Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 869 XP_006718908 19 869 XP_005271621 19 869 XP_006718907 19 869 XP_006718906 19 869 XP_005271619 19 869 XP_005271618 19 869 NP_006538 17 4312 NP_775774 17 4312 XP_006715702 17 4312 XP_006715701 17 4312 NP_001138405 17 4312 NP_775859 16 5631 NP_000581 16 7355 NP_644671 16 7355 NP_009330 16 7355 NP_000405 16 7355 NP_001186221 16 7355 NP_001186220 16 7355 NP_001269961 16 7355 NP_001269960 16 7355 NP_001269962 16 7355 NP_057190 16 7355 NP_878255 16 7355 NP_001244305 16 7355 XP_005267526 16 7355 XP_006712781 16 7355 NP_006493 15 9605 NP_001254514 15 9605 NP_001254515 15 9605 XP_006721485 15 9605 XP_006721484 15 9605 XP_006721483 15 9605 XP_006715181 15 9605 XP_005249243 15 9605>NP_000042 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSILEIISK 9 KSILEI+SK Sbjct: 1402 KSILEILSK 1410>XP_006718908 Length = 1708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSILEIISK 9 KSILEI+SK Sbjct: 54 KSILEILSK 62>XP_005271621 Length = 2708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSILEIISK 9 KSILEI+SK Sbjct: 1054 KSILEILSK 1062>XP_006718907 Length = 3050 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSILEIISK 9 KSILEI+SK Sbjct: 1396 KSILEILSK 1404>XP_006718906 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSILEIISK 9 KSILEI+SK Sbjct: 1402 KSILEILSK 1410>XP_005271619 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSILEIISK 9 KSILEI+SK Sbjct: 1402 KSILEILSK 1410>XP_005271618 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSILEIISK 9 KSILEI+SK Sbjct: 1402 KSILEILSK 1410>NP_006538 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KSILEIISK 9 KSILEI+ K Sbjct: 258 KSILEIMHK 266>NP_775774 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSILEIIS 8 KSI+EI+S Sbjct: 156 KSIIEIVS 163>XP_006715702 Length = 422 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KSILEIISK 9 KSILEI+ K Sbjct: 101 KSILEIMHK 109>XP_006715701 Length = 527 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KSILEIISK 9 KSILEI+ K Sbjct: 258 KSILEIMHK 266>NP_001138405 Length = 490 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSILEIIS 8 KSI+EI+S Sbjct: 208 KSIIEIVS 215>NP_775859 Length = 1326 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSILEIISK 9 K +LEI+SK Sbjct: 189 KEMLEILSK 197>NP_000581 Length = 144 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSILEIISK 9 KS+LEI K Sbjct: 126 KSLLEIFQK 134>NP_644671 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSILEIISK 9 +SILE+I K Sbjct: 559 ESILELIKK 567>NP_009330 Length = 750 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSILEIISK 9 +SILE+I K Sbjct: 559 ESILELIKK 567>NP_000405 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SILEIISK 9 SI+E++SK Sbjct: 294 SIIEVLSK 301>NP_001186221 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SILEIISK 9 SI+E++SK Sbjct: 276 SIIEVLSK 283>NP_001186220 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SILEIISK 9 SI+E++SK Sbjct: 319 SIIEVLSK 326>NP_001269961 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSILEIIS 8 KS+L+IIS Sbjct: 377 KSLLDIIS 384>NP_001269960 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSILEIIS 8 KS+L+IIS Sbjct: 251 KSLLDIIS 258>NP_001269962 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSILEIIS 8 KS+L+IIS Sbjct: 251 KSLLDIIS 258>NP_057190 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSILEIIS 8 KS+L+IIS Sbjct: 436 KSLLDIIS 443>NP_878255 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSILEIIS 8 KS+L+IIS Sbjct: 369 KSLLDIIS 376>NP_001244305 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSILEIIS 8 KS+L+IIS Sbjct: 344 KSLLDIIS 351>XP_005267526 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSILEIIS 8 KS+L+IIS Sbjct: 411 KSLLDIIS 418>XP_006712781 Length = 750 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSILEIISK 9 +SILE+I K Sbjct: 559 ESILELIKK 567>NP_006493 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSILEIISK 9 KS+LE+ K Sbjct: 611 KSVLEVTQK 619>NP_001254514 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SILEIISK 9 S++EI+SK Sbjct: 711 SLMEILSK 718>NP_001254515 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SILEIISK 9 S++EI+SK Sbjct: 658 SLMEILSK 665>XP_006721485 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SILEIISK 9 S++EI+SK Sbjct: 711 SLMEILSK 718>XP_006721484 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SILEIISK 9 S++EI+SK Sbjct: 656 SLMEILSK 663>XP_006721483 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SILEIISK 9 S++EI+SK Sbjct: 740 SLMEILSK 747>XP_006715181 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSILEIISK 9 KS+LE+ K Sbjct: 459 KSVLEVTQK 467>XP_005249243 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSILEIISK 9 KS+LE+ K Sbjct: 549 KSVLEVTQK 557Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.133 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 363,876 Number of extensions: 456 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |