Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 21 229 NP_060785 21 229 NP_361014 21 229 NP_000383 17 4312 NP_002660 17 4312 NP_001188493 17 4312 NP_031371 17 4312 XP_005266819 17 4312 XP_006722604 17 4312 XP_006717694 17 4312 XP_006717693 17 4312 NP_001191102 16 5631 NP_733827 16 5631 NP_001028750 16 5631 NP_037389 16 5631 NP_000375 16 7355 NP_001360 16 7355 NP_061985 16 7355 NP_733468 16 7355 NP_653091 16 7355 NP_001193658 16 7355 NP_859029 16 7355 NP_005456 16 7355 NP_002517 16 7355 NP_001041675 16 7355 NP_055942 16 7355 NP_001265132 16 7355 NP_001265131 16 7355 XP_006725026 16 7355 XP_006725024 16 7355 XP_006725023 16 7355 XP_006725022 16 7355 XP_006722681 16 7355 XP_006722680 16 7355 XP_006722679 16 7355 XP_005248319 16 7355 XP_006711789 16 7355 XP_006711788 16 7355 XP_005273052 16 7355 XP_005273051 16 7355 NP_001129057 15 9605 NP_003030 15 9605 NP_000848 15 9605 NP_001268663 15 9605 NP_067083 15 9605 NP_848535 15 9605 NP_001268664 15 9605 XP_005276416 15 9605 XP_005263016 15 9605 XP_006710899 15 9605 XP_005263548 15 9605>NP_001013433 Length = 589 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KTGEFIQNL 9 KTGEFI+NL Sbjct: 534 KTGEFIRNL 542>NP_060785 Length = 627 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KTGEFIQNL 9 KTGEFI+NL Sbjct: 572 KTGEFIRNL 580>NP_361014 Length = 707 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KTGEFIQNL 9 KTGEFI+NL Sbjct: 652 KTGEFIRNL 660>NP_000383 Length = 1545 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KTGEFIQNL 9 K GEF +NL Sbjct: 851 KKGEFAKNL 859>NP_002660 Length = 514 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GEFIQNL 9 G FIQNL Sbjct: 403 GSFIQNL 409>NP_001188493 Length = 505 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GEFIQNL 9 G FIQNL Sbjct: 394 GSFIQNL 400>NP_031371 Length = 1845 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 TG+F QNL Sbjct: 1317 TGQFDQNL 1324>XP_005266819 Length = 1790 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 TG+F QNL Sbjct: 1262 TGQFDQNL 1269>XP_006722604 Length = 1847 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 TG+F QNL Sbjct: 1319 TGQFDQNL 1326>XP_006717694 Length = 895 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KTGEFIQNL 9 K GEF +NL Sbjct: 851 KKGEFAKNL 859>XP_006717693 Length = 1313 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KTGEFIQNL 9 K GEF +NL Sbjct: 619 KKGEFAKNL 627>NP_001191102 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EFIQNL 9 EFIQNL Sbjct: 96 EFIQNL 101>NP_733827 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EFIQNL 9 EFIQNL Sbjct: 96 EFIQNL 101>NP_001028750 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EFIQNL 9 EFIQNL Sbjct: 96 EFIQNL 101>NP_037389 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EFIQNL 9 EFIQNL Sbjct: 96 EFIQNL 101>NP_000375 Length = 4563 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KTGEFIQN 8 K EFIQN Sbjct: 4358 KFNEFIQN 4365>NP_001360 Length = 4624 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEFIQNL 9 G F+QNL Sbjct: 3360 GNFLQNL 3366>NP_061985 Length = 2146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 +GE +QNL Sbjct: 1375 SGEVVQNL 1382>NP_733468 Length = 2342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KTGEFI 6 KTGEF+ Sbjct: 1593 KTGEFL 1598>NP_653091 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KTGEFI 6 KTGEF+ Sbjct: 1567 KTGEFL 1572>NP_001193658 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>NP_859029 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>NP_005456 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>NP_002517 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGEFIQ 7 TGEF+Q Sbjct: 446 TGEFLQ 451>NP_001041675 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 TGEFI+ L Sbjct: 319 TGEFIKAL 326>NP_055942 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 TGEFI+ L Sbjct: 269 TGEFIKAL 276>NP_001265132 Length = 366 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 TGEFI+ L Sbjct: 134 TGEFIKAL 141>NP_001265131 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 TGEFI+ L Sbjct: 198 TGEFIKAL 205>XP_006725026 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>XP_006725024 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>XP_006725023 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>XP_006725022 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>XP_006722681 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 +GE +QNL Sbjct: 594 SGEVVQNL 601>XP_006722680 Length = 1636 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 +GE +QNL Sbjct: 1375 SGEVVQNL 1382>XP_006722679 Length = 2128 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGEFIQNL 9 +GE +QNL Sbjct: 1375 SGEVVQNL 1382>XP_005248319 Length = 4609 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GEFIQNL 9 G F+QNL Sbjct: 3345 GNFLQNL 3351>XP_006711789 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>XP_006711788 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>XP_005273052 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>XP_005273051 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KTGEFIQN 8 K GE+I+N Sbjct: 14 KRGEYIKN 21>NP_001129057 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KTGEFIQN 8 +TGEF+++ Sbjct: 57 RTGEFMED 64>NP_003030 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KTGEFIQN 8 +TGEF+++ Sbjct: 57 RTGEFMED 64>NP_000848 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EFIQNL 9 EF+QNL Sbjct: 96 EFLQNL 101>NP_001268663 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KTGEFIQN 8 K GE +QN Sbjct: 666 KVGEAVQN 673>NP_067083 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KTGEFIQN 8 K GE +QN Sbjct: 680 KVGEAVQN 687>NP_848535 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KTGEFIQN 8 K GE +QN Sbjct: 265 KVGEAVQN 272>NP_001268664 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KTGEFIQN 8 K GE +QN Sbjct: 265 KVGEAVQN 272>XP_005276416 Length = 1583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGEFIQ 7 TGEFI+ Sbjct: 1416 TGEFIE 1421>XP_005263016 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EFIQNL 9 EF+QNL Sbjct: 28 EFLQNL 33>XP_006710899 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KTGEFIQN 8 +TGEF+++ Sbjct: 47 RTGEFMED 54>XP_005263548 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KTGEFIQN 8 +TGEF+++ Sbjct: 57 RTGEFMED 64Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.139 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 549,589 Number of extensions: 784 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |