Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004786 18 1482 NP_006197 18 1935 XP_005265800 18 1935 XP_006714103 18 1935 XP_006714102 18 1935 NP_783864 17 3301 XP_005262701 17 3301 NP_001010938 17 4312 NP_005772 17 4312 XP_006713531 17 4312 XP_005269331 17 4312 XP_005269330 17 4312 XP_005269329 17 4312 XP_005269328 17 4312 XP_005269327 17 4312 XP_006713530 17 4312 XP_006713529 17 4312 XP_005269326 17 4312 XP_006713528 17 4312 XP_006713527 17 4312 XP_005269325 17 4312 XP_006713526 17 4312 XP_006713525 17 4312 XP_006713524 17 4312 XP_006713523 17 4312 NP_002011 16 5631 NP_891555 16 5631 NP_001070 16 5631 NP_065681 16 5631 NP_066124 16 5631 NP_997402 16 5631 NP_001167639 16 5631 NP_001167638 16 5631 NP_001128524 16 5631 NP_003168 16 5631 NP_002244 16 5631 NP_001973 16 5631 NP_061935 16 5631 NP_002010 16 5631 NP_003322 16 5631 NP_055897 16 5631 XP_006717999 16 5631 XP_005252204 16 5631 XP_006712792 16 5631 XP_006712791 16 5631 XP_005264072 16 5631 NP_006840 16 5631 NP_000213 16 7355 NP_001087241 16 7355 NP_001156909 16 7355 NP_001156908 16 7355 NP_001156907 16 7355 XP_006714482 16 7355 XP_005265799 16 7355 XP_005265798 16 7355 XP_005265797 16 7355 NP_004374 15 9605 NP_001120662 15 9605 NP_940980 15 9605 NP_002600 15 9605 NP_116164 15 9605 NP_057062 15 9605 NP_057111 15 9605 NP_001007562 15 9605 NP_001106279 15 9605 NP_001186256 15 9605 XP_006724406 15 9605 XP_006724405 15 9605 XP_005258573 15 9605 XP_005258572 15 9605 XP_005254222 15 9605 XP_005268686 15 9605 XP_005268521 15 9605>NP_004786 Length = 1012 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 L AHN+LLA Sbjct: 266 LVAHNLLLA 274>NP_006197 Length = 1089 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA NVLLA Sbjct: 819 LAARNVLLA 827>XP_005265800 Length = 1089 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA NVLLA Sbjct: 819 LAARNVLLA 827>XP_006714103 Length = 1111 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA NVLLA Sbjct: 841 LAARNVLLA 849>XP_006714102 Length = 1114 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA NVLLA Sbjct: 844 LAARNVLLA 852>NP_783864 Length = 1044 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AAHNVLLA 9 AAHN+L+A Sbjct: 711 AAHNLLVA 718>XP_005262701 Length = 1035 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AAHNVLLA 9 AAHN+L+A Sbjct: 702 AAHNLLVA 709>NP_001010938 Length = 1086 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 316 LAARNLLLA 324>NP_005772 Length = 1038 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 253 LAARNLLLA 261>XP_006713531 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 331 LAARNLLLA 339>XP_005269331 Length = 816 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 14 LAARNLLLA 22>XP_005269330 Length = 979 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 177 LAARNLLLA 185>XP_005269329 Length = 1040 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 285 LAARNLLLA 293>XP_005269328 Length = 1055 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 253 LAARNLLLA 261>XP_005269327 Length = 1055 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 253 LAARNLLLA 261>XP_006713530 Length = 1063 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 261 LAARNLLLA 269>XP_006713529 Length = 1085 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 331 LAARNLLLA 339>XP_005269326 Length = 1087 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 285 LAARNLLLA 293>XP_006713528 Length = 1101 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 331 LAARNLLLA 339>XP_006713527 Length = 1115 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 331 LAARNLLLA 339>XP_005269325 Length = 1118 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 316 LAARNLLLA 324>XP_006713526 Length = 1118 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 331 LAARNLLLA 339>XP_006713525 Length = 1119 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 317 LAARNLLLA 325>XP_006713524 Length = 1131 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 331 LAARNLLLA 339>XP_006713523 Length = 1133 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LLA Sbjct: 331 LAARNLLLA 339>NP_002011 Length = 1298 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LL+ Sbjct: 1038 LAARNILLS 1046>NP_891555 Length = 1363 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LL+ Sbjct: 1038 LAARNILLS 1046>NP_001070 Length = 619 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 462 LAARNVLL 469>NP_065681 Length = 1072 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+L+A Sbjct: 875 LAARNILVA 883>NP_066124 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+L+A Sbjct: 875 LAARNILVA 883>NP_997402 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 155 LAARNVLL 162>NP_001167639 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 472 LAARNVLL 479>NP_001167638 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 495 LAARNVLL 502>NP_001128524 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 472 LAARNVLL 479>NP_003168 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 495 LAARNVLL 502>NP_002244 Length = 1356 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LL+ Sbjct: 1029 LAARNILLS 1037>NP_001973 Length = 1342 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 835 LAARNVLL 842>NP_061935 Length = 227 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAAH +LLA Sbjct: 155 LAAHLLLLA 163>NP_002010 Length = 1338 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+LL+ Sbjct: 1023 LAARNILLS 1031>NP_003322 Length = 1187 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 1024 LAARNVLL 1031>NP_055897 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 L++HN LLA Sbjct: 55 LSSHNELLA 63>XP_006717999 Length = 1207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA N+L+A Sbjct: 968 LAARNILVA 976>XP_005252204 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 495 LAARNVLL 502>XP_006712792 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 155 LAARNVLL 162>XP_006712791 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 462 LAARNVLL 469>XP_005264072 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVLL Sbjct: 456 LAARNVLL 463>NP_006840 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LAAHNVLLA 9 LAAH LLA Sbjct: 287 LAAHRELLA 295>NP_000213 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA N+LL Sbjct: 793 LAARNILL 800>NP_001087241 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA N+LL Sbjct: 789 LAARNILL 796>NP_001156909 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 L+ HN+LL Sbjct: 117 LSPHNILL 124>NP_001156908 Length = 893 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 L+ HN+LL Sbjct: 117 LSPHNILL 124>NP_001156907 Length = 893 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 L+ HN+LL Sbjct: 117 LSPHNILL 124>XP_006714482 Length = 748 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 L+ HN+LL Sbjct: 117 LSPHNILL 124>XP_005265799 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA N+LL Sbjct: 790 LAARNILL 797>XP_005265798 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA N+LL Sbjct: 793 LAARNILL 800>XP_005265797 Length = 977 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA N+LL Sbjct: 794 LAARNILL 801>NP_004374 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA NVL++ Sbjct: 315 LAARNVLVS 323>NP_001120662 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA NVL++ Sbjct: 315 LAARNVLVS 323>NP_940980 Length = 2527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LAAHNVLL 8 L HNVLL Sbjct: 1995 LKPHNVLL 2002>NP_002600 Length = 1106 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVL+ Sbjct: 827 LAARNVLI 834>NP_116164 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAAHNVLLA 9 + AH +LLA Sbjct: 61 IEAHRILLA 69>NP_057062 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 L +HN+LL Sbjct: 589 LNSHNILL 596>NP_057111 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 +A HN+LL Sbjct: 256 MAKHNLLL 263>NP_001007562 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AAHNVLL 8 AAH VLL Sbjct: 596 AAHGVLL 602>NP_001106279 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 L +HN+LL Sbjct: 703 LNSHNILL 710>NP_001186256 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 L +HN+LL Sbjct: 703 LNSHNILL 710>XP_006724406 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAAHNVLLA 9 + AH +LLA Sbjct: 93 IEAHRILLA 101>XP_006724405 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAAHNVLLA 9 + AH +LLA Sbjct: 109 IEAHRILLA 117>XP_005258573 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AAHNVLL 8 AAH VLL Sbjct: 596 AAHGVLL 602>XP_005258572 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AAHNVLL 8 AAH VLL Sbjct: 596 AAHGVLL 602>XP_005254222 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAAHNVLLA 9 LAA NVL++ Sbjct: 315 LAARNVLVS 323>XP_005268686 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LAAHNVLL 8 L HNVLL Sbjct: 1995 LKPHNVLL 2002>XP_005268521 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAAHNVLL 8 LAA NVL+ Sbjct: 763 LAARNVLI 770Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.132 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 474,763 Number of extensions: 613 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |