Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001094387 18 1135 NP_068591 18 1135 XP_005268726 18 1135 XP_006719313 18 1135 NP_542401 17 3301 NP_004876 16 5631 NP_001138228 16 5631 NP_444264 16 5631 NP_001193856 16 5631 XP_006715067 16 5631 NP_001243000 16 7355 NP_008985 16 7355 XP_005257603 16 7355 XP_006722058 16 7355 XP_005257602 16 7355 XP_005271926 16 7355 XP_006714589 16 7355 XP_005271925 16 7355 NP_071881 15 9605 NP_001188457 15 9605 NP_001188458 15 9605 NP_002585 15 9605 NP_001071125 15 9605 NP_001177720 15 9605 NP_065995 15 9605 NP_001182149 15 9605 NP_065984 15 9605 XP_006722870 15 9605 XP_006716875 15 9605 XP_006716874 15 9605 XP_006716873 15 9605 XP_005251585 15 9605 XP_005251583 15 9605 XP_006716872 15 9605 XP_006716214 15 9605 XP_006716197 15 9605 XP_006716196 15 9605 XP_005249986 15 9605 XP_005269372 15 9605 XP_005264538 15 9605 XP_005264537 15 9605 XP_006712136 15 9605 NP_036388 15 9605 NP_003566 15 9605>NP_001094387 Length = 248 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KWTLMMALQ 9 KWT++ ALQ Sbjct: 140 KWTILNALQ 148>NP_068591 Length = 526 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KWTLMMALQ 9 +WTL+ ALQ Sbjct: 389 QWTLLQALQ 397>XP_005268726 Length = 248 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KWTLMMALQ 9 KWT++ ALQ Sbjct: 140 KWTILNALQ 148>XP_006719313 Length = 259 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KWTLMMALQ 9 KWT++ ALQ Sbjct: 151 KWTILNALQ 159>NP_542401 Length = 324 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KWTLMMAL 8 +WTLM+ L Sbjct: 18 RWTLMLLL 25>NP_004876 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 WTLMM 6 WTLMM Sbjct: 393 WTLMM 397>NP_001138228 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 WTLMM 6 WTLMM Sbjct: 294 WTLMM 298>NP_444264 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 WTLMM 6 WTLMM Sbjct: 291 WTLMM 295>NP_001193856 Length = 4707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 WTLMMAL 8 WTL MA+ Sbjct: 3490 WTLAMAI 3496>XP_006715067 Length = 4707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 WTLMMAL 8 WTL MA+ Sbjct: 3490 WTLAMAI 3496>NP_001243000 Length = 5207 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 WTLMMAL 8 W+LM+A+ Sbjct: 2683 WSLMLAI 2689>NP_008985 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 WTLMMA 7 WT++MA Sbjct: 550 WTMLMA 555>XP_005257603 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 WTLMMAL 8 W+LM+A+ Sbjct: 2732 WSLMLAI 2738>XP_006722058 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 WTLMMAL 8 W+LM+A+ Sbjct: 2732 WSLMLAI 2738>XP_005257602 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 WTLMMAL 8 W+LM+A+ Sbjct: 2732 WSLMLAI 2738>XP_005271926 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 WTLMMA 7 WT++MA Sbjct: 553 WTMLMA 558>XP_006714589 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 WTLMMA 7 WT++MA Sbjct: 577 WTMLMA 582>XP_005271925 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 WTLMMA 7 WT++MA Sbjct: 577 WTMLMA 582>NP_071881 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KWTLMMA 7 KW +M+A Sbjct: 460 KWQMMLA 466>NP_001188457 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KWTLMM 6 +WTLM+ Sbjct: 567 EWTLML 572>NP_001188458 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KWTLMM 6 +WTLM+ Sbjct: 551 EWTLML 556>NP_002585 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KWTLMM 6 +WTLM+ Sbjct: 586 EWTLML 591>NP_001071125 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 WTLMMALQ 9 WT + ALQ Sbjct: 60 WTAVRALQ 67>NP_001177720 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KWTLMM 6 KW+L+M Sbjct: 105 KWSLLM 110>NP_065995 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 WTLMMALQ 9 W + +ALQ Sbjct: 884 WAMQLALQ 891>NP_001182149 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 WTLMMALQ 9 WT++ A+Q Sbjct: 44 WTVVAAIQ 51>NP_065984 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KWTLMM 6 KW+L+M Sbjct: 137 KWSLLM 142>XP_006722870 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 KWTLMM 6 KW+L+M Sbjct: 137 KWSLLM 142>XP_006716875 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 WTLMMALQ 9 W + +ALQ Sbjct: 699 WAMQLALQ 706>XP_006716874 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 WTLMMALQ 9 W + +ALQ Sbjct: 733 WAMQLALQ 740>XP_006716873 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 WTLMMALQ 9 W + +ALQ Sbjct: 739 WAMQLALQ 746>XP_005251585 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 WTLMMALQ 9 W + +ALQ Sbjct: 811 WAMQLALQ 818>XP_005251583 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 WTLMMALQ 9 W + +ALQ Sbjct: 868 WAMQLALQ 875>XP_006716872 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 WTLMMALQ 9 W + +ALQ Sbjct: 890 WAMQLALQ 897>XP_006716214 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 WTLMMALQ 9 WT++ A+Q Sbjct: 99 WTVVAAIQ 106>XP_006716197 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 WTLMMALQ 9 WT++ A+Q Sbjct: 48 WTVVAAIQ 55>XP_006716196 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 WTLMMALQ 9 WT++ A+Q Sbjct: 48 WTVVAAIQ 55>XP_005249986 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 WTLMMALQ 9 WT++ A+Q Sbjct: 44 WTVVAAIQ 51>XP_005269372 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 WTLMMALQ 9 WT + ALQ Sbjct: 52 WTAVRALQ 59>XP_005264538 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KWTLMMA 7 KW +M+A Sbjct: 460 KWQMMLA 466>XP_005264537 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KWTLMMA 7 KW +M+A Sbjct: 460 KWQMMLA 466>XP_006712136 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KWTLMMA 7 KW +M+A Sbjct: 460 KWQMMLA 466>NP_036388 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 WTLMMALQ 9 WT++ A+Q Sbjct: 42 WTVVAAIQ 49>NP_003566 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 WTLMMALQ 9 WT++ A+Q Sbjct: 99 WTVVAAIQ 106Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.123 0.443 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 428,052 Number of extensions: 333 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |