Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115548 17 2528 XP_005249940 17 2528 XP_005249939 17 2528 XP_006715854 17 2528 XP_006715853 17 2528 NP_001120666 17 4312 NP_001120667 17 4312 NP_001120668 17 4312 NP_001120665 17 4312 NP_003409 17 4312 NP_001120664 17 4312 NP_006659 17 4312 NP_001079990 17 4312 NP_005189 16 5631 NP_001077072 16 5631 NP_001077071 16 5631 NP_000255 16 5631 NP_055828 16 5631 NP_001009999 16 5631 NP_001269676 16 5631 NP_001269674 16 5631 NP_775104 16 5631 NP_569056 16 5631 NP_001193810 16 5631 NP_001093633 16 5631 NP_001093637 16 5631 NP_001092049 16 5631 XP_005252438 16 5631 XP_005252437 16 5631 XP_006710537 16 5631 XP_006710536 16 5631 XP_006710535 16 5631 XP_005245843 16 5631 NP_060836 16 5631 NP_001265526 16 7355 NP_001265525 16 7355 NP_694857 16 7355 NP_002758 16 7355 NP_001230865 16 7355 NP_001107018 16 7355 NP_001230871 16 7355 NP_001107019 16 7355 NP_079366 16 7355 NP_002757 16 7355 NP_001230869 16 7355 NP_001230704 16 7355 NP_057441 16 7355 NP_001230870 16 7355 XP_005257601 16 7355 XP_005257599 16 7355 XP_005257600 16 7355 XP_005256786 16 7355 XP_005256784 16 7355 XP_005256783 16 7355 XP_005256782 16 7355 XP_005256781 16 7355 XP_006719051 16 7355 XP_005267160 16 7355 NP_443187 16 7355 NP_055078 15 9605 NP_542987 15 9605 NP_001180299 15 9605 NP_149072 15 9605 NP_056011 15 9605 NP_001124479 15 9605 NP_057381 15 9605 NP_796374 15 9605 NP_001180298 15 9605 NP_036205 15 9605 NP_647473 15 9605 NP_001240795 15 9605 XP_006723747 15 9605 XP_005262928 15 9605 XP_005262927 15 9605 XP_005262926 15 9605>NP_115548 Length = 1316 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GGRIAKD 9 GG+IAKD Sbjct: 325 GGKIAKD 331>XP_005249940 Length = 737 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GGRIAKD 9 GG+IAKD Sbjct: 325 GGKIAKD 331>XP_005249939 Length = 1324 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GGRIAKD 9 GG+IAKD Sbjct: 325 GGKIAKD 331>XP_006715854 Length = 1327 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GGRIAKD 9 GG+IAKD Sbjct: 325 GGKIAKD 331>XP_006715853 Length = 1327 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GGRIAKD 9 GG+IAKD Sbjct: 325 GGKIAKD 331>NP_001120666 Length = 172 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GG IAKD Sbjct: 75 GGHIAKD 81>NP_001120667 Length = 171 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GG IAKD Sbjct: 74 GGHIAKD 80>NP_001120668 Length = 170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GG IAKD Sbjct: 73 GGHIAKD 79>NP_001120665 Length = 178 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GG IAKD Sbjct: 81 GGHIAKD 87>NP_003409 Length = 177 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GG IAKD Sbjct: 80 GGHIAKD 86>NP_001120664 Length = 179 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GG IAKD Sbjct: 82 GGHIAKD 88>NP_006659 Length = 500 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVGGRIAKD 9 +VGGR+ +D Sbjct: 54 EVGGRVLQD 62>NP_001079990 Length = 74 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GGRIAKD 9 GGR++KD Sbjct: 43 GGRLSKD 49>NP_005189 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VGGRIAKD 9 VGG +AKD Sbjct: 14 VGGCLAKD 21>NP_001077072 Length = 1446 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KVGGRIAKD 9 +VGGR++++ Sbjct: 130 EVGGRVSRE 138>NP_001077071 Length = 1381 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KVGGRIAKD 9 +VGGR++++ Sbjct: 65 EVGGRVSRE 73>NP_000255 Length = 1447 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KVGGRIAKD 9 +VGGR++++ Sbjct: 131 EVGGRVSRE 139>NP_055828 Length = 852 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KVGGRIA 7 +VGGR+A Sbjct: 312 RVGGRVA 318>NP_001009999 Length = 876 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KVGGRIA 7 +VGGR+A Sbjct: 332 RVGGRVA 338>NP_001269676 Length = 609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVGGRIAKD 9 K+GG+I K+ Sbjct: 491 KMGGKIPKE 499>NP_001269674 Length = 865 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVGGRIAKD 9 K+GG+I K+ Sbjct: 747 KMGGKIPKE 755>NP_775104 Length = 872 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVGGRIAKD 9 K+GG+I K+ Sbjct: 754 KMGGKIPKE 762>NP_569056 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVGGRIAK 8 K GG++AK Sbjct: 425 KAGGKLAK 432>NP_001193810 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVGGRIAK 8 K GG++AK Sbjct: 110 KAGGKLAK 117>NP_001093633 Length = 821 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVGGRIAK 8 K GG++AK Sbjct: 334 KAGGKLAK 341>NP_001093637 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVGGRIAK 8 K GG++AK Sbjct: 110 KAGGKLAK 117>NP_001092049 Length = 904 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVGGRIAK 8 K GG++AK Sbjct: 417 KAGGKLAK 424>XP_005252438 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVGGRIAKD 9 K+GG+I K+ Sbjct: 666 KMGGKIPKE 674>XP_005252437 Length = 807 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVGGRIAKD 9 K+GG+I K+ Sbjct: 689 KMGGKIPKE 697>XP_006710537 Length = 878 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KVGGRIA 7 +VGGR+A Sbjct: 332 RVGGRVA 338>XP_006710536 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KVGGRIA 7 +VGGR+A Sbjct: 332 RVGGRVA 338>XP_006710535 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KVGGRIA 7 +VGGR+A Sbjct: 312 RVGGRVA 318>XP_005245843 Length = 872 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KVGGRIA 7 +VGGR+A Sbjct: 332 RVGGRVA 338>NP_060836 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VGGRIAK 8 VGGR+A+ Sbjct: 145 VGGRVAR 151>NP_001265526 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KVGGRIAK 8 K GG IAK Sbjct: 213 KAGGSIAK 220>NP_001265525 Length = 1003 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KVGGRIAK 8 K GG IAK Sbjct: 217 KAGGSIAK 224>NP_694857 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GGR A+D Sbjct: 480 GGRFARD 486>NP_002758 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 260 VGGRIA 265>NP_001230865 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 220 VGGRIA 225>NP_001107018 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VGGRIAK 8 VGGR+A+ Sbjct: 627 VGGRVAE 633>NP_001230871 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 174 VGGRIA 179>NP_001107019 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VGGRIAK 8 VGGR+A+ Sbjct: 467 VGGRVAE 473>NP_079366 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GG+I KD Sbjct: 336 GGKITKD 342>NP_002757 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 276 VGGRIA 281>NP_001230869 Length = 320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 260 VGGRIA 265>NP_001230704 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VGGRIAK 8 VGGR+A+ Sbjct: 324 VGGRVAE 330>NP_057441 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VGGRIAK 8 VGGR+A+ Sbjct: 626 VGGRVAE 632>NP_001230870 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 174 VGGRIA 179>XP_005257601 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GG+I KD Sbjct: 336 GGKITKD 342>XP_005257599 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GG+I KD Sbjct: 336 GGKITKD 342>XP_005257600 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GG+I KD Sbjct: 336 GGKITKD 342>XP_005256786 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 174 VGGRIA 179>XP_005256784 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 174 VGGRIA 179>XP_005256783 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 260 VGGRIA 265>XP_005256782 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 260 VGGRIA 265>XP_005256781 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 VGGRIA Sbjct: 260 VGGRIA 265>XP_006719051 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KVGGRIAK 8 K GG IAK Sbjct: 216 KAGGSIAK 223>XP_005267160 Length = 573 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GGRIAKD 9 GGR A+D Sbjct: 547 GGRFARD 553>NP_443187 Length = 710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGGRIAKD 9 + G+IAKD Sbjct: 651 INGQIAKD 658>NP_055078 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VGGRIAKD 9 +GGR+A++ Sbjct: 598 MGGRVAEE 605>NP_542987 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 +GGRIA Sbjct: 1093 IGGRIA 1098>NP_001180299 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 +GGRIA Sbjct: 1093 IGGRIA 1098>NP_149072 Length = 2240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 +GGRIA Sbjct: 1093 IGGRIA 1098>NP_056011 Length = 1609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KVGGRI 6 KVGGR+ Sbjct: 728 KVGGRL 733>NP_001124479 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KVGGRI 6 KVGGR+ Sbjct: 729 KVGGRL 734>NP_057381 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KVGGRIA 7 +VGGR+A Sbjct: 70 EVGGRLA 76>NP_796374 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVGGRIAKD 9 KVGG A+D Sbjct: 226 KVGGSDAED 234>NP_001180298 Length = 2240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 +GGRIA Sbjct: 1093 IGGRIA 1098>NP_036205 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KVGGRI 6 KVGGR+ Sbjct: 214 KVGGRL 219>NP_647473 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VGGRIAKD 9 +GGR+A++ Sbjct: 655 MGGRVAEE 662>NP_001240795 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VGGRIAKD 9 +GGR+A++ Sbjct: 565 MGGRVAEE 572>XP_006723747 Length = 1240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VGGRIA 7 +GGRIA Sbjct: 1093 IGGRIA 1098>XP_005262928 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KVGGRI 6 KVGGR+ Sbjct: 84 KVGGRL 89>XP_005262927 Length = 1526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KVGGRI 6 KVGGR+ Sbjct: 645 KVGGRL 650>XP_005262926 Length = 1609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KVGGRI 6 KVGGR+ Sbjct: 729 KVGGRL 734Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.143 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 554,096 Number of extensions: 1032 Number of successful extensions: 75 Number of sequences better than 10000.0: 75 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |