41>NP_001191113 Length = 499 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 214 LIRVEGN 220>NP_001263628 Length = 187 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 35 LIRVEGN 41>NP_001191118 Length = 354 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 165 LIRVEGN 171>NP_001191120 Length = 491 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 165 LIRVEGN 171>NP_001191114 Length = 475 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 214 LIRVEGN 220>NP_001263626 Length = 234 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 35 LIRVEGN 41>XP_005247903 Length = 483 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 264 LIRVEGN 270>XP_005247901 Length = 663 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 247 LIRVEGN 253>XP_005247900 Length = 676 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRVEGN Sbjct: 264 LIRVEGN 270>NP_001091997 Length = 378 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LALIRVEG 8 L+LIR+EG Sbjct: 39 LSLIRLEG 46>NP_001035519 Length = 1159 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRV+GN Sbjct: 302 LIRVKGN 308>XP_005266415 Length = 1158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRV+GN Sbjct: 302 LIRVKGN 308>XP_005266414 Length = 1159 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIRV+GN Sbjct: 302 LIRVKGN 308>NP_976221 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIR+EG+ Sbjct: 480 LIRIEGD 486>NP_001230829 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIR+EG+ Sbjct: 447 LIRIEGD 453>NP_005327 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIR+EG+ Sbjct: 480 LIRIEGD 486>NP_001139811 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LALIRVEGN 9 ++ +RV+GN Sbjct: 98 ISTVRVQGN 106>XP_006712539 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIR+EG+ Sbjct: 480 LIRIEGD 486>XP_005247059 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIR+EG+ Sbjct: 480 LIRIEGD 486>XP_005247058 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIR+EG+ Sbjct: 480 LIRIEGD 486>XP_006712538 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIR+EG+ Sbjct: 480 LIRIEGD 486>XP_005247060 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIR+EG+ Sbjct: 480 LIRIEGD 486>XP_005247057 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIRVEGN 9 LIR+EG+ Sbjct: 480 LIRIEGD 486Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.146 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 505,786 Number of extensions: 707 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |