Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 22 134 NP_055459 22 134 XP_006726410 22 134 XP_006711719 22 134 XP_006711716 22 134 XP_005273038 22 134 XP_006711164 22 134 NP_004474 18 1935 XP_003960941 18 1935 NP_056477 17 2528 XP_006712050 17 2528 XP_005264311 17 2528 XP_006712049 17 2528 NP_005520 17 3301 NP_006728 17 3301 NP_001229796 17 3301 NP_076991 17 3301 XP_006710661 17 3301 XP_005245920 17 3301 XP_006710660 17 3301 XP_006710659 17 3301 XP_006710658 17 3301 XP_006710657 17 3301 NP_065883 16 5631 NP_060382 16 5631 NP_258260 16 5631 NP_001158608 16 5631 XP_006714867 16 5631 XP_006714866 16 5631 XP_005268581 16 5631 XP_005263140 16 5631 XP_005245423 16 5631 XP_005245425 16 5631 NP_001697 16 7355 NP_001128210 16 7355 NP_001124317 16 7355 NP_001157915 16 7355 NP_114130 16 7355 XP_005267210 16 7355 XP_005247751 16 7355 NP_036581 15 9605 NP_006370 15 9605 NP_064581 15 9605 XP_005250170 15 9605>NP_001185761 Length = 2240 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSVRALPCT 9 KS+RALPCT Sbjct: 2229 KSLRALPCT 2237>NP_055459 Length = 2346 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSVRALPCT 9 KS+RALPCT Sbjct: 2335 KSLRALPCT 2343>XP_006726410 Length = 2087 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSVRALPCT 9 KS+RALPCT Sbjct: 2076 KSLRALPCT 2084>XP_006711719 Length = 2302 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSVRALPCT 9 KS+RALPCT Sbjct: 2291 KSLRALPCT 2299>XP_006711716 Length = 2411 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSVRALPCT 9 KS+RALPCT Sbjct: 2400 KSLRALPCT 2408>XP_005273038 Length = 2509 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSVRALPCT 9 KS+RALPCT Sbjct: 2498 KSLRALPCT 2506>XP_006711164 Length = 2087 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSVRALPCT 9 KS+RALPCT Sbjct: 2076 KSLRALPCT 2084>NP_004474 Length = 173 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KSVRALPCT 9 +SVRAL CT Sbjct: 7 RSVRALLCT 15>XP_003960941 Length = 173 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KSVRALPCT 9 +SVRAL CT Sbjct: 7 RSVRALLCT 15>NP_056477 Length = 1749 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRALPC 8 VRALPC Sbjct: 1681 VRALPC 1686>XP_006712050 Length = 1716 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRALPC 8 VRALPC Sbjct: 1648 VRALPC 1653>XP_005264311 Length = 1727 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRALPC 8 VRALPC Sbjct: 1659 VRALPC 1664>XP_006712049 Length = 1728 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRALPC 8 VRALPC Sbjct: 1660 VRALPC 1665>NP_005520 Length = 4391 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 SVR LPC Sbjct: 279 SVRPLPC 285>NP_006728 Length = 455 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 S RALPC Sbjct: 296 SFRALPC 302>NP_001229796 Length = 438 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 S RALPC Sbjct: 296 SFRALPC 302>NP_076991 Length = 562 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSVRALPCT 9 ++VRAL CT Sbjct: 50 EAVRALTCT 58>XP_006710661 Length = 4057 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 SVR LPC Sbjct: 296 SVRPLPC 302>XP_005245920 Length = 4392 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 SVR LPC Sbjct: 279 SVRPLPC 285>XP_006710660 Length = 4397 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 SVR LPC Sbjct: 279 SVRPLPC 285>XP_006710659 Length = 4556 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 SVR LPC Sbjct: 296 SVRPLPC 302>XP_006710658 Length = 4563 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 SVR LPC Sbjct: 279 SVRPLPC 285>XP_006710657 Length = 4579 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 SVR LPC Sbjct: 296 SVRPLPC 302>NP_065883 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVRALPC 8 KSV+ PC Sbjct: 988 KSVKKFPC 995>NP_060382 Length = 1022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VRALPC 8 +RALPC Sbjct: 466 LRALPC 471>NP_258260 Length = 690 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 + RALPC Sbjct: 465 ATRALPC 471>NP_001158608 Length = 986 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VRALPC 8 +RALPC Sbjct: 466 LRALPC 471>XP_006714867 Length = 632 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 + RALPC Sbjct: 465 ATRALPC 471>XP_006714866 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 + RALPC Sbjct: 422 ATRALPC 428>XP_005268581 Length = 688 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVRALPC 8 + RALPC Sbjct: 463 ATRALPC 469>XP_005263140 Length = 1034 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VRALPC 8 +RALPC Sbjct: 478 LRALPC 483>XP_005245423 Length = 1246 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVRALPC 8 KSV+ PC Sbjct: 997 KSVKKFPC 1004>XP_005245425 Length = 1299 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVRALPC 8 KSV+ PC Sbjct: 1050 KSVKKFPC 1057>NP_001697 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RALPC 8 RALPC Sbjct: 228 RALPC 232>NP_001128210 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RALPC 8 RALPC Sbjct: 228 RALPC 232>NP_001124317 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RALPC 8 RALPC Sbjct: 228 RALPC 232>NP_001157915 Length = 1873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVRALPC 8 KSV +PC Sbjct: 1657 KSVSVVPC 1664>NP_114130 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RALPC 8 RALPC Sbjct: 165 RALPC 169>XP_005267210 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RALPC 8 RALPC Sbjct: 165 RALPC 169>XP_005247751 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RALPC 8 RALPC Sbjct: 228 RALPC 232>NP_036581 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVRALPC 8 KS+ LPC Sbjct: 305 KSILFLPC 312>NP_006370 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVRALP 7 SVRALP Sbjct: 682 SVRALP 687>NP_064581 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVRALPCT 9 +++RALP T Sbjct: 135 RALRALPIT 143>XP_005250170 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVRALP 7 SVRALP Sbjct: 624 SVRALP 629Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.128 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 525,321 Number of extensions: 592 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |