Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001188326                                                           17    2528
XP_005266332                                                           17    2528
NP_002079                                                              17    3301
XP_006723233                                                           17    3301
XP_006723232                                                           17    3301
XP_005258879                                                           17    3301
XP_005258878                                                           17    3301
NP_115811                                                              17    4312
NP_940853                                                              17    4312
NP_001271160                                                           17    4312
NP_001271159                                                           17    4312
NP_149132                                                              17    4312
XP_006722997                                                           17    4312
XP_006720213                                                           17    4312
XP_006720212                                                           17    4312
XP_005267740                                                           17    4312
NP_056256                                                              16    5631
NP_878267                                                              16    5631
NP_878274                                                              16    5631
NP_057417                                                              16    5631
NP_258260                                                              16    5631
XP_006720937                                                           16    5631
XP_005255284                                                           16    5631
XP_005255283                                                           16    5631
XP_006720936                                                           16    5631
XP_006720935                                                           16    5631
XP_005255282                                                           16    5631
XP_006714867                                                           16    5631
XP_006714866                                                           16    5631
XP_005268581                                                           16    5631
XP_005246728                                                           16    5631
XP_005245133                                                           16    5631
XP_005245132                                                           16    5631
NP_612144                                                              16    5631
NP_000419                                                              16    7355
NP_001030024                                                           16    7355
NP_071420                                                              16    7355
NP_113654                                                              16    7355
NP_075252                                                              16    7355
NP_006035                                                              16    7355
NP_998812                                                              16    7355
NP_002002                                                              16    7355
NP_067009                                                              16    7355
NP_001229338                                                           16    7355
NP_056374                                                              16    7355
NP_060501                                                              16    7355
NP_004642                                                              16    7355
NP_073588                                                              16    7355
XP_005261644                                                           16    7355
XP_005272731                                                           16    7355
XP_005272625                                                           16    7355
XP_006724588                                                           16    7355
XP_005272623                                                           16    7355
XP_005272622                                                           16    7355
XP_005272621                                                           16    7355
XP_006722501                                                           16    7355
XP_005258301                                                           16    7355
XP_005258300                                                           16    7355
XP_005268053                                                           16    7355
XP_005268052                                                           16    7355
XP_005253953                                                           16    7355
XP_005271571                                                           16    7355
XP_005265895                                                           16    7355
XP_005265894                                                           16    7355
XP_005264894                                                           16    7355
NP_001139669                                                           16    7355
NP_005753                                                              16    7355
NP_859072                                                              16    7355
NP_066001                                                              15    9605
NP_003859                                                              15    9605
NP_002410                                                              15    9605
NP_667345                                                              15    9605
NP_001166143                                                           15    9605
NP_002495                                                              15    9605
NP_004641                                                              15    9605
NP_001135861                                                           15    9605
NP_667344                                                              15    9605
NP_037524                                                              15    9605
NP_001074011                                                           15    9605
NP_003578                                                              15    9605
NP_001165975                                                           15    9605
NP_056293                                                              15    9605
NP_001157711                                                           15    9605
XP_005259006                                                           15    9605
XP_005259005                                                           15    9605
XP_006721326                                                           15    9605
XP_005269205                                                           15    9605
XP_005269206                                                           15    9605
XP_005269204                                                           15    9605
XP_005269203                                                           15    9605
XP_006716839                                                           15    9605
XP_005251532                                                           15    9605
XP_005251531                                                           15    9605
XP_005251530                                                           15    9605
XP_006712062                                                           15    9605
XP_005264331                                                           15    9605
NP_002437                                                              15    9605
NP_076973                                                              15    9605
NP_001026886                                                           15    9605
>NP_001188326
          Length = 532

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  KTREGHRT 8
          K R GHRT
Sbjct: 76 KLRSGHRT 83
>XP_005266332
          Length = 426

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  KTREGHRT 8
          K R GHRT
Sbjct: 76 KLRSGHRT 83
>NP_002079
          Length = 980

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   KTREGHR 7
           K+R+GHR
Sbjct: 380 KSRQGHR 386
>XP_006723233
          Length = 912

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   KTREGHR 7
           K+R+GHR
Sbjct: 312 KSRQGHR 318
>XP_006723232
          Length = 981

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   KTREGHR 7
           K+R+GHR
Sbjct: 380 KSRQGHR 386
>XP_005258879
          Length = 942

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   KTREGHR 7
           K+R+GHR
Sbjct: 380 KSRQGHR 386
>XP_005258878
          Length = 980

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   KTREGHR 7
           K+R+GHR
Sbjct: 380 KSRQGHR 386
>NP_115811
          Length = 1036

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           RE HRTT
Sbjct: 294 REWHRTT 300
>NP_940853
          Length = 311

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TREGHR 7
           T+EGHR
Sbjct: 273 TKEGHR 278
>NP_001271160
          Length = 880

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  REGHRTT 9
          RE HRTT
Sbjct: 36 REWHRTT 42
>NP_001271159
          Length = 1104

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           RE HRTT
Sbjct: 299 REWHRTT 305
>NP_149132
          Length = 1118

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           RE HRTT
Sbjct: 299 REWHRTT 305
>XP_006722997
          Length = 325

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   KTREGHRT 8
           KTR  HRT
Sbjct: 280 KTRNQHRT 287
>XP_006720213
          Length = 933

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           RE HRTT
Sbjct: 103 REWHRTT 109
>XP_006720212
          Length = 956

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           RE HRTT
Sbjct: 103 REWHRTT 109
>XP_005267740
          Length = 1081

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           RE HRTT
Sbjct: 299 REWHRTT 305
>NP_056256
          Length = 750

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TREGHRT 8
           TR+GH T
Sbjct: 352 TRQGHST 358
>NP_878267
          Length = 647

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           K R+GHR
Sbjct: 272 KDRDGHR 278
>NP_878274
          Length = 316

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           + REGHR
Sbjct: 258 QAREGHR 264
>NP_057417
          Length = 2752

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   KTREGHRTT 9
           K+R  HR+T
Sbjct: 256 KSRRAHRST 264
>NP_258260
          Length = 690

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  REGHRT 8
          REGHR+
Sbjct: 67 REGHRS 72
>XP_006720937
          Length = 291

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   KTREGHRTT 9
           K+R  HR+T
Sbjct: 256 KSRRAHRST 264
>XP_005255284
          Length = 2581

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   KTREGHRTT 9
           K+R  HR+T
Sbjct: 256 KSRRAHRST 264
>XP_005255283
          Length = 2751

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   KTREGHRTT 9
           K+R  HR+T
Sbjct: 256 KSRRAHRST 264
>XP_006720936
          Length = 2751

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   KTREGHRTT 9
           K+R  HR+T
Sbjct: 255 KSRRAHRST 263
>XP_006720935
          Length = 2752

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   KTREGHRTT 9
           K+R  HR+T
Sbjct: 256 KSRRAHRST 264
>XP_005255282
          Length = 2752

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   KTREGHRTT 9
           K+R  HR+T
Sbjct: 256 KSRRAHRST 264
>XP_006714867
          Length = 632

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  REGHRT 8
          REGHR+
Sbjct: 67 REGHRS 72
>XP_006714866
          Length = 647

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  REGHRT 8
          REGHR+
Sbjct: 67 REGHRS 72
>XP_005268581
          Length = 688

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  REGHRT 8
          REGHR+
Sbjct: 67 REGHRS 72
>XP_005246728
          Length = 539

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           K R+GHR
Sbjct: 145 KDRDGHR 151
>XP_005245133
          Length = 751

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TREGHRT 8
           TR+GH T
Sbjct: 353 TRQGHST 359
>XP_005245132
          Length = 752

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TREGHRT 8
           TR+GH T
Sbjct: 354 TRQGHST 360
>NP_612144
          Length = 740

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   KTREGHRT 8
           K +EGH T
Sbjct: 519 KLKEGHET 526
>NP_000419
          Length = 1821

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 5    GHRTT 9
            GHRTT
Sbjct: 1601 GHRTT 1605
>NP_001030024
          Length = 435

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 5  GHRTT 9
          GHRTT
Sbjct: 26 GHRTT 30
>NP_071420
          Length = 434

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 5  GHRTT 9
          GHRTT
Sbjct: 26 GHRTT 30
>NP_113654
          Length = 1246

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3  REGHR 7
          REGHR
Sbjct: 59 REGHR 63
>NP_075252
          Length = 762

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   REGHR 7
           REGHR
Sbjct: 663 REGHR 667
>NP_006035
          Length = 1215

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           KTRE HR
Sbjct: 555 KTRELHR 561
>NP_998812
          Length = 802

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   REGHR 7
           REGHR
Sbjct: 703 REGHR 707
>NP_002002
          Length = 802

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   REGHR 7
           REGHR
Sbjct: 703 REGHR 707
>NP_067009
          Length = 540

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   TREGH 6
           TREGH
Sbjct: 190 TREGH 194
>NP_001229338
          Length = 876

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   REGHR 7
           REGHR
Sbjct: 266 REGHR 270
>NP_056374
          Length = 1596

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   KTREGHR 7
           K R GHR
Sbjct: 912 KNRHGHR 918
>NP_060501
          Length = 1151

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    TREGH 6
            TREGH
Sbjct: 1021 TREGH 1025
>NP_004642
          Length = 963

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           R+GH TT
Sbjct: 885 RDGHYTT 891
>NP_073588
          Length = 875

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   REGHR 7
           REGHR
Sbjct: 266 REGHR 270
>XP_005261644
          Length = 289

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3  REGHR 7
          REGHR
Sbjct: 64 REGHR 68
>XP_005272731
          Length = 690

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           R+GH TT
Sbjct: 612 RDGHYTT 618
>XP_005272625
          Length = 1215

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           KTRE HR
Sbjct: 555 KTRELHR 561
>XP_006724588
          Length = 1215

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           KTRE HR
Sbjct: 555 KTRELHR 561
>XP_005272623
          Length = 1215

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           KTRE HR
Sbjct: 555 KTRELHR 561
>XP_005272622
          Length = 1215

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           KTRE HR
Sbjct: 555 KTRELHR 561
>XP_005272621
          Length = 1261

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           KTRE HR
Sbjct: 601 KTRELHR 607
>XP_006722501
          Length = 1403

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   KTREGHR 7
           K R GHR
Sbjct: 912 KNRHGHR 918
>XP_005258301
          Length = 1539

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   KTREGHR 7
           K R GHR
Sbjct: 912 KNRHGHR 918
>XP_005258300
          Length = 1596

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   KTREGHR 7
           K R GHR
Sbjct: 912 KNRHGHR 918
>XP_005268053
          Length = 445

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 5  GHRTT 9
          GHRTT
Sbjct: 26 GHRTT 30
>XP_005268052
          Length = 446

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 5  GHRTT 9
          GHRTT
Sbjct: 26 GHRTT 30
>XP_005253953
          Length = 457

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3  REGHRT 8
          REGH T
Sbjct: 83 REGHHT 88
>XP_005271571
          Length = 261

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   TREGHR 7
           T EGHR
Sbjct: 223 TEEGHR 228
>XP_005265895
          Length = 802

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   REGHR 7
           REGHR
Sbjct: 703 REGHR 707
>XP_005265894
          Length = 834

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   REGHR 7
           REGHR
Sbjct: 735 REGHR 739
>XP_005264894
          Length = 1070

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   TREGH 6
           TREGH
Sbjct: 940 TREGH 944
>NP_001139669
          Length = 7081

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KTREGHRTT 9
           KT+ G RTT
Sbjct: 262 KTKLGSRTT 270
>NP_005753
          Length = 835

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   KTREGHRT 8
           K+R+G RT
Sbjct: 199 KSRDGERT 206
>NP_859072
          Length = 292

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   TREGHR 7
           T EGHR
Sbjct: 254 TEEGHR 259
>NP_066001
          Length = 1190

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 2   TREGHRT 8
           +R+GHR+
Sbjct: 401 SRDGHRS 407
>NP_003859
          Length = 207

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   REGHRT 8
           REG+RT
Sbjct: 172 REGYRT 177
>NP_002410
          Length = 847

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           RE H+TT
Sbjct: 272 REWHKTT 278
>NP_667345
          Length = 833

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           +EGHR T
Sbjct: 264 QEGHRHT 270
>NP_001166143
          Length = 166

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1  KTREGH 6
          KTRE H
Sbjct: 32 KTRENH 37
>NP_002495
          Length = 1120

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           +EGHR T
Sbjct: 264 QEGHRHT 270
>NP_004641
          Length = 253

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   KTREGH 6
           KTRE H
Sbjct: 119 KTRENH 124
>NP_001135861
          Length = 253

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   KTREGH 6
           KTRE H
Sbjct: 119 KTRENH 124
>NP_667344
          Length = 1024

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           +EGHR T
Sbjct: 264 QEGHRHT 270
>NP_037524
          Length = 535

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   KTREGHRT 8
           KT++ H+T
Sbjct: 164 KTKKNHKT 171
>NP_001074011
          Length = 1133

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   TREGHR 7
           TRE HR
Sbjct: 360 TREAHR 365
>NP_003578
          Length = 1041

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TREGHRT 8
           TR G+RT
Sbjct: 955 TRSGYRT 961
>NP_001165975
          Length = 628

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           KTR+G R
Sbjct: 612 KTRQGRR 618
>NP_056293
          Length = 772

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1 KTREGHRT 8
         + REGH T
Sbjct: 2 RRREGHGT 9
>NP_001157711
          Length = 981

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TREGHRT 8
           TR G+RT
Sbjct: 895 TRSGYRT 901
>XP_005259006
          Length = 718

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           RE H+TT
Sbjct: 253 REWHKTT 259
>XP_005259005
          Length = 719

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           RE H+TT
Sbjct: 253 REWHKTT 259
>XP_006721326
          Length = 628

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   KTREGHR 7
           KTR+G R
Sbjct: 612 KTRQGRR 618
>XP_005269205
          Length = 211

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  KTREGH 6
          KT++GH
Sbjct: 31 KTKDGH 36
>XP_005269206
          Length = 211

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  KTREGH 6
          KT++GH
Sbjct: 31 KTKDGH 36
>XP_005269204
          Length = 227

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  KTREGH 6
          KT++GH
Sbjct: 47 KTKDGH 52
>XP_005269203
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  KTREGH 6
          KT++GH
Sbjct: 74 KTKDGH 79
>XP_006716839
          Length = 833

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           +EGHR T
Sbjct: 264 QEGHRHT 270
>XP_005251532
          Length = 834

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           +EGHR T
Sbjct: 264 QEGHRHT 270
>XP_005251531
          Length = 1025

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           +EGHR T
Sbjct: 264 QEGHRHT 270
>XP_005251530
          Length = 1121

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           +EGHR T
Sbjct: 264 QEGHRHT 270
>XP_006712062
          Length = 271

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   KTREGHRT 8
           KT++ H+T
Sbjct: 164 KTKKNHKT 171
>XP_005264331
          Length = 535

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   KTREGHRT 8
           KT++ H+T
Sbjct: 164 KTKKNHKT 171
>NP_002437
          Length = 954

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   REGHRTT 9
           RE H+TT
Sbjct: 253 REWHKTT 259
>NP_076973
          Length = 211

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  KTREGH 6
          KT++GH
Sbjct: 31 KTKDGH 36
>NP_001026886
          Length = 204

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  KTREGH 6
          KT++GH
Sbjct: 35 KTKDGH 40
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.309    0.120    0.346 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 758,317
Number of extensions: 1373
Number of successful extensions: 99
Number of sequences better than 10000.0: 99
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 99
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.5 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package