Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 665 NP_444254 19 665 NP_444253 19 665 NP_444255 19 665 XP_005247551 19 665 XP_005247550 19 665 XP_006713712 19 665 XP_005247549 19 665 NP_115560 17 4312 XP_005271311 17 4312 XP_006711009 17 4312 XP_005271309 17 4312 XP_006711008 17 4312 NP_543146 17 4312 NP_740754 16 5631 NP_061336 16 5631 NP_001269439 16 5631 NP_036598 16 5631 NP_001269438 16 5631 NP_057062 16 7355 NP_001164629 16 7355 NP_001106279 16 7355 NP_001186256 16 7355 NP_001073946 15 9605 NP_001273001 15 9605 NP_001123551 15 9605 NP_001265424 15 9605 NP_722576 15 9605 NP_001107592 15 9605 NP_066014 15 9605 XP_005262424 15 9605 XP_005270192 15 9605 XP_005270168 15 9605 XP_006714321 15 9605 XP_006714320 15 9605 XP_006714319 15 9605 XP_006710707 15 9605 XP_005270926 15 9605 XP_005270927 15 9605 XP_005270925 15 9605 NP_006502 15 9605 NP_001092808 15 9605>NP_444256 Length = 1794 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 KVTGTQ IT Sbjct: 1191 KVTGTQPIT 1199>NP_444254 Length = 1845 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 KVTGTQ IT Sbjct: 1191 KVTGTQPIT 1199>NP_444253 Length = 1914 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 KVTGTQ IT Sbjct: 1260 KVTGTQPIT 1268>NP_444255 Length = 1863 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 KVTGTQ IT Sbjct: 1260 KVTGTQPIT 1268>XP_005247551 Length = 1855 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 KVTGTQ IT Sbjct: 1201 KVTGTQPIT 1209>XP_005247550 Length = 1856 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 KVTGTQ IT Sbjct: 1270 KVTGTQPIT 1278>XP_006713712 Length = 1923 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 KVTGTQ IT Sbjct: 1270 KVTGTQPIT 1278>XP_005247549 Length = 1924 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 KVTGTQ IT Sbjct: 1270 KVTGTQPIT 1278>NP_115560 Length = 1194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTGTQS 7 KVTGTQ+ Sbjct: 215 KVTGTQA 221>XP_005271311 Length = 1051 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTGTQS 7 KVTGTQ+ Sbjct: 412 KVTGTQA 418>XP_006711009 Length = 1108 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTGTQS 7 KVTGTQ+ Sbjct: 412 KVTGTQA 418>XP_005271309 Length = 1228 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTGTQS 7 KVTGTQ+ Sbjct: 412 KVTGTQA 418>XP_006711008 Length = 1262 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTGTQS 7 KVTGTQ+ Sbjct: 412 KVTGTQA 418>NP_543146 Length = 1393 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 KVTG +S+T Sbjct: 1247 KVTGDKSLT 1255>NP_740754 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTGTQSI 8 K+TGTQ I Sbjct: 326 KMTGTQPI 333>NP_061336 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTGTQSI 8 K+TGTQ I Sbjct: 326 KMTGTQPI 333>NP_001269439 Length = 219 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVTGTQSIT 9 K+T TQS T Sbjct: 184 KITKTQSFT 192>NP_036598 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVTGTQSIT 9 K+T TQS T Sbjct: 209 KITKTQSFT 217>NP_001269438 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVTGTQSIT 9 K+T TQS T Sbjct: 209 KITKTQSFT 217>NP_057062 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KVTGTQSIT 9 +++GT+S+T Sbjct: 291 QISGTESLT 299>NP_001164629 Length = 554 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVTGTQSIT 9 KVTGT+ T Sbjct: 138 KVTGTKPTT 146>NP_001106279 Length = 949 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KVTGTQSIT 9 +++GT+S+T Sbjct: 405 QISGTESLT 413>NP_001186256 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KVTGTQSIT 9 +++GT+S+T Sbjct: 405 QISGTESLT 413>NP_001073946 Length = 2699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTGTQSI 8 K+T TQSI Sbjct: 1019 KITMTQSI 1026>NP_001273001 Length = 947 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GTQSIT 9 GTQS+T Sbjct: 103 GTQSVT 108>NP_001123551 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GTQSIT 9 GTQS+T Sbjct: 159 GTQSVT 164>NP_001265424 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 +V+G QS+T Sbjct: 841 RVSGEQSLT 849>NP_722576 Length = 3080 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTGTQSIT 9 V+GT SIT Sbjct: 742 VSGTTSIT 749>NP_001107592 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTGTQSI 8 +TGTQS+ Sbjct: 583 LTGTQSL 589>NP_066014 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GTQSIT 9 GTQS+T Sbjct: 159 GTQSVT 164>XP_005262424 Length = 2875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTGTQSIT 9 V+GT SIT Sbjct: 537 VSGTTSIT 544>XP_005270192 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 +V+G QS+T Sbjct: 841 RVSGEQSLT 849>XP_005270168 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 +V+G QS+T Sbjct: 719 RVSGEQSLT 727>XP_006714321 Length = 2713 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTGTQSI 8 K+T TQSI Sbjct: 1034 KITMTQSI 1041>XP_006714320 Length = 2720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTGTQSI 8 K+T TQSI Sbjct: 1034 KITMTQSI 1041>XP_006714319 Length = 2721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTGTQSI 8 K+T TQSI Sbjct: 1034 KITMTQSI 1041>XP_006710707 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GTQSIT 9 GTQS+T Sbjct: 159 GTQSVT 164>XP_005270926 Length = 947 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GTQSIT 9 GTQS+T Sbjct: 103 GTQSVT 108>XP_005270927 Length = 947 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GTQSIT 9 GTQS+T Sbjct: 103 GTQSVT 108>XP_005270925 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GTQSIT 9 GTQS+T Sbjct: 159 GTQSVT 164>NP_006502 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVTGTQSIT 9 K+TGT S T Sbjct: 428 KLTGTSSDT 436>NP_001092808 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVTGTQSIT 9 +V+G QS+T Sbjct: 841 RVSGEQSLT 849Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.113 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 431,393 Number of extensions: 575 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |