Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_919047 20 299 XP_005250598 20 299 NP_036292 17 3301 NP_001265645 17 3301 XP_005266987 17 3301 XP_006715521 17 3301 NP_064592 16 5631 XP_005252384 16 5631 NP_002102 16 7355 NP_001196 16 7355 NP_053582 16 7355 NP_055026 16 7355 XP_006716419 16 7355 XP_005265931 16 7355 XP_005265930 16 7355 XP_005265929 16 7355 NP_001123543 15 9605 NP_001017928 15 9605 NP_001399 15 9605 NP_001361 15 9605 NP_006867 15 9605 XP_005258887 15 9605 XP_005258886 15 9605 XP_006723241 15 9605 XP_006723240 15 9605 XP_006723239 15 9605 XP_005247165 15 9605 XP_006712935 15 9605 XP_006712934 15 9605 XP_006712933 15 9605 XP_006712019 15 9605 XP_006710468 15 9605 XP_005270637 15 9605 NP_852118 15 9605 NP_001123544 15 9605 NP_037465 15 9605 NP_004482 15 9605>NP_919047 Length = 520 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KVSQTCKLA 9 KVS+TCKLA Sbjct: 364 KVSRTCKLA 372>XP_005250598 Length = 457 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KVSQTCKLA 9 KVS+TCKLA Sbjct: 301 KVSRTCKLA 309>NP_036292 Length = 621 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVSQTCKL 8 +++QTCKL Sbjct: 302 RLAQTCKL 309>NP_001265645 Length = 621 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVSQTCKL 8 +++QTCKL Sbjct: 302 RLAQTCKL 309>XP_005266987 Length = 597 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVSQTCKL 8 +++QTCKL Sbjct: 302 RLAQTCKL 309>XP_006715521 Length = 621 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVSQTCKL 8 +++QTCKL Sbjct: 302 RLAQTCKL 309>NP_064592 Length = 1561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KVSQTCKL 8 K+SQ C L Sbjct: 1333 KISQVCSL 1340>XP_005252384 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KVSQTCKL 8 K+SQ C L Sbjct: 613 KISQVCSL 620>NP_002102 Length = 3144 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SQTCKLA 9 S TCKLA Sbjct: 822 SVTCKLA 828>NP_001196 Length = 228 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KVSQTCKLA 9 K + TCK+A Sbjct: 97 KANLTCKIA 105>NP_053582 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KVSQTCKLA 9 K + TCK+A Sbjct: 140 KANLTCKIA 148>NP_055026 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SQTCKL 8 +QTCKL Sbjct: 171 TQTCKL 176>XP_006716419 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KVSQTCKL 8 K+SQ C L Sbjct: 600 KISQMCSL 607>XP_005265931 Length = 238 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SQTCKL 8 +QTCKL Sbjct: 171 TQTCKL 176>XP_005265930 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SQTCKL 8 +QTCKL Sbjct: 171 TQTCKL 176>XP_005265929 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SQTCKL 8 +QTCKL Sbjct: 92 TQTCKL 97>NP_001123543 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSQTCK 7 +VSQ CK Sbjct: 202 RVSQQCK 208>NP_001017928 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 SQTCK 7 SQTCK Sbjct: 50 SQTCK 54>NP_001399 Length = 2923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QTCKLA 9 Q+CKLA Sbjct: 146 QSCKLA 151>NP_001361 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSQTCK 7 KVS+ CK Sbjct: 2873 KVSKACK 2879>NP_006867 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KVSQTCKL 8 ++SQ C+L Sbjct: 349 RISQACEL 356>XP_005258887 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSQTCK 7 +VSQ CK Sbjct: 91 RVSQQCK 97>XP_005258886 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSQTCK 7 +VSQ CK Sbjct: 91 RVSQQCK 97>XP_006723241 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSQTCK 7 +VSQ CK Sbjct: 151 RVSQQCK 157>XP_006723240 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSQTCK 7 +VSQ CK Sbjct: 151 RVSQQCK 157>XP_006723239 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSQTCK 7 +VSQ CK Sbjct: 151 RVSQQCK 157>XP_005247165 Length = 130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 SQTCK 7 SQTCK Sbjct: 36 SQTCK 40>XP_006712935 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KVSQTC 6 +VSQTC Sbjct: 887 EVSQTC 892>XP_006712934 Length = 1583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KVSQTC 6 +VSQTC Sbjct: 783 EVSQTC 788>XP_006712933 Length = 1687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KVSQTC 6 +VSQTC Sbjct: 887 EVSQTC 892>XP_006712019 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSQTCK 7 KVS+ CK Sbjct: 2873 KVSKACK 2879>XP_006710468 Length = 2916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QTCKLA 9 Q+CKLA Sbjct: 146 QSCKLA 151>XP_005270637 Length = 2921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QTCKLA 9 Q+CKLA Sbjct: 146 QSCKLA 151>NP_852118 Length = 1684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KVSQTC 6 +VSQTC Sbjct: 884 EVSQTC 889>NP_001123544 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSQTCK 7 +VSQ CK Sbjct: 91 RVSQQCK 97>NP_037465 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSQTCK 7 +VSQ CK Sbjct: 91 RVSQQCK 97>NP_004482 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 SQTCK 7 SQTCK Sbjct: 806 SQTCK 810Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.117 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 510,951 Number of extensions: 336 Number of successful extensions: 37 Number of sequences better than 10000.0: 37 Number of HSP's gapped: 37 Number of HSP's successfully gapped: 37 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |