Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000542 19 665 NP_937799 19 665 NP_001006635 17 4312 NP_060524 17 4312 XP_006721123 17 4312 XP_005255471 17 4312 XP_006721121 17 4312 XP_005255470 17 4312 XP_006721120 17 4312 NP_004256 16 5631 NP_001268430 16 5631 NP_001268431 16 5631 NP_060525 16 5631 NP_060493 16 5631 XP_006713751 16 5631 XP_005247655 16 5631 XP_005247654 16 5631 NP_061178 16 5631 NP_660312 16 7355 NP_001269963 16 7355 XP_006716569 16 7355 XP_005250844 16 7355 XP_005250843 16 7355 XP_005250841 16 7355 XP_005250840 16 7355 NP_001171921 15 9605 NP_115698 15 9605 NP_922921 15 9605 NP_055476 15 9605 NP_001138830 15 9605 NP_001138829 15 9605 NP_056292 15 9605 NP_002800 15 9605 NP_056075 15 9605 NP_055553 15 9605 NP_068373 15 9605 XP_006722767 15 9605 XP_005259889 15 9605 XP_005257925 15 9605 XP_005257924 15 9605 XP_005257923 15 9605 XP_005257922 15 9605 XP_005257921 15 9605 XP_006722263 15 9605 XP_005257920 15 9605 XP_006722201 15 9605 XP_006720530 15 9605 XP_006720529 15 9605 XP_006720528 15 9605>NP_000542 Length = 213 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KRLDIVRSL 9 +RLDIVRSL Sbjct: 176 RRLDIVRSL 184>NP_937799 Length = 172 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KRLDIVRSL 9 +RLDIVRSL Sbjct: 135 RRLDIVRSL 143>NP_001006635 Length = 881 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 +RLD VRS+ Sbjct: 34 RRLDTVRSI 42>NP_060524 Length = 803 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 +RLD VRS+ Sbjct: 34 RRLDTVRSI 42>XP_006721123 Length = 775 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 +RLD VRS+ Sbjct: 34 RRLDTVRSI 42>XP_005255471 Length = 840 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 +RLD VRS+ Sbjct: 34 RRLDTVRSI 42>XP_006721121 Length = 853 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 +RLD VRS+ Sbjct: 34 RRLDTVRSI 42>XP_005255470 Length = 853 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 +RLD VRS+ Sbjct: 34 RRLDTVRSI 42>XP_006721120 Length = 880 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 +RLD VRS+ Sbjct: 33 RRLDTVRSI 41>NP_004256 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LDI+RSL Sbjct: 424 LDIIRSL 430>NP_001268430 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LDI+RSL Sbjct: 402 LDIIRSL 408>NP_001268431 Length = 413 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LDI+RSL Sbjct: 393 LDIIRSL 399>NP_060525 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLDIVRSL 9 R DI+RSL Sbjct: 54 RADIIRSL 61>NP_060493 Length = 1422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 KR+DI+ +L Sbjct: 299 KRIDIIHNL 307>XP_006713751 Length = 1423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 KR+DI+ +L Sbjct: 299 KRIDIIHNL 307>XP_005247655 Length = 1423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 KR+DI+ +L Sbjct: 299 KRIDIIHNL 307>XP_005247654 Length = 1423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRLDIVRSL 9 KR+DI+ +L Sbjct: 299 KRIDIIHNL 307>NP_061178 Length = 669 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LD+VRSL Sbjct: 96 LDVVRSL 102>NP_660312 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLDIVRS 8 RLDIVR+ Sbjct: 233 RLDIVRA 239>NP_001269963 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLDIVRS 8 RLDIVR+ Sbjct: 195 RLDIVRA 201>XP_006716569 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLDIVRS 8 RLDIVR+ Sbjct: 233 RLDIVRA 239>XP_005250844 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLDIVRS 8 RLDIVR+ Sbjct: 163 RLDIVRA 169>XP_005250843 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLDIVRS 8 RLDIVR+ Sbjct: 171 RLDIVRA 177>XP_005250841 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLDIVRS 8 RLDIVR+ Sbjct: 203 RLDIVRA 209>XP_005250840 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLDIVRS 8 RLDIVR+ Sbjct: 241 RLDIVRA 247>NP_001171921 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 +DIVRSL Sbjct: 146 VDIVRSL 152>NP_115698 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 +DIVRSL Sbjct: 146 VDIVRSL 152>NP_922921 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 +DIVRSL Sbjct: 146 VDIVRSL 152>NP_055476 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLDIVRSL 9 RLD+ RSL Sbjct: 222 RLDLQRSL 229>NP_001138830 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LD+VRSL Sbjct: 963 LDMVRSL 969>NP_001138829 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LD+VRSL Sbjct: 963 LDMVRSL 969>NP_056292 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LD+VRSL Sbjct: 963 LDMVRSL 969>NP_002800 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLDIVRS 8 +LD+VRS Sbjct: 223 KLDVVRS 229>NP_056075 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LD+VRSL Sbjct: 852 LDMVRSL 858>NP_055553 Length = 1356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLDIVR 7 RLDIVR Sbjct: 834 RLDIVR 839>NP_068373 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 +DIVRSL Sbjct: 425 VDIVRSL 431>XP_006722767 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LD+VRSL Sbjct: 335 LDMVRSL 341>XP_005259889 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LD+VRSL Sbjct: 820 LDMVRSL 826>XP_005257925 Length = 850 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLDIVR 7 RLDIVR Sbjct: 298 RLDIVR 303>XP_005257924 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLDIVR 7 RLDIVR Sbjct: 570 RLDIVR 575>XP_005257923 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLDIVR 7 RLDIVR Sbjct: 579 RLDIVR 584>XP_005257922 Length = 1366 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLDIVR 7 RLDIVR Sbjct: 844 RLDIVR 849>XP_005257921 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLDIVR 7 RLDIVR Sbjct: 848 RLDIVR 853>XP_006722263 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLDIVR 7 RLDIVR Sbjct: 838 RLDIVR 843>XP_005257920 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLDIVR 7 RLDIVR Sbjct: 838 RLDIVR 843>XP_006722201 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 +DIVRSL Sbjct: 39 VDIVRSL 45>XP_006720530 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LD+VRSL Sbjct: 963 LDMVRSL 969>XP_006720529 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LD+VRSL Sbjct: 963 LDMVRSL 969>XP_006720528 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDIVRSL 9 LD+VRSL Sbjct: 963 LDMVRSL 969Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.150 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 375,814 Number of extensions: 444 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |