Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 20 509 NP_060785 20 509 NP_361014 20 509 NP_510966 16 5631 NP_001775 16 5631 NP_001020331 16 5631 NP_055747 16 5631 NP_001137419 16 5631 NP_061847 16 5631 XP_005260229 16 5631 XP_005260228 16 5631 XP_005260227 16 5631 XP_005247294 16 5631 XP_005247293 16 5631 XP_005247292 16 5631 XP_005247291 16 5631 XP_005247290 16 5631 XP_006713603 16 5631 XP_005247289 16 5631 NP_001153468 16 7355 NP_001153471 16 7355 NP_001153467 16 7355 NP_039254 16 7355 NP_001153480 16 7355 NP_039250 16 7355 NP_001153473 16 7355 NP_001153476 16 7355 NP_039258 16 7355 NP_039251 16 7355 NP_001127878 16 7355 NP_001127877 16 7355 NP_612147 16 7355 XP_006716398 16 7355 XP_005273544 16 7355 XP_005273543 16 7355 XP_005273542 16 7355 XP_005250215 16 7355 XP_005250214 16 7355 XP_005250213 16 7355 NP_001177203 15 9605 NP_079409 15 9605 NP_055820 15 9605 XP_005267607 15 9605 XP_005264631 15 9605 XP_005264630 15 9605 XP_005264629 15 9605>NP_001013433 Length = 589 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KVSEYTST 8 KVSEYTST Sbjct: 71 KVSEYTST 78>NP_060785 Length = 627 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KVSEYTST 8 KVSEYTST Sbjct: 109 KVSEYTST 116>NP_361014 Length = 707 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KVSEYTST 8 KVSEYTST Sbjct: 189 KVSEYTST 196>NP_510966 Length = 835 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVSEYTST 8 K SE+TST Sbjct: 809 KYSEFTST 816>NP_001775 Length = 742 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVSEYTST 8 K SE+TST Sbjct: 716 KYSEFTST 723>NP_001020331 Length = 786 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVSEYTST 8 K SE+TST Sbjct: 760 KYSEFTST 767>NP_055747 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSEYTST 8 +S+YTST Sbjct: 619 ISQYTST 625>NP_001137419 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVSEYTSTA 9 KVS+YT A Sbjct: 270 KVSQYTGRA 278>NP_061847 Length = 457 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVSEYTSTA 9 KVS+YT A Sbjct: 312 KVSQYTGRA 320>XP_005260229 Length = 801 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVSEYTST 8 K SE+TST Sbjct: 775 KYSEFTST 782>XP_005260228 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVSEYTST 8 K SE+TST Sbjct: 819 KYSEFTST 826>XP_005260227 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVSEYTST 8 K SE+TST Sbjct: 868 KYSEFTST 875>XP_005247294 Length = 671 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSEYTST 8 +S+YTST Sbjct: 467 ISQYTST 473>XP_005247293 Length = 814 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSEYTST 8 +S+YTST Sbjct: 610 ISQYTST 616>XP_005247292 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSEYTST 8 +S+YTST Sbjct: 619 ISQYTST 625>XP_005247291 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSEYTST 8 +S+YTST Sbjct: 619 ISQYTST 625>XP_005247290 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSEYTST 8 +S+YTST Sbjct: 630 ISQYTST 636>XP_006713603 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSEYTST 8 +S+YTST Sbjct: 639 ISQYTST 645>XP_005247289 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSEYTST 8 +S+YTST Sbjct: 639 ISQYTST 645>NP_001153468 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 181 SHYTSTA 187>NP_001153471 Length = 624 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 319 SHYTSTA 325>NP_001153467 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 302 SHYTSTA 308>NP_039254 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 335 SHYTSTA 341>NP_001153480 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 332 SHYTSTA 338>NP_039250 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 340 SHYTSTA 346>NP_001153473 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 285 SHYTSTA 291>NP_001153476 Length = 459 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 332 SHYTSTA 338>NP_039258 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 335 SHYTSTA 341>NP_039251 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 332 SHYTSTA 338>NP_001127878 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSEYTSTA 9 +SEY STA Sbjct: 138 LSEYISTA 145>NP_001127877 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSEYTSTA 9 +SEY STA Sbjct: 138 LSEYISTA 145>NP_612147 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSEYTSTA 9 +SEY STA Sbjct: 155 LSEYISTA 162>XP_006716398 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 115 SHYTSTA 121>XP_005273544 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 387 SHYTSTA 393>XP_005273543 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 390 SHYTSTA 396>XP_005273542 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEYTSTA 9 S YTSTA Sbjct: 395 SHYTSTA 401>XP_005250215 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSEYTSTA 9 +SEY STA Sbjct: 18 LSEYISTA 25>XP_005250214 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSEYTSTA 9 +SEY STA Sbjct: 24 LSEYISTA 31>XP_005250213 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSEYTSTA 9 +SEY STA Sbjct: 138 LSEYISTA 145>NP_001177203 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSEYTS 7 K+S YTS Sbjct: 838 KISSYTS 844>NP_079409 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSEYTS 7 K+S YTS Sbjct: 754 KISSYTS 760>NP_055820 Length = 1519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYTSTA 9 S+YTST+ Sbjct: 1185 SDYTSTS 1191>XP_005267607 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SEYTSTA 9 S+YTST+ Sbjct: 1255 SDYTSTS 1261>XP_005264631 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSEYTS 7 K+S YTS Sbjct: 837 KISSYTS 843>XP_005264630 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSEYTS 7 K+S YTS Sbjct: 837 KISSYTS 843>XP_005264629 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KVSEYTS 7 K+S YTS Sbjct: 838 KISSYTS 844Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.0974 0.224 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 399,535 Number of extensions: 241 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |