Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276062 17 4312 NP_001002860 17 4312 XP_006725229 17 4312 XP_006720258 17 4312 NP_002307 16 5631 NP_001167617 16 5631 NP_001167618 16 5631 NP_001010872 16 5631 NP_112181 16 5631 NP_060587 16 5631 NP_068587 16 5631 NP_060646 16 5631 XP_005270021 16 5631 XP_005270020 16 5631 XP_005270019 16 5631 XP_006715085 16 5631 NP_001035858 16 7355 NP_057206 16 7355 NP_663747 16 7355 NP_008870 16 7355 NP_004437 16 7355 XP_005268078 16 7355 XP_005268999 16 7355 XP_006719500 16 7355 NP_060425 16 7355 NP_112224 15 9605 NP_065997 15 9605 NP_079096 15 9605 NP_001371 15 9605 NP_001277152 15 9605 NP_061159 15 9605 NP_001257293 15 9605 NP_001035088 15 9605 NP_940890 15 9605 NP_057270 15 9605 NP_036322 15 9605 NP_001257294 15 9605 NP_056466 15 9605 NP_056046 15 9605 NP_001094077 15 9605 NP_001273771 15 9605 NP_001273769 15 9605 NP_079216 15 9605 NP_000005 15 9605 NP_001029345 15 9605 XP_006725227 15 9605 XP_006725226 15 9605 XP_006725153 15 9605 XP_006725152 15 9605 XP_006725151 15 9605 XP_006725150 15 9605 XP_006720683 15 9605 XP_005254625 15 9605 XP_005254624 15 9605 XP_005267790 15 9605 XP_006720222 15 9605 XP_006719119 15 9605 XP_005253212 15 9605 XP_005253211 15 9605 XP_006717746 15 9605 XP_006717745 15 9605 XP_005252170 15 9605 XP_005252168 15 9605 XP_006717258 15 9605 XP_005252166 15 9605 XP_005251977 15 9605 XP_006717109 15 9605 XP_006717108 15 9605 XP_005251963 15 9605 XP_005250947 15 9605 XP_005250946 15 9605 XP_005250945 15 9605 XP_005250944 15 9605 XP_006716465 15 9605 XP_005273707 15 9605 XP_006713545 15 9605 XP_006713544 15 9605 XP_005265090 15 9605 XP_005265088 15 9605 NP_056281 15 9605 NP_473448 15 9605>NP_001276062 Length = 781 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KSVFTDVDS 9 +++FTD+DS Sbjct: 391 ETMFTDLDS 399>NP_001002860 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KSVFTDVDS 9 +++FTD+DS Sbjct: 742 ETMFTDLDS 750>XP_006725229 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KSVFTDVDS 9 +++FTD+DS Sbjct: 742 ETMFTDLDS 750>XP_006720258 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KSVFTDVDS 9 +++FTD+DS Sbjct: 742 ETMFTDLDS 750>NP_002307 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVFTDVDS 9 S+F D+DS Sbjct: 347 SIFHDIDS 354>NP_001167617 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVFTDVDS 9 S+F D+DS Sbjct: 358 SIFHDIDS 365>NP_001167618 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVFTDVDS 9 S+F D+DS Sbjct: 354 SIFHDIDS 361>NP_001010872 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 156 IFTDVD 161>NP_112181 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 VFTD+D Sbjct: 199 VFTDID 204>NP_060587 Length = 1224 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 VFTD+D Sbjct: 680 VFTDID 685>NP_068587 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KSVFTDVDS 9 K F DVDS Sbjct: 560 KEAFLDVDS 568>NP_060646 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 + VF+D+DS Sbjct: 150 RDVFSDLDS 158>XP_005270021 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 VFTD+D Sbjct: 209 VFTDID 214>XP_005270020 Length = 965 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 VFTD+D Sbjct: 421 VFTDID 426>XP_005270019 Length = 965 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 VFTD+D Sbjct: 421 VFTDID 426>XP_006715085 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 156 IFTDVD 161>NP_001035858 Length = 701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVFTDVDS 9 S FTD+D+ Sbjct: 4 STFTDMDT 11>NP_057206 Length = 701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVFTDVDS 9 S FTD+D+ Sbjct: 4 STFTDMDT 11>NP_663747 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 + +F+DVDS Sbjct: 178 EELFSDVDS 186>NP_008870 Length = 1332 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVFTDVD 8 SVF DVD Sbjct: 1101 SVFLDVD 1107>NP_004437 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VFTDVDS 9 +FTDV+S Sbjct: 47 IFTDVNS 53>XP_005268078 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVFTDVD 8 SVF DVD Sbjct: 1041 SVFLDVD 1047>XP_005268999 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVFTDVDS 9 S FTD+D+ Sbjct: 4 STFTDMDT 11>XP_006719500 Length = 701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVFTDVDS 9 S FTD+D+ Sbjct: 4 STFTDMDT 11>NP_060425 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 + +F+DVDS Sbjct: 178 EELFSDVDS 186>NP_112224 Length = 1849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFTDVDS 9 V TD+DS Sbjct: 69 VLTDIDS 75>NP_065997 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFTDVDS 9 V TD+DS Sbjct: 74 VLTDIDS 80>NP_079096 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFTDVDS 9 V TD+DS Sbjct: 74 VLTDIDS 80>NP_001371 Length = 1865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++VFTD+ S Sbjct: 279 RAVFTDLGS 287>NP_001277152 Length = 1886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++VFTD+ S Sbjct: 279 RAVFTDLGS 287>NP_061159 Length = 1361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVFTDVD 8 SVF DVD Sbjct: 956 SVFHDVD 962>NP_001257293 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SVFTDVD 8 +VFTDV+ Sbjct: 799 TVFTDVE 805>NP_001035088 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 182 MFTDVD 187>NP_940890 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 157 MFTDVD 162>NP_057270 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VFTDVDS 9 VFT+VD+ Sbjct: 249 VFTEVDT 255>NP_036322 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SVFTDVD 8 +VFTDV+ Sbjct: 789 TVFTDVE 795>NP_001257294 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SVFTDVD 8 +VFTDV+ Sbjct: 688 TVFTDVE 694>NP_056466 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++ F+DVDS Sbjct: 440 QTFFSDVDS 448>NP_056046 Length = 1436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KSVFTDV 7 +S+FTD+ Sbjct: 184 QSIFTDI 190>NP_001094077 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VFTDVDS 9 VFT+VD+ Sbjct: 249 VFTEVDT 255>NP_001273771 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++ F+DVDS Sbjct: 231 QTFFSDVDS 239>NP_001273769 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++ F+DVDS Sbjct: 459 QTFFSDVDS 467>NP_079216 Length = 1870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++VFTD+ S Sbjct: 278 QAVFTDLSS 286>NP_000005 Length = 1474 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KSVFTDVDS 9 +S+FTD+++ Sbjct: 71 RSLFTDLEA 79>NP_001029345 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SVFTDVD 8 +VFTDV+ Sbjct: 810 TVFTDVE 816>XP_006725227 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VFTDVDS 9 VFT+VD+ Sbjct: 249 VFTEVDT 255>XP_006725226 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VFTDVDS 9 VFT+VD+ Sbjct: 289 VFTEVDT 295>XP_006725153 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 157 MFTDVD 162>XP_006725152 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 157 MFTDVD 162>XP_006725151 Length = 1185 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 163 MFTDVD 168>XP_006725150 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 176 MFTDVD 181>XP_006720683 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVFTDVD 8 SVF DVD Sbjct: 399 SVFHDVD 405>XP_005254625 Length = 1361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVFTDVD 8 SVF DVD Sbjct: 956 SVFHDVD 962>XP_005254624 Length = 1361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVFTDVD 8 SVF DVD Sbjct: 956 SVFHDVD 962>XP_005267790 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VFTDVDS 9 VFT+VD+ Sbjct: 249 VFTEVDT 255>XP_006720222 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VFTDVDS 9 VFT+VD+ Sbjct: 289 VFTEVDT 295>XP_006719119 Length = 1512 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KSVFTDVDS 9 +S+FTD+++ Sbjct: 71 RSLFTDLEA 79>XP_005253212 Length = 1838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFTDVDS 9 V TD+DS Sbjct: 69 VLTDIDS 75>XP_005253211 Length = 1881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFTDVDS 9 V TD+DS Sbjct: 69 VLTDIDS 75>XP_006717746 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++VFTD+ S Sbjct: 279 RAVFTDLGS 287>XP_006717745 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++VFTD+ S Sbjct: 279 RAVFTDLGS 287>XP_005252170 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFTDVDS 9 V TD+DS Sbjct: 89 VLTDIDS 95>XP_005252168 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFTDVDS 9 V TD+DS Sbjct: 89 VLTDIDS 95>XP_006717258 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFTDVDS 9 V TD+DS Sbjct: 89 VLTDIDS 95>XP_005252166 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFTDVDS 9 V TD+DS Sbjct: 74 VLTDIDS 80>XP_005251977 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FTDVDS 9 FTD+DS Sbjct: 107 FTDLDS 112>XP_006717109 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++ F+DVDS Sbjct: 267 QTFFSDVDS 275>XP_006717108 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++ F+DVDS Sbjct: 440 QTFFSDVDS 448>XP_005251963 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++ F+DVDS Sbjct: 440 QTFFSDVDS 448>XP_005250947 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 157 MFTDVD 162>XP_005250946 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 157 MFTDVD 162>XP_005250945 Length = 1185 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 163 MFTDVD 168>XP_005250944 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VFTDVD 8 +FTDVD Sbjct: 176 MFTDVD 181>XP_006716465 Length = 1826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++VFTD+ S Sbjct: 278 QAVFTDLSS 286>XP_005273707 Length = 1847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVFTDVDS 9 ++VFTD+ S Sbjct: 278 QAVFTDLSS 286>XP_006713545 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SVFTDVD 8 +VFTDV+ Sbjct: 787 TVFTDVE 793>XP_006713544 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SVFTDVD 8 +VFTDV+ Sbjct: 789 TVFTDVE 795>XP_005265090 Length = 1510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VFTDVDS 9 VFTDV++ Sbjct: 322 VFTDVEA 328>XP_005265088 Length = 1694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VFTDVDS 9 VFTDV++ Sbjct: 506 VFTDVEA 512>NP_056281 Length = 1636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VFTDVDS 9 VFTDV++ Sbjct: 448 VFTDVEA 454>NP_473448 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FTDVDS 9 FTD+DS Sbjct: 107 FTDLDS 112Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.124 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 465,216 Number of extensions: 751 Number of successful extensions: 81 Number of sequences better than 10000.0: 81 Number of HSP's gapped: 81 Number of HSP's successfully gapped: 81 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |